RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 PALM3A6NDB9 673 aaPredicted RBP16.38■□□□□ 0.21
SSBP3-208ENST00000444533 SLC15A5A6NIM6 579 aa16.38■□□□□ 0.21
SSBP3-208ENST00000444533 GOLGA8AA7E2F4 631 aa16.38■□□□□ 0.21
SSBP3-208ENST00000444533 GOLGA8BA8MQT2 603 aa16.38■□□□□ 0.21
SSBP3-208ENST00000444533 ICAM1P05362 532 aa16.38■□□□□ 0.21
SSBP3-208ENST00000444533 METAP2P50579 478 aaKnown RBP eCLIP16.38■□□□□ 0.211e-6■■■□□ 15.4
SSBP3-208ENST00000444533 RTN1Q16799 776 aa16.38■□□□□ 0.21
SSBP3-208ENST00000444533 FBXO46Q6PJ61 603 aaPredicted RBP16.38■□□□□ 0.21
SSBP3-208ENST00000444533 NBPF11Q86T75 865 aa16.38■□□□□ 0.21
SSBP3-208ENST00000444533 ADGRF4Q8IZF3 695 aa16.38■□□□□ 0.21
SSBP3-208ENST00000444533 CHST13Q8NET6 341 aa16.38■□□□□ 0.21
SSBP3-208ENST00000444533 PORCNQ9H237 461 aa16.38■□□□□ 0.21
SSBP3-208ENST00000444533 RANBP17Q9H2T7 1088 aaKnown RBP16.38■□□□□ 0.21
SSBP3-208ENST00000444533 ZNF214Q9UL59 606 aaPredicted RBP16.38■□□□□ 0.21
SSBP3-208ENST00000444533 PEX10O60683 326 aa16.37■□□□□ 0.21
SSBP3-208ENST00000444533 ALAS1P13196 640 aa16.37■□□□□ 0.21
SSBP3-208ENST00000444533 RGS2P41220 211 aa16.37■□□□□ 0.21
SSBP3-208ENST00000444533 APOBRQ0VD83 1088 aa16.37■□□□□ 0.21
SSBP3-208ENST00000444533 CDC37Q16543 378 aaPredicted RBP16.37■□□□□ 0.21
SSBP3-208ENST00000444533 DPP9Q86TI2 863 aa16.37■□□□□ 0.21
SSBP3-208ENST00000444533 CCDC144CPQ8IYA2 1237 aa16.37■□□□□ 0.21
SSBP3-208ENST00000444533 ABRAQ8N0Z2 381 aa16.37■□□□□ 0.21
SSBP3-208ENST00000444533 STAG2Q8N3U4 1231 aa16.37■□□□□ 0.21
SSBP3-208ENST00000444533 IL27Q8NEV9 243 aa16.37■□□□□ 0.21
SSBP3-208ENST00000444533 REPS2Q8NFH8 660 aa16.37■□□□□ 0.21
SSBP3-208ENST00000444533 RRP36Q96EU6 259 aaKnown RBP16.37■□□□□ 0.21
SSBP3-208ENST00000444533 DDX11Q96FC9 970 aa16.37■□□□□ 0.21
SSBP3-208ENST00000444533 MMP19Q99542 508 aa16.37■□□□□ 0.21
SSBP3-208ENST00000444533 ACAD9Q9H845 621 aa16.37■□□□□ 0.21
SSBP3-208ENST00000444533 HOMER2Q9NSB8 354 aa16.37■□□□□ 0.21
SSBP3-208ENST00000444533 PTPN22Q9Y2R2 807 aa16.37■□□□□ 0.21
SSBP3-208ENST00000444533 PTPREP23469 700 aa16.36■□□□□ 0.21
SSBP3-208ENST00000444533 SMARCA1P28370 1054 aa16.36■□□□□ 0.21
SSBP3-208ENST00000444533 FLT3LGP49771 235 aa16.36■□□□□ 0.21
SSBP3-208ENST00000444533 NEK4P51957 841 aa16.36■□□□□ 0.21
SSBP3-208ENST00000444533 SNAP25P60880 206 aa16.36■□□□□ 0.21
SSBP3-208ENST00000444533 PRKCZQ05513 592 aa16.36■□□□□ 0.21
SSBP3-208ENST00000444533 CPLX2Q6PUV4 134 aaKnown RBP16.36■□□□□ 0.21
SSBP3-208ENST00000444533 FBXO11Q86XK2 927 aa16.36■□□□□ 0.21
SSBP3-208ENST00000444533 TRMT44Q8IYL2 757 aaKnown RBP16.36■□□□□ 0.21
SSBP3-208ENST00000444533 ANKRD35Q8N283 1001 aa16.36■□□□□ 0.21
SSBP3-208ENST00000444533 TRERF1Q96PN7 1200 aa16.36■□□□□ 0.21
SSBP3-208ENST00000444533 BIN2Q9UBW5 565 aaPredicted RBP16.36■□□□□ 0.21
SSBP3-208ENST00000444533 A0A0G2JMZ2 1700 aa16.36■□□□□ 0.21
SSBP3-208ENST00000444533 ZBTB5O15062 677 aa16.35■□□□□ 0.21
SSBP3-208ENST00000444533 RXRAP19793 462 aa16.35■□□□□ 0.21
SSBP3-208ENST00000444533 RBM25P49756 843 aaKnown RBP16.35■□□□□ 0.21
SSBP3-208ENST00000444533 SLC9C1Q4G0N8 1177 aa16.35■□□□□ 0.21
SSBP3-208ENST00000444533 POTEEQ6S8J3 1075 aa16.35■□□□□ 0.21
SSBP3-208ENST00000444533 HOMER1Q86YM7 354 aa16.35■□□□□ 0.21
SSBP3-208ENST00000444533 TNS4Q8IZW8 715 aa16.35■□□□□ 0.21
SSBP3-208ENST00000444533 AGBL1Q96MI9 1066 aa16.35■□□□□ 0.21
SSBP3-208ENST00000444533 SPZ1Q9BXG8 430 aa16.35■□□□□ 0.21
SSBP3-208ENST00000444533 AMNQ9BXJ7 453 aa16.35■□□□□ 0.21
SSBP3-208ENST00000444533 AGXT2Q9BYV1 514 aa16.35■□□□□ 0.21
SSBP3-208ENST00000444533 BACH2Q9BYV9 841 aa16.35■□□□□ 0.21
SSBP3-208ENST00000444533 RNF146Q9NTX7 359 aa16.35■□□□□ 0.21
SSBP3-208ENST00000444533 PARP14Q460N5 1801 aa16.35■□□□□ 0.21
SSBP3-208ENST00000444533 RLFQ13129 1914 aa16.35■□□□□ 0.21
SSBP3-208ENST00000444533 CPLX1O14810 134 aa16.34■□□□□ 0.21
SSBP3-208ENST00000444533 AKAP17AQ02040 695 aaKnown RBP16.34■□□□□ 0.21
SSBP3-208ENST00000444533 MAP2K5Q13163 448 aa16.34■□□□□ 0.21
SSBP3-208ENST00000444533 IRF5Q13568 498 aa16.34■□□□□ 0.21
SSBP3-208ENST00000444533 COL9A3Q14050 684 aaPredicted RBP16.34■□□□□ 0.21
SSBP3-208ENST00000444533 USH1GQ495M9 461 aa16.34■□□□□ 0.21
SSBP3-208ENST00000444533 COL13A1Q5TAT6 717 aaPredicted RBP16.34■□□□□ 0.21
SSBP3-208ENST00000444533 RAB11FIP4Q86YS3 637 aa16.34■□□□□ 0.21
SSBP3-208ENST00000444533 SLAIN1Q8ND83 568 aa16.34■□□□□ 0.21
SSBP3-208ENST00000444533 IL17RAQ96F46 866 aa16.34■□□□□ 0.21
SSBP3-208ENST00000444533 ZNF274Q96GC6 653 aaPredicted RBP16.34■□□□□ 0.21
SSBP3-208ENST00000444533 APBA2Q99767 749 aa16.34■□□□□ 0.21
SSBP3-208ENST00000444533 MCOLN1Q9GZU1 580 aa16.34■□□□□ 0.21
SSBP3-208ENST00000444533 CPVLQ9H3G5 476 aa16.34■□□□□ 0.21
SSBP3-208ENST00000444533 RIOX1Q9H6W3 641 aa16.34■□□□□ 0.21
SSBP3-208ENST00000444533 JMJD4Q9H9V9 463 aa16.34■□□□□ 0.21
SSBP3-208ENST00000444533 BRPF3Q9ULD4 1205 aa16.34■□□□□ 0.21
SSBP3-208ENST00000444533 MRPL11Q9Y3B7 192 aaKnown RBP16.34■□□□□ 0.21
SSBP3-208ENST00000444533 PFASO15067 1338 aa16.34■□□□□ 0.21
SSBP3-208ENST00000444533 ABCB11O95342 1321 aa16.34■□□□□ 0.21
SSBP3-208ENST00000444533 MGAMO43451 1857 aa16.33■□□□□ 0.21
SSBP3-208ENST00000444533 PNMA6FA0A0J9YX94 578 aa16.33■□□□□ 0.2
SSBP3-208ENST00000444533 ADCY3O60266 1144 aa16.33■□□□□ 0.2
SSBP3-208ENST00000444533 ST18O60284 1047 aa16.33■□□□□ 0.2
SSBP3-208ENST00000444533 XRCC5P13010 732 aaKnown RBP16.33■□□□□ 0.2
SSBP3-208ENST00000444533 CYP2B6P20813 491 aa16.33■□□□□ 0.2
SSBP3-208ENST00000444533 ADORA2AP29274 412 aa16.33■□□□□ 0.2
SSBP3-208ENST00000444533 CTGFP29279 349 aa16.33■□□□□ 0.2
SSBP3-208ENST00000444533 UBXN2AP68543 259 aa16.33■□□□□ 0.2
SSBP3-208ENST00000444533 GRB14Q14449 540 aa16.33■□□□□ 0.2
SSBP3-208ENST00000444533 QRICH1Q2TAL8 776 aa16.33■□□□□ 0.2
SSBP3-208ENST00000444533 TMTC3Q6ZXV5 915 aa16.33■□□□□ 0.2
SSBP3-208ENST00000444533 MCF2L2Q86YR7 1114 aa16.33■□□□□ 0.2
SSBP3-208ENST00000444533 ALDH8A1Q9H2A2 487 aaPredicted RBP16.33■□□□□ 0.2
SSBP3-208ENST00000444533 RBM27Q9P2N5 1060 aaKnown RBP16.33■□□□□ 0.2
SSBP3-208ENST00000444533 GABRQQ9UN88 632 aa16.33■□□□□ 0.2
SSBP3-208ENST00000444533 PTCH2Q9Y6C5 1203 aa16.33■□□□□ 0.2
SSBP3-208ENST00000444533 COL11A1P12107 1806 aaPredicted RBP16.33■□□□□ 0.2
SSBP3-208ENST00000444533 ZNF536O15090 1300 aa16.32■□□□□ 0.2
SSBP3-208ENST00000444533 GRK4P32298 578 aa16.32■□□□□ 0.2
SSBP3-208ENST00000444533 TOB2Q14106 344 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms