RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 CTDP1Q9Y5B0 961 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC4-203ENST00000447216 PRPF3O43395 683 aaKnown RBP20.83■□□□□ 0.93
TRAPPC4-203ENST00000447216 AKAP17AQ02040 695 aaKnown RBP20.83■□□□□ 0.93
TRAPPC4-203ENST00000447216 CPXCR1Q8N123 301 aa20.83■□□□□ 0.93
TRAPPC4-203ENST00000447216 REPS2Q8NFH8 660 aa20.83■□□□□ 0.93
TRAPPC4-203ENST00000447216 SMCR8Q8TEV9 937 aaPredicted RBP20.83■□□□□ 0.93
TRAPPC4-203ENST00000447216 LLPHQ9BRT6 129 aaKnown RBP20.83■□□□□ 0.93
TRAPPC4-203ENST00000447216 RNF26Q9BY78 433 aaPredicted RBP20.83■□□□□ 0.93
TRAPPC4-203ENST00000447216 RAVER2Q9HCJ3 691 aaKnown RBP20.83■□□□□ 0.93
TRAPPC4-203ENST00000447216 BTBD7Q9P203 1132 aa20.83■□□□□ 0.93
TRAPPC4-203ENST00000447216 ORC3Q9UBD5 711 aaPredicted RBP20.83■□□□□ 0.93
TRAPPC4-203ENST00000447216 PPP1R11O60927 126 aaPredicted RBP20.82■□□□□ 0.92
TRAPPC4-203ENST00000447216 CNMDO75829 334 aa20.82■□□□□ 0.92
TRAPPC4-203ENST00000447216 FDPSP14324 419 aaKnown RBP20.82■□□□□ 0.92
TRAPPC4-203ENST00000447216 TMEM132BQ14DG7 1078 aa20.82■□□□□ 0.92
TRAPPC4-203ENST00000447216 LBX2Q6XYB7 198 aa20.82■□□□□ 0.92
TRAPPC4-203ENST00000447216 REM2Q8IYK8 340 aaPredicted RBP20.82■□□□□ 0.92
TRAPPC4-203ENST00000447216 TRIM22Q8IYM9 498 aa20.82■□□□□ 0.92
TRAPPC4-203ENST00000447216 SMARCC2Q8TAQ2 1214 aa20.82■□□□□ 0.92
TRAPPC4-203ENST00000447216 TXNRD2Q9NNW7 524 aa20.82■□□□□ 0.92
TRAPPC4-203ENST00000447216 SEC63Q9UGP8 760 aaKnown RBP20.82■□□□□ 0.92
TRAPPC4-203ENST00000447216 ZNF536O15090 1300 aa20.81■□□□□ 0.92
TRAPPC4-203ENST00000447216 PNMA6FA0A0J9YX94 578 aa20.81■□□□□ 0.92
TRAPPC4-203ENST00000447216 ZBTB5O15062 677 aa20.81■□□□□ 0.92
TRAPPC4-203ENST00000447216 CRHR2Q13324 411 aa20.81■□□□□ 0.92
TRAPPC4-203ENST00000447216 PLS1Q14651 629 aa20.81■□□□□ 0.92
TRAPPC4-203ENST00000447216 PKN1Q16512 942 aa20.81■□□□□ 0.92
TRAPPC4-203ENST00000447216 GPKOWQ92917 476 aaPredicted RBP eCLIP20.81■□□□□ 0.92
TRAPPC4-203ENST00000447216 AGBL1Q96MI9 1066 aa20.81■□□□□ 0.92
TRAPPC4-203ENST00000447216 AIFM3Q96NN9 605 aa20.81■□□□□ 0.92
TRAPPC4-203ENST00000447216 RBPJLQ9UBG7 517 aa20.81■□□□□ 0.92
TRAPPC4-203ENST00000447216 SMC3Q9UQE7 1217 aa20.81■□□□□ 0.92
TRAPPC4-203ENST00000447216 ADGRA2Q96PE1 1338 aa20.8■□□□□ 0.92
TRAPPC4-203ENST00000447216 STK36Q9NRP7 1315 aa20.8■□□□□ 0.92
TRAPPC4-203ENST00000447216 ZNFX1Q9P2E3 1918 aaKnown RBP20.8■□□□□ 0.92
TRAPPC4-203ENST00000447216 HSP90AA1P07900 732 aaKnown RBP20.8■□□□□ 0.92
TRAPPC4-203ENST00000447216 FDX1P10109 184 aa20.8■□□□□ 0.92
TRAPPC4-203ENST00000447216 FOSBP53539 338 aa20.8■□□□□ 0.92
TRAPPC4-203ENST00000447216 USH1GQ495M9 461 aa20.8■□□□□ 0.92
TRAPPC4-203ENST00000447216 DNAJC5GQ8N7S2 189 aa20.8■□□□□ 0.92
TRAPPC4-203ENST00000447216 COA7Q96BR5 231 aa20.8■□□□□ 0.92
TRAPPC4-203ENST00000447216 R3HDMLQ9H3Y0 253 aa20.8■□□□□ 0.92
TRAPPC4-203ENST00000447216 ZFYVE28Q9HCC9 887 aa20.8■□□□□ 0.92
TRAPPC4-203ENST00000447216 CPA4Q9UI42 421 aa20.8■□□□□ 0.92
TRAPPC4-203ENST00000447216 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.8■□□□□ 0.92
TRAPPC4-203ENST00000447216 DOCK3Q8IZD9 2030 aa20.8■□□□□ 0.92
TRAPPC4-203ENST00000447216 CA12O43570 354 aa20.79■□□□□ 0.92
TRAPPC4-203ENST00000447216 DEXIO95424 95 aa20.79■□□□□ 0.92
TRAPPC4-203ENST00000447216 SCG2P13521 617 aa20.79■□□□□ 0.92
TRAPPC4-203ENST00000447216 GJB2P29033 226 aa20.79■□□□□ 0.92
TRAPPC4-203ENST00000447216 PFKFB3Q16875 520 aaPredicted RBP20.79■□□□□ 0.92
TRAPPC4-203ENST00000447216 HEATR3Q7Z4Q2 680 aa20.79■□□□□ 0.92
TRAPPC4-203ENST00000447216 FBXO11Q86XK2 927 aa20.79■□□□□ 0.92
TRAPPC4-203ENST00000447216 ANKRD13CQ8N6S4 541 aa20.79■□□□□ 0.92
TRAPPC4-203ENST00000447216 MB21D1Q8N884 522 aa20.79■□□□□ 0.92
TRAPPC4-203ENST00000447216 ZNF214Q9UL59 606 aaPredicted RBP20.79■□□□□ 0.92
TRAPPC4-203ENST00000447216 CCPG1Q9ULG6 757 aa20.79■□□□□ 0.92
TRAPPC4-203ENST00000447216 RABGAP1Q9Y3P9 1069 aa20.79■□□□□ 0.92
TRAPPC4-203ENST00000447216 RBBP6Q7Z6E9 1792 aaKnown RBP20.79■□□□□ 0.92
TRAPPC4-203ENST00000447216 MGAMO43451 1857 aa20.78■□□□□ 0.92
TRAPPC4-203ENST00000447216 TRPA1O75762 1119 aa20.78■□□□□ 0.92
TRAPPC4-203ENST00000447216 ALDH1A1P00352 501 aa20.78■□□□□ 0.92
TRAPPC4-203ENST00000447216 ICAM1P05362 532 aa20.78■□□□□ 0.92
TRAPPC4-203ENST00000447216 GCLCP48506 637 aaPredicted RBP20.78■□□□□ 0.92
TRAPPC4-203ENST00000447216 HMGN5P82970 282 aaKnown RBP20.78■□□□□ 0.92
TRAPPC4-203ENST00000447216 Q3C1V9 767 aa20.78■□□□□ 0.92
TRAPPC4-203ENST00000447216 WWC2Q6AWC2 1192 aa20.78■□□□□ 0.92
TRAPPC4-203ENST00000447216 SNRNP48Q6IEG0 339 aaKnown RBP20.78■□□□□ 0.92
TRAPPC4-203ENST00000447216 GTF3C2Q8WUA4 911 aaPredicted RBP20.78■□□□□ 0.92
TRAPPC4-203ENST00000447216 INTS4Q96HW7 963 aaKnown RBP20.78■□□□□ 0.92
TRAPPC4-203ENST00000447216 RNF186Q9NXI6 227 aa20.78■□□□□ 0.92
TRAPPC4-203ENST00000447216 RBM27Q9P2N5 1060 aaKnown RBP20.78■□□□□ 0.92
TRAPPC4-203ENST00000447216 ZSWIM8A7E2V4 1837 aa20.77■□□□□ 0.92
TRAPPC4-203ENST00000447216 TBC1D8O95759 1140 aa20.77■□□□□ 0.92
TRAPPC4-203ENST00000447216 ALAS1P13196 640 aa20.77■□□□□ 0.92
TRAPPC4-203ENST00000447216 ERVK-9P63128 1117 aa20.77■□□□□ 0.92
TRAPPC4-203ENST00000447216 ERVK-24P63145 666 aa20.77■□□□□ 0.92
TRAPPC4-203ENST00000447216 FAM184AQ8NB25 1140 aa20.77■□□□□ 0.92
TRAPPC4-203ENST00000447216 SHISA4Q96DD7 197 aa20.77■□□□□ 0.92
TRAPPC4-203ENST00000447216 ALG1Q9BT22 464 aa20.77■□□□□ 0.92
TRAPPC4-203ENST00000447216 AMNQ9BXJ7 453 aa20.77■□□□□ 0.92
TRAPPC4-203ENST00000447216 SPATC1LQ9H0A9 340 aa20.77■□□□□ 0.92
TRAPPC4-203ENST00000447216 HOMER2Q9NSB8 354 aa20.77■□□□□ 0.92
TRAPPC4-203ENST00000447216 GJB4Q9NTQ9 266 aa20.77■□□□□ 0.92
TRAPPC4-203ENST00000447216 RIPK3Q9Y572 518 aa20.77■□□□□ 0.92
TRAPPC4-203ENST00000447216 PCDHA1Q9Y5I3 950 aa20.77■□□□□ 0.92
TRAPPC4-203ENST00000447216 PLXNB2O15031 1838 aa20.76■□□□□ 0.91
TRAPPC4-203ENST00000447216 STXBP3O00186 592 aa20.76■□□□□ 0.91
TRAPPC4-203ENST00000447216 TLR2O60603 784 aa20.76■□□□□ 0.91
TRAPPC4-203ENST00000447216 STAT3P40763 770 aa20.76■□□□□ 0.91
TRAPPC4-203ENST00000447216 TYW1BQ6NUM6 668 aa20.76■□□□□ 0.91
TRAPPC4-203ENST00000447216 MOV10L1Q9BXT6 1211 aaKnown RBP20.76■□□□□ 0.91
TRAPPC4-203ENST00000447216 TEX13BQ9BXU2 312 aa20.76■□□□□ 0.91
TRAPPC4-203ENST00000447216 VPS54Q9P1Q0 977 aa20.76■□□□□ 0.91
TRAPPC4-203ENST00000447216 MORF4L1Q9UBU8 362 aa20.76■□□□□ 0.91
TRAPPC4-203ENST00000447216 ATP2A1O14983 1001 aa20.75■□□□□ 0.91
TRAPPC4-203ENST00000447216 BCRP11274 1271 aa20.75■□□□□ 0.91
TRAPPC4-203ENST00000447216 OAZ1P54368 228 aa20.75■□□□□ 0.91
TRAPPC4-203ENST00000447216 C17orf99Q6UX52 265 aa20.75■□□□□ 0.91
TRAPPC4-203ENST00000447216 GPRC5AQ8NFJ5 357 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms