RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 TMEM60Q9H2L4 133 aa15.51■□□□□ 0.07
RBM39-216ENST00000444878 PSME4Q14997 1843 aa15.51■□□□□ 0.07
RBM39-216ENST00000444878 TERF1P54274 439 aa15.5■□□□□ 0.07
RBM39-216ENST00000444878 LETM2Q2VYF4 491 aa15.5■□□□□ 0.07
RBM39-216ENST00000444878 ENOX1Q8TC92 643 aaKnown RBP15.5■□□□□ 0.07
RBM39-216ENST00000444878 DNAJC18Q9H819 358 aa15.5■□□□□ 0.07
RBM39-216ENST00000444878 FAM196BA6NMK8 535 aa15.5■□□□□ 0.07
RBM39-216ENST00000444878 RAD21O60216 631 aa15.5■□□□□ 0.07
RBM39-216ENST00000444878 CCNT1O60563 726 aaKnown RBP15.5■□□□□ 0.07
RBM39-216ENST00000444878 CDC25AP30304 524 aa15.5■□□□□ 0.07
RBM39-216ENST00000444878 FMR1Q06787 632 aaKnown RBP eCLIP15.5■□□□□ 0.076e-13■□□□□ 10.3
RBM39-216ENST00000444878 CCDC96Q2M329 555 aa15.5■□□□□ 0.07
RBM39-216ENST00000444878 CFAP100Q494V2 611 aa15.5■□□□□ 0.07
RBM39-216ENST00000444878 CERKLQ49MI3 558 aaPredicted RBP15.5■□□□□ 0.07
RBM39-216ENST00000444878 GPATCH4Q5T3I0 446 aaKnown RBP15.5■□□□□ 0.07
RBM39-216ENST00000444878 PDXDC2PQ6P474 469 aa15.5■□□□□ 0.07
RBM39-216ENST00000444878 NEK8Q86SG6 692 aa15.5■□□□□ 0.07
RBM39-216ENST00000444878 STAMQ92783 540 aa15.5■□□□□ 0.07
RBM39-216ENST00000444878 NFE2L3Q9Y4A8 694 aa15.5■□□□□ 0.07
RBM39-216ENST00000444878 ERCC5P28715 1186 aaPredicted RBP15.49■□□□□ 0.07
RBM39-216ENST00000444878 PRPHP41219 470 aa15.49■□□□□ 0.07
RBM39-216ENST00000444878 CT47A1Q5JQC4 288 aaPredicted RBP15.49■□□□□ 0.07
RBM39-216ENST00000444878 JAKMIP3Q5VZ66 844 aa15.49■□□□□ 0.07
RBM39-216ENST00000444878 KCTD17Q8N5Z5 321 aa15.49■□□□□ 0.07
RBM39-216ENST00000444878 RASSF8Q8NHQ8 419 aa15.49■□□□□ 0.07
RBM39-216ENST00000444878 COA7Q96BR5 231 aa15.49■□□□□ 0.07
RBM39-216ENST00000444878 PDGFDQ9GZP0 370 aaPredicted RBP15.49■□□□□ 0.07
RBM39-216ENST00000444878 BIN2Q9UBW5 565 aaPredicted RBP15.49■□□□□ 0.07
RBM39-216ENST00000444878 PNMA6FA0A0J9YX94 578 aa15.49■□□□□ 0.07
RBM39-216ENST00000444878 SKILP12757 684 aa15.49■□□□□ 0.07
RBM39-216ENST00000444878 UBA7P41226 1012 aa15.49■□□□□ 0.07
RBM39-216ENST00000444878 STAT6P42226 847 aa15.49■□□□□ 0.07
RBM39-216ENST00000444878 SF3B2Q13435 895 aaKnown RBP15.49■□□□□ 0.07
RBM39-216ENST00000444878 KARSQ15046 597 aaKnown RBP15.49■□□□□ 0.07
RBM39-216ENST00000444878 TRMT44Q8IYL2 757 aaKnown RBP15.49■□□□□ 0.07
RBM39-216ENST00000444878 ADGRF4Q8IZF3 695 aa15.49■□□□□ 0.07
RBM39-216ENST00000444878 TTLL6Q8N841 843 aa15.49■□□□□ 0.07
RBM39-216ENST00000444878 TBCKQ8TEA7 893 aa15.49■□□□□ 0.07
RBM39-216ENST00000444878 TDRD3Q9H7E2 651 aaKnown RBP15.49■□□□□ 0.07
RBM39-216ENST00000444878 JMJD4Q9H9V9 463 aa15.49■□□□□ 0.07
RBM39-216ENST00000444878 YDJCA8MPS7 323 aa15.48■□□□□ 0.07
RBM39-216ENST00000444878 GTPBP6O43824 516 aaPredicted RBP15.48■□□□□ 0.07
RBM39-216ENST00000444878 OR52Z1P0C646 297 aa15.48■□□□□ 0.07
RBM39-216ENST00000444878 ADCY7P51828 1080 aa15.48■□□□□ 0.07
RBM39-216ENST00000444878 DHX8Q14562 1220 aaKnown RBP15.48■□□□□ 0.07
RBM39-216ENST00000444878 GRIPAP1Q4V328 841 aa15.48■□□□□ 0.07
RBM39-216ENST00000444878 TTBK2Q6IQ55 1244 aa15.48■□□□□ 0.07
RBM39-216ENST00000444878 KCTD1Q719H9 257 aa15.48■□□□□ 0.07
RBM39-216ENST00000444878 SH3BP5LQ7L8J4 393 aa15.48■□□□□ 0.07
RBM39-216ENST00000444878 DPF2Q92785 391 aa15.48■□□□□ 0.07
RBM39-216ENST00000444878 BLZF1Q9H2G9 400 aa15.48■□□□□ 0.07
RBM39-216ENST00000444878 KANSL2Q9H9L4 492 aa15.48■□□□□ 0.07
RBM39-216ENST00000444878 DISC1Q9NRI5 854 aa15.48■□□□□ 0.07
RBM39-216ENST00000444878 TPM2P07951 284 aa15.47■□□□□ 0.07
RBM39-216ENST00000444878 CCDC93Q567U6 631 aa15.47■□□□□ 0.07
RBM39-216ENST00000444878 HSP90AA4PQ58FG1 418 aa15.47■□□□□ 0.07
RBM39-216ENST00000444878 KLHL10Q6JEL2 608 aa15.47■□□□□ 0.07
RBM39-216ENST00000444878 CCDC150Q8NCX0 1101 aa15.47■□□□□ 0.07
RBM39-216ENST00000444878 PP2D1A8MPX8 630 aa15.47■□□□□ 0.07
RBM39-216ENST00000444878 EEF2P13639 858 aaKnown RBP15.47■□□□□ 0.07
RBM39-216ENST00000444878 SLC16A2P36021 539 aa15.47■□□□□ 0.07
RBM39-216ENST00000444878 BAG6P46379 1132 aa15.47■□□□□ 0.07
RBM39-216ENST00000444878 RRAGBQ5VZM2 374 aa15.47■□□□□ 0.07
RBM39-216ENST00000444878 RTKN2Q8IZC4 609 aa15.47■□□□□ 0.07
RBM39-216ENST00000444878 MTRQ99707 1265 aa15.47■□□□□ 0.07
RBM39-216ENST00000444878 CCSER1Q9C0I3 900 aa15.47■□□□□ 0.07
RBM39-216ENST00000444878 TMEM260Q9NX78 707 aa15.47■□□□□ 0.07
RBM39-216ENST00000444878 MYH7BA7E2Y1 1941 aa15.46■□□□□ 0.07
RBM39-216ENST00000444878 ENTPD3O75355 529 aa15.46■□□□□ 0.07
RBM39-216ENST00000444878 ZNF18P17022 549 aa15.46■□□□□ 0.07
RBM39-216ENST00000444878 SFPQP23246 707 aaKnown RBP eCLIP15.46■□□□□ 0.07
RBM39-216ENST00000444878 CCZ1BP86790 482 aa15.46■□□□□ 0.07
RBM39-216ENST00000444878 CCZ1P86791 482 aaPredicted RBP15.46■□□□□ 0.07
RBM39-216ENST00000444878 ORC2Q13416 577 aaPredicted RBP15.46■□□□□ 0.07
RBM39-216ENST00000444878 CUL4BQ13620 913 aa15.46■□□□□ 0.07
RBM39-216ENST00000444878 PPP1R18Q6NYC8 613 aa15.46■□□□□ 0.07
RBM39-216ENST00000444878 TATDN1Q6P1N9 297 aa15.46■□□□□ 0.07
RBM39-216ENST00000444878 MKL1Q969V6 931 aa15.46■□□□□ 0.07
RBM39-216ENST00000444878 PRMT6Q96LA8 375 aaPredicted RBP15.46■□□□□ 0.07
RBM39-216ENST00000444878 NYAP2Q9P242 653 aa15.46■□□□□ 0.07
RBM39-216ENST00000444878 ZBTB5O15062 677 aa15.46■□□□□ 0.06
RBM39-216ENST00000444878 CD44P16070 742 aaKnown RBP15.46■□□□□ 0.06
RBM39-216ENST00000444878 TMEM179Q6ZVK1 233 aa15.46■□□□□ 0.06
RBM39-216ENST00000444878 SMYD4Q8IYR2 804 aaPredicted RBP15.46■□□□□ 0.06
RBM39-216ENST00000444878 AK8Q96MA6 479 aa15.46■□□□□ 0.06
RBM39-216ENST00000444878 MED15Q96RN5 788 aa15.46■□□□□ 0.06
RBM39-216ENST00000444878 RMND1Q9NWS8 449 aa15.46■□□□□ 0.06
RBM39-216ENST00000444878 SYNRGQ9UMZ2 1314 aa15.46■□□□□ 0.06
RBM39-216ENST00000444878 ARFGEF1Q9Y6D6 1849 aa15.46■□□□□ 0.06
RBM39-216ENST00000444878 ATRNL1Q5VV63 1379 aa15.45■□□□□ 0.06
RBM39-216ENST00000444878 USP17L10C9JJH3 530 aa15.45■□□□□ 0.06
RBM39-216ENST00000444878 NRDCO43847 1150 aa15.45■□□□□ 0.06
RBM39-216ENST00000444878 SLC1A4P43007 532 aa15.45■□□□□ 0.06
RBM39-216ENST00000444878 ICA1Q05084 483 aa15.45■□□□□ 0.06
RBM39-216ENST00000444878 SEPT2Q15019 361 aa15.45■□□□□ 0.06
RBM39-216ENST00000444878 SHROOM1Q2M3G4 852 aaPredicted RBP15.45■□□□□ 0.06
RBM39-216ENST00000444878 SPATA1Q5VX52 437 aa15.45■□□□□ 0.06
RBM39-216ENST00000444878 DEFB132Q7Z7B7 95 aa15.45■□□□□ 0.06
RBM39-216ENST00000444878 SAMSN1Q9NSI8 373 aaKnown RBP15.45■□□□□ 0.06
RBM39-216ENST00000444878 TMOD2Q9NZR1 351 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms