RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 STX8Q9UNK0 236 aa18.33■□□□□ 0.52
SEC13-213ENST00000445064 MYADML2A6NDP7 307 aa18.32■□□□□ 0.52
SEC13-213ENST00000445064 ADCY6O43306 1168 aa18.32■□□□□ 0.52
SEC13-213ENST00000445064 NMT2O60551 498 aa18.32■□□□□ 0.52
SEC13-213ENST00000445064 DUSP11O75319 330 aaKnown RBP18.32■□□□□ 0.52
SEC13-213ENST00000445064 FDX1P10109 184 aa18.32■□□□□ 0.52
SEC13-213ENST00000445064 SLC1A4P43007 532 aa18.32■□□□□ 0.52
SEC13-213ENST00000445064 STAT2P52630 851 aa18.32■□□□□ 0.52
SEC13-213ENST00000445064 VPS53Q5VIR6 699 aa18.32■□□□□ 0.52
SEC13-213ENST00000445064 CCSAPQ6IQ19 270 aaPredicted RBP18.32■□□□□ 0.52
SEC13-213ENST00000445064 KCTD1Q719H9 257 aa18.32■□□□□ 0.52
SEC13-213ENST00000445064 CHURC1Q8WUH1 139 aa18.32■□□□□ 0.52
SEC13-213ENST00000445064 NUP133Q8WUM0 1156 aa18.32■□□□□ 0.52
SEC13-213ENST00000445064 STAG1Q8WVM7 1258 aa18.32■□□□□ 0.52
SEC13-213ENST00000445064 GMCL1Q96IK5 515 aa18.32■□□□□ 0.52
SEC13-213ENST00000445064 ABHD16BQ9H3Z7 469 aa18.32■□□□□ 0.52
SEC13-213ENST00000445064 STARD7Q9NQZ5 370 aa18.32■□□□□ 0.52
SEC13-213ENST00000445064 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.32■□□□□ 0.52
SEC13-213ENST00000445064 ZNF536O15090 1300 aa18.31■□□□□ 0.52
SEC13-213ENST00000445064 RAG1P15918 1043 aa18.31■□□□□ 0.52
SEC13-213ENST00000445064 SNAP25P60880 206 aa18.31■□□□□ 0.52
SEC13-213ENST00000445064 FAAP100Q0VG06 881 aa18.31■□□□□ 0.52
SEC13-213ENST00000445064 CCDC144BQ3MJ40 725 aa18.31■□□□□ 0.52
SEC13-213ENST00000445064 RCSD1Q6JBY9 416 aa18.31■□□□□ 0.52
SEC13-213ENST00000445064 ARMCX2Q7L311 632 aa18.31■□□□□ 0.52
SEC13-213ENST00000445064 FAM160B2Q86V87 743 aa18.31■□□□□ 0.52
SEC13-213ENST00000445064 CCDC144CPQ8IYA2 1237 aa18.31■□□□□ 0.52
SEC13-213ENST00000445064 EVI5LQ96CN4 794 aa18.31■□□□□ 0.52
SEC13-213ENST00000445064 GUCD1Q96NT3 240 aa18.31■□□□□ 0.52
SEC13-213ENST00000445064 TMEM39AQ9NV64 488 aa18.31■□□□□ 0.52
SEC13-213ENST00000445064 MTMR7Q9Y216 660 aa18.31■□□□□ 0.52
SEC13-213ENST00000445064 KIAA0355O15063 1070 aa18.3■□□□□ 0.52
SEC13-213ENST00000445064 C6orf222P0C671 652 aaPredicted RBP18.3■□□□□ 0.52
SEC13-213ENST00000445064 EPHB4P54760 987 aa18.3■□□□□ 0.52
SEC13-213ENST00000445064 ZNF697Q5TEC3 545 aa18.3■□□□□ 0.52
SEC13-213ENST00000445064 ACAD9Q9H845 621 aa18.3■□□□□ 0.52
SEC13-213ENST00000445064 RNF146Q9NTX7 359 aa18.3■□□□□ 0.52
SEC13-213ENST00000445064 COL6A3P12111 3177 aa18.3■□□□□ 0.52
SEC13-213ENST00000445064 MOXD2PA6NHM9 499 aa18.29■□□□□ 0.52
SEC13-213ENST00000445064 DCDC2CA8MYV0 355 aa18.29■□□□□ 0.52
SEC13-213ENST00000445064 RANBP6O60518 1105 aaKnown RBP18.29■□□□□ 0.52
SEC13-213ENST00000445064 ALAS1P13196 640 aa18.29■□□□□ 0.52
SEC13-213ENST00000445064 PDE1AP54750 535 aa18.29■□□□□ 0.52
SEC13-213ENST00000445064 PPP4R3BQ5MIZ7 849 aa18.29■□□□□ 0.52
SEC13-213ENST00000445064 CCDC174Q6PII3 467 aa18.29■□□□□ 0.52
SEC13-213ENST00000445064 RASGRP2Q7LDG7 609 aa18.29■□□□□ 0.52
SEC13-213ENST00000445064 ANKRD33Q7Z3H0 272 aa18.29■□□□□ 0.52
SEC13-213ENST00000445064 FAM133AQ8N9E0 248 aa18.29■□□□□ 0.52
SEC13-213ENST00000445064 VTI1AQ96AJ9 217 aa18.29■□□□□ 0.52
SEC13-213ENST00000445064 TOX2Q96NM4 488 aa18.29■□□□□ 0.52
SEC13-213ENST00000445064 TRERF1Q96PN7 1200 aa18.29■□□□□ 0.52
SEC13-213ENST00000445064 A1CFQ9NQ94 594 aaKnown RBP18.29■□□□□ 0.52
SEC13-213ENST00000445064 HELLSQ9NRZ9 838 aa18.29■□□□□ 0.52
SEC13-213ENST00000445064 ANAPC4Q9UJX5 808 aa18.29■□□□□ 0.52
SEC13-213ENST00000445064 SOWAHBA6NEL2 793 aa18.28■□□□□ 0.52
SEC13-213ENST00000445064 PLA2G6O60733 806 aa18.28■□□□□ 0.52
SEC13-213ENST00000445064 ASGR1P07306 291 aa18.28■□□□□ 0.52
SEC13-213ENST00000445064 GJA9P57773 515 aa18.28■□□□□ 0.52
SEC13-213ENST00000445064 GNASQ5JWF2 1037 aa18.28■□□□□ 0.52
SEC13-213ENST00000445064 PCSK9Q8NBP7 692 aaKnown RBP18.28■□□□□ 0.52
SEC13-213ENST00000445064 FAM227BQ96M60 508 aa18.28■□□□□ 0.52
SEC13-213ENST00000445064 GLT1D1Q96MS3 346 aa18.28■□□□□ 0.52
SEC13-213ENST00000445064 KATNBL1Q9H079 304 aa18.28■□□□□ 0.52
SEC13-213ENST00000445064 SPC25Q9HBM1 224 aa18.28■□□□□ 0.52
SEC13-213ENST00000445064 PRR12Q9ULL5 1215 aa18.28■□□□□ 0.52
SEC13-213ENST00000445064 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.27■□□□□ 0.52
SEC13-213ENST00000445064 FGAP02671 866 aa18.27■□□□□ 0.52
SEC13-213ENST00000445064 CST5P28325 142 aaPredicted RBP18.27■□□□□ 0.52
SEC13-213ENST00000445064 CDK7P50613 346 aa18.27■□□□□ 0.52
SEC13-213ENST00000445064 ALX1Q15699 326 aa18.27■□□□□ 0.52
SEC13-213ENST00000445064 MUM1L1Q5H9M0 696 aa18.27■□□□□ 0.52
SEC13-213ENST00000445064 UPF3AQ9H1J1 476 aaKnown RBP18.27■□□□□ 0.52
SEC13-213ENST00000445064 SEMA6BQ9H3T3 888 aa18.27■□□□□ 0.52
SEC13-213ENST00000445064 TOMM22Q9NS69 142 aa18.27■□□□□ 0.52
SEC13-213ENST00000445064 DDX49Q9Y6V7 483 aaKnown RBP18.27■□□□□ 0.52
SEC13-213ENST00000445064 ELP1O95163 1332 aa18.26■□□□□ 0.51
SEC13-213ENST00000445064 MCM3APO60318 1980 aa18.26■□□□□ 0.51
SEC13-213ENST00000445064 SMAD3P84022 425 aaKnown RBP18.26■□□□□ 0.51
SEC13-213ENST00000445064 BEX3Q00994 111 aa18.26■□□□□ 0.51
SEC13-213ENST00000445064 TNFAIP2Q03169 654 aa18.26■□□□□ 0.51
SEC13-213ENST00000445064 FPGSQ05932 587 aa18.26■□□□□ 0.51
SEC13-213ENST00000445064 HDAC1Q13547 482 aaPredicted RBP18.26■□□□□ 0.51
SEC13-213ENST00000445064 TKFCQ3LXA3 575 aa18.26■□□□□ 0.51
SEC13-213ENST00000445064 MCMDC2Q4G0Z9 681 aa18.26■□□□□ 0.51
SEC13-213ENST00000445064 RRP12Q5JTH9 1297 aaKnown RBP18.26■□□□□ 0.51
SEC13-213ENST00000445064 TTBK2Q6IQ55 1244 aa18.26■□□□□ 0.51
SEC13-213ENST00000445064 NOL8Q76FK4 1167 aaKnown RBP18.26■□□□□ 0.51
SEC13-213ENST00000445064 RNPC3Q96LT9 517 aaKnown RBP18.26■□□□□ 0.51
SEC13-213ENST00000445064 CDX2Q99626 313 aaPredicted RBP18.26■□□□□ 0.51
SEC13-213ENST00000445064 A0A0D9SFI3 127 aa18.25■□□□□ 0.51
SEC13-213ENST00000445064 CTAGE5O15320 804 aa18.25■□□□□ 0.51
SEC13-213ENST00000445064 ORC4O43929 436 aa18.25■□□□□ 0.51
SEC13-213ENST00000445064 TIMP1P01033 207 aa18.25■□□□□ 0.51
SEC13-213ENST00000445064 FGRP09769 529 aa18.25■□□□□ 0.51
SEC13-213ENST00000445064 SLC16A2P36021 539 aa18.25■□□□□ 0.51
SEC13-213ENST00000445064 NOVP48745 357 aa18.25■□□□□ 0.51
SEC13-213ENST00000445064 CCDC96Q2M329 555 aa18.25■□□□□ 0.51
SEC13-213ENST00000445064 PURBQ96QR8 312 aaKnown RBP18.25■□□□□ 0.51
SEC13-213ENST00000445064 ASTN1O14525 1302 aa18.24■□□□□ 0.51
SEC13-213ENST00000445064 ASB14A6NK59 587 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms