RNA–Protein interactions for RNA: ENST00000445770.3

LINC01949-201, Transcript of long intergenic non-protein coding RNA 1949, humanhuman

TSL 1 (best) BASIC

Gene LINC01949, Length 2,721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01949-201ENST00000445770 PPP4CP60510 307 aa11.13□□□□□ -0.63
LINC01949-201ENST00000445770 DCAF8Q5TAQ9 597 aa11.13□□□□□ -0.63
LINC01949-201ENST00000445770 USP40Q9NVE5 1235 aa11.13□□□□□ -0.63
LINC01949-201ENST00000445770 THSD7AQ9UPZ6 1657 aa11.13□□□□□ -0.63
LINC01949-201ENST00000445770 PDS5AQ29RF7 1337 aaKnown RBP11.13□□□□□ -0.63
LINC01949-201ENST00000445770 A0A0U1RQG5 324 aaPredicted RBP11.13□□□□□ -0.63
LINC01949-201ENST00000445770 M0R2N6 131 aa11.13□□□□□ -0.63
LINC01949-201ENST00000445770 SLC37A4O43826 429 aa11.13□□□□□ -0.63
LINC01949-201ENST00000445770 UBA7P41226 1012 aa11.13□□□□□ -0.63
LINC01949-201ENST00000445770 KLK7P49862 253 aa11.13□□□□□ -0.63
LINC01949-201ENST00000445770 RAD51AP2Q09MP3 1159 aa11.13□□□□□ -0.63
LINC01949-201ENST00000445770 KRT31Q15323 416 aa11.13□□□□□ -0.63
LINC01949-201ENST00000445770 CCDC178Q5BJE1 867 aa11.13□□□□□ -0.63
LINC01949-201ENST00000445770 REXO1L1PQ8IX06 675 aa11.13□□□□□ -0.63
LINC01949-201ENST00000445770 NUP88Q99567 741 aaPredicted RBP11.13□□□□□ -0.63
LINC01949-201ENST00000445770 ZC3H12CQ9C0D7 883 aaKnown RBP11.13□□□□□ -0.63
LINC01949-201ENST00000445770 PDGFDQ9GZP0 370 aaPredicted RBP11.13□□□□□ -0.63
LINC01949-201ENST00000445770 DISC1Q9NRI5 854 aa11.13□□□□□ -0.63
LINC01949-201ENST00000445770 DDX60LQ5H9U9 1706 aaKnown RBP11.13□□□□□ -0.63
LINC01949-201ENST00000445770 LDHCP07864 332 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 PDHBP11177 359 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 TNNI2P48788 182 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 NR1I3Q14994 352 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 CCDC96Q2M329 555 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 RAD9BQ6WBX8 426 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 SLC30A10Q6XR72 485 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 GLIS3Q8NEA6 775 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 ACRBPQ8NEB7 543 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 ANKRD7Q92527 254 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 NUDT12Q9BQG2 462 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 POLD4Q9HCU8 107 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.12□□□□□ -0.63
LINC01949-201ENST00000445770 N4BP3O15049 544 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 PPP1R11O60927 126 aaPredicted RBP11.12□□□□□ -0.63
LINC01949-201ENST00000445770 APBA3O96018 575 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 GNG11P61952 73 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 KMT5BQ4FZB7 885 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 SPATA1Q5VX52 437 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 FBXO38Q6PIJ6 1188 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 TRIM65Q6PJ69 517 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 DYMQ7RTS9 669 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 ZSCAN29Q8IWY8 852 aaPredicted RBP11.12□□□□□ -0.63
LINC01949-201ENST00000445770 ST7Q9NRC1 585 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 PAXBP1Q9Y5B6 917 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 SPATA31A6Q5VVP1 1343 aa11.12□□□□□ -0.63
LINC01949-201ENST00000445770 GDF11O95390 407 aa11.11□□□□□ -0.63
LINC01949-201ENST00000445770 GYPCP04921 128 aa11.11□□□□□ -0.63
LINC01949-201ENST00000445770 CALML3P27482 149 aa11.11□□□□□ -0.63
LINC01949-201ENST00000445770 TBX2Q13207 712 aaPredicted RBP11.11□□□□□ -0.63
LINC01949-201ENST00000445770 KANK3Q6NY19 840 aa11.11□□□□□ -0.63
LINC01949-201ENST00000445770 CERKQ8TCT0 537 aa11.11□□□□□ -0.63
LINC01949-201ENST00000445770 ZFP91Q96JP5 570 aaPredicted RBP11.11□□□□□ -0.63
LINC01949-201ENST00000445770 ADD3Q9UEY8 706 aaKnown RBP11.11□□□□□ -0.63
LINC01949-201ENST00000445770 SEC63Q9UGP8 760 aaKnown RBP11.11□□□□□ -0.63
LINC01949-201ENST00000445770 A0A1B0GTH6 734 aa11.11□□□□□ -0.63
LINC01949-201ENST00000445770 CACNB1Q02641 598 aaPredicted RBP11.11□□□□□ -0.63
LINC01949-201ENST00000445770 CDC42EP5Q6NZY7 148 aa11.11□□□□□ -0.63
LINC01949-201ENST00000445770 NEDD1Q8NHV4 660 aa11.11□□□□□ -0.63
LINC01949-201ENST00000445770 RRP36Q96EU6 259 aaKnown RBP11.11□□□□□ -0.63
LINC01949-201ENST00000445770 CARD6Q9BX69 1037 aa11.11□□□□□ -0.63
LINC01949-201ENST00000445770 TRIM10Q9UDY6 481 aa11.11□□□□□ -0.63
LINC01949-201ENST00000445770 DACH1Q9UI36 760 aa11.11□□□□□ -0.63
LINC01949-201ENST00000445770 NAV1Q8NEY1 1877 aa11.11□□□□□ -0.63
LINC01949-201ENST00000445770 FAM170AA1A519 330 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 USP17L10C9JJH3 530 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 BBOX1O75936 387 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 SRGNP10124 158 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 PAK1Q13153 545 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 GSDMAQ96QA5 445 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 MTMR4Q9NYA4 1195 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 USP17L15C9J2P7 530 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 USP17L13C9JLJ4 530 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 USP17L11C9JVI0 530 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 USP17L18D6R9N7 530 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 USP17L22D6RA61 530 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 USP17L17D6RBQ6 530 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 USP17L19D6RCP7 530 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 USP17L20D6RJB6 530 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 ETF1P62495 437 aaKnown RBP11.1□□□□□ -0.63
LINC01949-201ENST00000445770 USP17L24Q0WX57 530 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 STK4Q13043 487 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 CDKAL1Q5VV42 579 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 USP17L6PQ6QN14 398 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 SPICE1Q8N0Z3 855 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 CCDC94Q9BW85 323 aaPredicted RBP11.1□□□□□ -0.63
LINC01949-201ENST00000445770 DNAJC18Q9H819 358 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 SLC39A2Q9NP94 309 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 ROBO3Q96MS0 1386 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 LY75O60449 1722 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 UBR3Q6ZT12 1888 aa11.1□□□□□ -0.63
LINC01949-201ENST00000445770 DLEC1Q9Y238 1755 aa11.09□□□□□ -0.63
LINC01949-201ENST00000445770 DDTLA6NHG4 134 aaPredicted RBP11.09□□□□□ -0.63
LINC01949-201ENST00000445770 KCNJ18B7U540 433 aa11.09□□□□□ -0.63
LINC01949-201ENST00000445770 EDIL3O43854 480 aa11.09□□□□□ -0.63
LINC01949-201ENST00000445770 TXLNAP40222 546 aa11.09□□□□□ -0.63
LINC01949-201ENST00000445770 ASIC1P78348 528 aa11.09□□□□□ -0.63
LINC01949-201ENST00000445770 KCNJ12Q14500 433 aa11.09□□□□□ -0.63
LINC01949-201ENST00000445770 LRRC41Q15345 812 aa11.09□□□□□ -0.63
LINC01949-201ENST00000445770 SOGA3Q5TF21 947 aa11.09□□□□□ -0.63
LINC01949-201ENST00000445770 CABP7Q86V35 215 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms