RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 FIBCD1Q8N539 461 aa7.53□□□□□ -1.2
VPS50-206ENST00000443443 RASGRP4Q8TDF6 673 aa7.53□□□□□ -1.2
VPS50-206ENST00000443443 PLCD4Q9BRC7 762 aa7.53□□□□□ -1.2
VPS50-206ENST00000443443 MCOLN1Q9GZU1 580 aa7.53□□□□□ -1.2
VPS50-206ENST00000443443 ACBD3Q9H3P7 528 aa7.53□□□□□ -1.2
VPS50-206ENST00000443443 NOL6Q9H6R4 1146 aaKnown RBP7.53□□□□□ -1.2
VPS50-206ENST00000443443 ZNF552Q9H707 407 aaPredicted RBP7.53□□□□□ -1.2
VPS50-206ENST00000443443 CRTAC1Q9NQ79 661 aa7.53□□□□□ -1.2
VPS50-206ENST00000443443 ERVK13-1Q9NX77 482 aa7.53□□□□□ -1.2
VPS50-206ENST00000443443 PCDHB10Q9UN67 800 aa7.53□□□□□ -1.2
VPS50-206ENST00000443443 SMG5Q9UPR3 1016 aaKnown RBP7.53□□□□□ -1.2
VPS50-206ENST00000443443 GPR55Q9Y2T6 319 aaPredicted RBP7.53□□□□□ -1.2
VPS50-206ENST00000443443 SLC12A7Q9Y666 1083 aa7.53□□□□□ -1.2
VPS50-206ENST00000443443 H0Y8X5 98 aa7.52□□□□□ -1.21
VPS50-206ENST00000443443 EFEMP2O95967 443 aa7.52□□□□□ -1.21
VPS50-206ENST00000443443 PNLIPP16233 465 aa7.52□□□□□ -1.21
VPS50-206ENST00000443443 GIPRP48546 466 aa7.52□□□□□ -1.21
VPS50-206ENST00000443443 PPP2R5DQ14738 602 aa7.52□□□□□ -1.21
VPS50-206ENST00000443443 KIR3DS1Q14943 382 aa7.52□□□□□ -1.21
VPS50-206ENST00000443443 KCNA10Q16322 511 aa7.52□□□□□ -1.21
VPS50-206ENST00000443443 SGPP1Q9BX95 441 aa7.52□□□□□ -1.21
VPS50-206ENST00000443443 SLC12A9Q9BXP2 914 aa7.52□□□□□ -1.21
VPS50-206ENST00000443443 CCSER2Q9H7U1 834 aa7.52□□□□□ -1.21
VPS50-206ENST00000443443 SF3B6Q9Y3B4 125 aaKnown RBP7.52□□□□□ -1.21
VPS50-206ENST00000443443 CCDC9Q9Y3X0 531 aaKnown RBP7.52□□□□□ -1.21
VPS50-206ENST00000443443 MYOCOSA0A1B0GUC4 107 aa7.51□□□□□ -1.21
VPS50-206ENST00000443443 PRKCAP17252 672 aa7.51□□□□□ -1.21
VPS50-206ENST00000443443 GLDCP23378 1020 aa7.51□□□□□ -1.21
VPS50-206ENST00000443443 ARL4AP40617 200 aa7.51□□□□□ -1.21
VPS50-206ENST00000443443 GJA8P48165 433 aa7.51□□□□□ -1.21
VPS50-206ENST00000443443 DLG4P78352 724 aa7.51□□□□□ -1.21
VPS50-206ENST00000443443 HSF5Q4G112 596 aaPredicted RBP7.51□□□□□ -1.21
VPS50-206ENST00000443443 HEATR6Q6AI08 1181 aaKnown RBP7.51□□□□□ -1.21
VPS50-206ENST00000443443 JAMLQ86YT9 394 aa7.51□□□□□ -1.21
VPS50-206ENST00000443443 ADCY4Q8NFM4 1077 aa7.51□□□□□ -1.21
VPS50-206ENST00000443443 OR6P1Q8NGX9 317 aa7.51□□□□□ -1.21
VPS50-206ENST00000443443 ZDHHC15Q96MV8 337 aa7.51□□□□□ -1.21
VPS50-206ENST00000443443 TGIF2Q9GZN2 237 aa7.51□□□□□ -1.21
VPS50-206ENST00000443443 FHOD1Q9Y613 1164 aa7.51□□□□□ -1.21
VPS50-206ENST00000443443 A0A1W2PQ45 241 aaPredicted RBP7.5□□□□□ -1.21
VPS50-206ENST00000443443 A0A1W2PQH9 124 aa7.5□□□□□ -1.21
VPS50-206ENST00000443443 A0A1W2PQY0 241 aa7.5□□□□□ -1.21
VPS50-206ENST00000443443 PEX10O60683 326 aa7.5□□□□□ -1.21
VPS50-206ENST00000443443 SRSF3P84103 164 aaKnown RBP7.5□□□□□ -1.21
VPS50-206ENST00000443443 CYP4F8P98187 520 aa7.5□□□□□ -1.21
VPS50-206ENST00000443443 SLC7A5Q01650 507 aa7.5□□□□□ -1.21
VPS50-206ENST00000443443 POU4F1Q01851 419 aa7.5□□□□□ -1.21
VPS50-206ENST00000443443 RTP2Q5QGT7 225 aa7.5□□□□□ -1.21
VPS50-206ENST00000443443 HLA-DQA1Q5Y7H0 255 aa7.5□□□□□ -1.21
VPS50-206ENST00000443443 NUP43Q8NFH3 380 aa7.5□□□□□ -1.21
VPS50-206ENST00000443443 PHAXQ9H814 394 aaKnown RBP7.5□□□□□ -1.21
VPS50-206ENST00000443443 SIRT5Q9NXA8 310 aa7.5□□□□□ -1.21
VPS50-206ENST00000443443 TTBK1Q5TCY1 1321 aaPredicted RBP7.5□□□□□ -1.21
VPS50-206ENST00000443443 MPOP05164 745 aa7.49□□□□□ -1.21
VPS50-206ENST00000443443 CD3EP07766 207 aa7.49□□□□□ -1.21
VPS50-206ENST00000443443 MED14OSP0DP75 135 aa7.49□□□□□ -1.21
VPS50-206ENST00000443443 CIAPIN1Q6FI81 312 aa7.49□□□□□ -1.21
VPS50-206ENST00000443443 SLCO6A1Q86UG4 719 aa7.49□□□□□ -1.21
VPS50-206ENST00000443443 TMEM52Q8NDY8 209 aa7.49□□□□□ -1.21
VPS50-206ENST00000443443 SEC16BQ96JE7 1060 aa7.49□□□□□ -1.21
VPS50-206ENST00000443443 FGD4Q96M96 766 aa7.49□□□□□ -1.21
VPS50-206ENST00000443443 FCRL3Q96P31 734 aaPredicted RBP7.49□□□□□ -1.21
VPS50-206ENST00000443443 HAUS7Q99871 368 aa7.49□□□□□ -1.21
VPS50-206ENST00000443443 GBP3Q9H0R5 595 aa7.49□□□□□ -1.21
VPS50-206ENST00000443443 DIS3Q9Y2L1 958 aaKnown RBP7.49□□□□□ -1.21
VPS50-206ENST00000443443 TEX51A0A1B0GUA7 166 aa7.48□□□□□ -1.21
VPS50-206ENST00000443443 A0A1W2PQJ5 194 aa7.48□□□□□ -1.21
VPS50-206ENST00000443443 NUAK1O60285 661 aa7.48□□□□□ -1.21
VPS50-206ENST00000443443 SEMA7AO75326 666 aa7.48□□□□□ -1.21
VPS50-206ENST00000443443 LAPTM5Q13571 262 aa7.48□□□□□ -1.21
VPS50-206ENST00000443443 CILP2Q8IUL8 1156 aa7.48□□□□□ -1.21
VPS50-206ENST00000443443 ANAPC16Q96DE5 110 aa7.48□□□□□ -1.21
VPS50-206ENST00000443443 SHDQ96IW2 340 aa7.48□□□□□ -1.21
VPS50-206ENST00000443443 JMJD8Q96S16 334 aa7.48□□□□□ -1.21
VPS50-206ENST00000443443 KRTAP4-9Q9BYQ8 210 aa7.48□□□□□ -1.21
VPS50-206ENST00000443443 CD320Q9NPF0 282 aa7.48□□□□□ -1.21
VPS50-206ENST00000443443 IMPACTQ9P2X3 320 aa7.48□□□□□ -1.21
VPS50-206ENST00000443443 SUGT1Q9Y2Z0 365 aa7.48□□□□□ -1.21
VPS50-206ENST00000443443 A0A087WZG4 1122 aa7.47□□□□□ -1.21
VPS50-206ENST00000443443 CBFA2T2O43439 604 aa7.47□□□□□ -1.21
VPS50-206ENST00000443443 PPM1BO75688 479 aa7.47□□□□□ -1.21
VPS50-206ENST00000443443 EPHX1P07099 455 aa7.47□□□□□ -1.21
VPS50-206ENST00000443443 ZSCAN22P10073 491 aaPredicted RBP7.47□□□□□ -1.21
VPS50-206ENST00000443443 RAB3GAP1Q15042 981 aa7.47□□□□□ -1.21
VPS50-206ENST00000443443 SPOCD1Q6ZMY3 1216 aa7.47□□□□□ -1.21
VPS50-206ENST00000443443 C19orf47Q8N9M1 422 aaKnown RBP7.47□□□□□ -1.21
VPS50-206ENST00000443443 IRF2BPLQ9H1B7 796 aa7.47□□□□□ -1.21
VPS50-206ENST00000443443 WHRNQ9P202 907 aa7.47□□□□□ -1.21
VPS50-206ENST00000443443 CNOT6Q9ULM6 557 aaKnown RBP7.47□□□□□ -1.21
VPS50-206ENST00000443443 NUDT19A8MXV4 375 aa7.46□□□□□ -1.22
VPS50-206ENST00000443443 VAMP4O75379 141 aa7.46□□□□□ -1.22
VPS50-206ENST00000443443 TBC1D8O95759 1140 aa7.46□□□□□ -1.22
VPS50-206ENST00000443443 IFNGR1P15260 489 aa7.46□□□□□ -1.22
VPS50-206ENST00000443443 ERCC5P28715 1186 aaPredicted RBP7.46□□□□□ -1.22
VPS50-206ENST00000443443 LINC00310P59036 64 aa7.46□□□□□ -1.22
VPS50-206ENST00000443443 DPY19L1Q2PZI1 675 aa7.46□□□□□ -1.22
VPS50-206ENST00000443443 KRTAP19-4Q3LI73 84 aa7.46□□□□□ -1.22
VPS50-206ENST00000443443 OLFML2BQ68BL8 750 aa7.46□□□□□ -1.22
VPS50-206ENST00000443443 KIAA1211LQ6NV74 962 aa7.46□□□□□ -1.22
VPS50-206ENST00000443443 VPS37DQ86XT2 251 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms