RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 IVNS1ABPQ9Y6Y0 642 aa8.72□□□□□ -1.01
HDAC9-216ENST00000446646 DCDC2CA8MYV0 355 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 USP17L15C9J2P7 530 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 USP17L13C9JLJ4 530 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 USP17L11C9JVI0 530 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 USP17L18D6R9N7 530 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 USP17L22D6RA61 530 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 USP17L17D6RBQ6 530 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 USP17L19D6RCP7 530 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 USP17L20D6RJB6 530 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 APBB1O00213 710 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 ADCY6O43306 1168 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 LPXNO60711 386 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 ALDH1L1O75891 902 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 GH2P01242 217 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 CA3P07451 260 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 ASNSP08243 561 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 ZNF865P0CJ78 1059 aaPredicted RBP8.71□□□□□ -1.02
HDAC9-216ENST00000446646 RARBP10826 455 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 ERCC3P19447 782 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 POU3F3P20264 500 aaPredicted RBP8.71□□□□□ -1.02
HDAC9-216ENST00000446646 CDK7P50613 346 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 CCNA1P78396 465 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 USP17L24Q0WX57 530 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 FUT2Q10981 343 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 ATP2B3Q16720 1220 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 CCDC102BQ68D86 513 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 PSRC1Q6PGN9 363 aaPredicted RBP8.71□□□□□ -1.02
HDAC9-216ENST00000446646 HFE2Q6ZVN8 426 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 SCUBE3Q8IX30 993 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 GJD3Q8N144 294 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 PRSS33Q8NF86 280 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 GTF3C2Q8WUA4 911 aaPredicted RBP8.71□□□□□ -1.02
HDAC9-216ENST00000446646 MAML3Q96JK9 1138 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 TMUB1Q9BVT8 246 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 SIL1Q9H173 461 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 GPCPD1Q9NPB8 672 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 IL23AQ9NPF7 189 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 STARD7Q9NQZ5 370 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 DENND2AQ9ULE3 1009 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 COG5Q9UP83 839 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.71□□□□□ -1.02
HDAC9-216ENST00000446646 FANCIQ9NVI1 1328 aa8.71□□□□□ -1.02
HDAC9-216ENST00000446646 ADH1BP00325 375 aa8.7□□□□□ -1.02
HDAC9-216ENST00000446646 PGK2P07205 417 aa8.7□□□□□ -1.02
HDAC9-216ENST00000446646 IL9P15248 144 aa8.7□□□□□ -1.02
HDAC9-216ENST00000446646 KCNA10Q16322 511 aa8.7□□□□□ -1.02
HDAC9-216ENST00000446646 KIAA1755Q5JYT7 1200 aa8.7□□□□□ -1.02
HDAC9-216ENST00000446646 LBX2Q6XYB7 198 aa8.7□□□□□ -1.02
HDAC9-216ENST00000446646 RNF180Q86T96 592 aa8.7□□□□□ -1.02
HDAC9-216ENST00000446646 METTL16Q86W50 562 aaKnown RBP8.7□□□□□ -1.02
HDAC9-216ENST00000446646 MAPKAPK5Q8IW41 473 aa8.7□□□□□ -1.02
HDAC9-216ENST00000446646 FAM178BQ8IXR5 827 aa8.7□□□□□ -1.02
HDAC9-216ENST00000446646 TEX11Q8IYF3 940 aa8.7□□□□□ -1.02
HDAC9-216ENST00000446646 FAM9BQ8IZU0 186 aa8.7□□□□□ -1.02
HDAC9-216ENST00000446646 KLHDC9Q8NEP7 349 aa8.7□□□□□ -1.02
HDAC9-216ENST00000446646 ARNTL2Q8WYA1 636 aa8.7□□□□□ -1.02
HDAC9-216ENST00000446646 NSUN4Q96CB9 384 aaKnown RBP8.7□□□□□ -1.02
HDAC9-216ENST00000446646 C12orf42Q96LP6 360 aa8.7□□□□□ -1.02
HDAC9-216ENST00000446646 SRCIN1Q9C0H9 1055 aa8.7□□□□□ -1.02
HDAC9-216ENST00000446646 RPAP3Q9H6T3 665 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-216ENST00000446646 SAP30BPQ9UHR5 308 aaKnown RBP8.7□□□□□ -1.02
HDAC9-216ENST00000446646 HERC5Q9UII4 1024 aaKnown RBP8.7□□□□□ -1.02
HDAC9-216ENST00000446646 PALD1Q9ULE6 856 aa8.7□□□□□ -1.02
HDAC9-216ENST00000446646 FRYLO94915 3013 aa8.7□□□□□ -1.02
HDAC9-216ENST00000446646 TECTAO75443 2155 aa8.7□□□□□ -1.02
HDAC9-216ENST00000446646 ZNF521Q96K83 1311 aa8.7□□□□□ -1.02
HDAC9-216ENST00000446646 SYNRGQ9UMZ2 1314 aa8.7□□□□□ -1.02
HDAC9-216ENST00000446646 KMT2BQ9UMN6 2715 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-216ENST00000446646 BAHCC1Q9P281 2608 aa8.69□□□□□ -1.02
HDAC9-216ENST00000446646 SPTBN2O15020 2390 aa8.69□□□□□ -1.02
HDAC9-216ENST00000446646 ACACBO00763 2458 aa8.69□□□□□ -1.02
HDAC9-216ENST00000446646 RNF223E7ERA6 249 aa8.69□□□□□ -1.02
HDAC9-216ENST00000446646 S1PR4O95977 384 aa8.69□□□□□ -1.02
HDAC9-216ENST00000446646 FGBP02675 491 aa8.69□□□□□ -1.02
HDAC9-216ENST00000446646 PTGS1P23219 599 aa8.69□□□□□ -1.02
HDAC9-216ENST00000446646 GCGRP47871 477 aa8.69□□□□□ -1.02
HDAC9-216ENST00000446646 CCL23P55773 120 aa8.69□□□□□ -1.02
HDAC9-216ENST00000446646 EXOSC9Q06265 439 aaKnown RBP8.69□□□□□ -1.02
HDAC9-216ENST00000446646 GRB10Q13322 594 aa8.69□□□□□ -1.02
HDAC9-216ENST00000446646 TTLL4Q14679 1199 aa8.69□□□□□ -1.02
HDAC9-216ENST00000446646 WWC1Q8IX03 1113 aa8.69□□□□□ -1.02
HDAC9-216ENST00000446646 FAM126BQ8IXS8 530 aa8.69□□□□□ -1.02
HDAC9-216ENST00000446646 TMEM199Q8N511 208 aa8.69□□□□□ -1.02
HDAC9-216ENST00000446646 SPATC1LQ9H0A9 340 aa8.69□□□□□ -1.02
HDAC9-216ENST00000446646 WNT8AQ9H1J5 351 aa8.69□□□□□ -1.02
HDAC9-216ENST00000446646 PI4KBQ9UBF8 816 aa8.69□□□□□ -1.02
HDAC9-216ENST00000446646 V9GY48 417 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-216ENST00000446646 SSTR3P32745 418 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-216ENST00000446646 GUCY1A2P33402 732 aa8.68□□□□□ -1.02
HDAC9-216ENST00000446646 TIMM10P62072 90 aa8.68□□□□□ -1.02
HDAC9-216ENST00000446646 TAP1Q03518 808 aa8.68□□□□□ -1.02
HDAC9-216ENST00000446646 CCDC27Q2M243 656 aa8.68□□□□□ -1.02
HDAC9-216ENST00000446646 ADGRA1Q86SQ6 560 aa8.68□□□□□ -1.02
HDAC9-216ENST00000446646 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-216ENST00000446646 FEZ1Q99689 392 aa8.68□□□□□ -1.02
HDAC9-216ENST00000446646 FAM86C1Q9NVL1 165 aa8.68□□□□□ -1.02
HDAC9-216ENST00000446646 GNL3LQ9NVN8 582 aaKnown RBP8.68□□□□□ -1.02
HDAC9-216ENST00000446646 PA2G4Q9UQ80 394 aaKnown RBP8.68□□□□□ -1.02
HDAC9-216ENST00000446646 PCDHA11Q9Y5I1 949 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms