RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 C7orf25Q9BPX7 421 aa4.55□□□□□ -1.68
UBR3-206ENST00000444475 EPN1Q9Y6I3 576 aaPredicted RBP4.55□□□□□ -1.68
UBR3-206ENST00000444475 SLC30A1Q9Y6M5 507 aa4.55□□□□□ -1.68
UBR3-206ENST00000444475 IL16Q14005 1332 aa4.55□□□□□ -1.68
UBR3-206ENST00000444475 B2RBV5 119 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 TISP43B9A030 160 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 B9A039 149 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 F6X3S4 739 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 VEGFAP15692 232 aaPredicted RBP4.54□□□□□ -1.68
UBR3-206ENST00000444475 PWP1Q13610 501 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 TRIM14Q14142 442 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 PPP2R5DQ14738 602 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 PKDCCQ504Y2 493 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 ENOSF1Q7L5Y1 443 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.54□□□□□ -1.68
UBR3-206ENST00000444475 FAM193BQ96PV7 902 aaPredicted RBP4.54□□□□□ -1.68
UBR3-206ENST00000444475 NUP88Q99567 741 aaPredicted RBP4.54□□□□□ -1.68
UBR3-206ENST00000444475 LRRC3Q9BY71 257 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 A0A1W2PRU2 124 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 TMEM229AB2RXF0 380 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 INO80B-WBP1J3KQ70 363 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 TPP1O14773 563 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 CTAGE5O15320 804 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 CTNND1O60716 968 aaKnown RBP4.54□□□□□ -1.68
UBR3-206ENST00000444475 DKC1O60832 514 aaKnown RBP eCLIP4.54□□□□□ -1.68
UBR3-206ENST00000444475 TIPRLO75663 272 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 PAPLNO95428 1278 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 PF4V1P10720 104 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 CCNFP41002 786 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 DMTNQ08495 405 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 ADCY1Q08828 1119 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 STRN3Q13033 797 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 WSCD2Q2TBF2 565 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 PKN3Q6P5Z2 889 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 BEND5Q7L4P6 421 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 THEMISQ8N1K5 641 aaPredicted RBP4.54□□□□□ -1.68
UBR3-206ENST00000444475 RDH13Q8NBN7 331 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 OR6P1Q8NGX9 317 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 BRSK1Q8TDC3 778 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 BHMTQ93088 406 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 NTPCRQ9BSD7 190 aaKnown RBP4.54□□□□□ -1.68
UBR3-206ENST00000444475 SPATA9Q9BWV2 254 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 KCTD10Q9H3F6 313 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 GGA3Q9NZ52 723 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 ANKIB1Q9P2G1 1089 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 DAGLAQ9Y4D2 1042 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 SPTLC2O15270 562 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 MAFKO60675 156 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 ADRB2P07550 413 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 ARAFP10398 606 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 CPEP16870 476 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 POLR2BP30876 1174 aaKnown RBP4.54□□□□□ -1.68
UBR3-206ENST00000444475 RPIAP49247 311 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 CYP4A11Q02928 519 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 TAF7Q15545 349 aaPredicted RBP4.54□□□□□ -1.68
UBR3-206ENST00000444475 TRIM42Q8IWZ5 723 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 ETFBKMTQ8IXQ9 262 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 PPM1KQ8N3J5 372 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 ATP6V1E2Q96A05 226 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 PLD4Q96BZ4 506 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 NT5C1BQ96P26 610 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 TAAR9Q96RI9 348 aa4.54□□□□□ -1.68
UBR3-206ENST00000444475 CPSF2Q9P2I0 782 aaKnown RBP4.54□□□□□ -1.68
UBR3-206ENST00000444475 TSR3Q9UJK0 312 aaKnown RBP4.54□□□□□ -1.68
UBR3-206ENST00000444475 KLHL33A6NCF5 533 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 POTEMA6NI47 508 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 TTLL13PA6NNM8 815 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 VGLL3A8MV65 326 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 RASA4BC9J798 803 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 DNAJC8O75937 253 aaPredicted RBP4.53□□□□□ -1.68
UBR3-206ENST00000444475 SLITRK5O94991 958 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 SCNN1DP51172 638 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 CLCN2P51788 898 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 ZNF252P-AS1Q0IIN9 211 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 GRM1Q13255 1194 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 PCBP1Q15365 356 aaKnown RBP eCLIP4.53□□□□□ -1.68
UBR3-206ENST00000444475 RABL6Q3YEC7 729 aaPredicted RBP4.53□□□□□ -1.68
UBR3-206ENST00000444475 SETMARQ53H47 684 aaPredicted RBP4.53□□□□□ -1.68
UBR3-206ENST00000444475 ISM2Q6H9L7 571 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 POTEGQ6S5H5 508 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 RETREG3Q86VR2 466 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 CMTR2Q8IYT2 770 aaKnown RBP4.53□□□□□ -1.68
UBR3-206ENST00000444475 ASIC4Q96FT7 647 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 SEC62Q99442 399 aaKnown RBP4.53□□□□□ -1.68
UBR3-206ENST00000444475 NUDT16L1Q9BRJ7 211 aaKnown RBP4.53□□□□□ -1.68
UBR3-206ENST00000444475 DESI2Q9BSY9 194 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 HELLSQ9NRZ9 838 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 SUPT16HQ9Y5B9 1047 aaKnown RBP4.53□□□□□ -1.68
UBR3-206ENST00000444475 C2orf81A6NN90 581 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 CCNG2Q16589 344 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 OXLD1Q5BKU9 147 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 FAM205BPQ63HN1 556 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 RALYLQ86SE5 291 aaKnown RBP4.53□□□□□ -1.68
UBR3-206ENST00000444475 SYAP1Q96A49 352 aaPredicted RBP4.53□□□□□ -1.68
UBR3-206ENST00000444475 CCDC74AQ96AQ1 378 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 FUBP3Q96I24 572 aaKnown RBP eCLIP4.53□□□□□ -1.682e-6■■■□□ 18.9
UBR3-206ENST00000444475 NCAPGQ9BPX3 1015 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 ADPGKQ9BRR6 497 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 C19orf53Q9UNZ5 99 aaPredicted RBP4.53□□□□□ -1.68
UBR3-206ENST00000444475 PCDHB3Q9Y5E6 796 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms