RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 CSF2RAP15509 400 aa24.42■■□□□ 1.5
TMEM50B-204ENST00000442441 CCDC129Q6ZRS4 1044 aa24.42■■□□□ 1.5
TMEM50B-204ENST00000442441 ARMCX2Q7L311 632 aa24.42■■□□□ 1.5
TMEM50B-204ENST00000442441 CHST13Q8NET6 341 aa24.42■■□□□ 1.5
TMEM50B-204ENST00000442441 PBX4Q9BYU1 374 aa24.42■■□□□ 1.5
TMEM50B-204ENST00000442441 LRRCC1Q9C099 1032 aa24.42■■□□□ 1.5
TMEM50B-204ENST00000442441 FEM1BQ9UK73 627 aa24.42■■□□□ 1.5
TMEM50B-204ENST00000442441 CHD9Q3L8U1 2897 aa24.42■■□□□ 1.5
TMEM50B-204ENST00000442441 GRXCR1A8MXD5 290 aa24.41■■□□□ 1.5
TMEM50B-204ENST00000442441 PBX2P40425 430 aa24.41■■□□□ 1.5
TMEM50B-204ENST00000442441 FAM126BQ8IXS8 530 aa24.41■■□□□ 1.5
TMEM50B-204ENST00000442441 MKL1Q969V6 931 aa24.41■■□□□ 1.5
TMEM50B-204ENST00000442441 GAS2L1Q99501 681 aaPredicted RBP24.41■■□□□ 1.5
TMEM50B-204ENST00000442441 CHMP4BQ9H444 224 aaKnown RBP24.41■■□□□ 1.5
TMEM50B-204ENST00000442441 MYH4Q9Y623 1939 aa24.4■■□□□ 1.5
TMEM50B-204ENST00000442441 TLR3O15455 904 aaKnown RBP24.4■■□□□ 1.5
TMEM50B-204ENST00000442441 OAZ1P54368 228 aa24.4■■□□□ 1.5
TMEM50B-204ENST00000442441 PSRC1Q6PGN9 363 aaPredicted RBP24.4■■□□□ 1.5
TMEM50B-204ENST00000442441 ZNF365Q70YC5 407 aa24.4■■□□□ 1.5
TMEM50B-204ENST00000442441 CCDC144CPQ8IYA2 1237 aa24.4■■□□□ 1.5
TMEM50B-204ENST00000442441 PPP1R12CQ9BZL4 782 aa24.4■■□□□ 1.5
TMEM50B-204ENST00000442441 SYNPO2Q9UMS6 1093 aa24.4■■□□□ 1.5
TMEM50B-204ENST00000442441 MYO9BQ13459 2157 aa24.39■■□□□ 1.5
TMEM50B-204ENST00000442441 ACRP10323 421 aa24.39■■□□□ 1.49
TMEM50B-204ENST00000442441 ZNF444Q8N0Y2 327 aaPredicted RBP24.39■■□□□ 1.49
TMEM50B-204ENST00000442441 OSBP2Q969R2 916 aa24.39■■□□□ 1.49
TMEM50B-204ENST00000442441 CEP95Q96GE4 821 aa24.39■■□□□ 1.49
TMEM50B-204ENST00000442441 KATNBL1Q9H079 304 aa24.39■■□□□ 1.49
TMEM50B-204ENST00000442441 ZNF287Q9HBT7 754 aa24.39■■□□□ 1.49
TMEM50B-204ENST00000442441 ECHDC1Q9NTX5 307 aa24.39■■□□□ 1.49
TMEM50B-204ENST00000442441 MTMR4Q9NYA4 1195 aa24.39■■□□□ 1.49
TMEM50B-204ENST00000442441 CTAGE5O15320 804 aa24.38■■□□□ 1.49
TMEM50B-204ENST00000442441 SMARCA5O60264 1052 aaPredicted RBP24.38■■□□□ 1.49
TMEM50B-204ENST00000442441 PRDM1O75626 825 aa24.38■■□□□ 1.49
TMEM50B-204ENST00000442441 NKX3-2P78367 333 aa24.38■■□□□ 1.49
TMEM50B-204ENST00000442441 KBTBD3Q8NAB2 608 aa24.38■■□□□ 1.49
TMEM50B-204ENST00000442441 GMCL1P1Q8NEA9 526 aa24.38■■□□□ 1.49
TMEM50B-204ENST00000442441 APPBP2Q92624 585 aa24.38■■□□□ 1.49
TMEM50B-204ENST00000442441 PRDM12Q9H4Q4 367 aa24.38■■□□□ 1.49
TMEM50B-204ENST00000442441 TNFRSF10AO00220 468 aa24.37■■□□□ 1.49
TMEM50B-204ENST00000442441 TTLL1O95922 423 aa24.37■■□□□ 1.49
TMEM50B-204ENST00000442441 CD4P01730 458 aa24.37■■□□□ 1.49
TMEM50B-204ENST00000442441 CNTN2Q02246 1040 aa24.37■■□□□ 1.49
TMEM50B-204ENST00000442441 AKNAD1Q5T1N1 836 aa24.37■■□□□ 1.49
TMEM50B-204ENST00000442441 LRRC47Q8N1G4 583 aaKnown RBP24.37■■□□□ 1.49
TMEM50B-204ENST00000442441 PPM1EQ8WY54 764 aa24.37■■□□□ 1.49
TMEM50B-204ENST00000442441 EPB41L4AQ9HCS5 686 aaPredicted RBP24.37■■□□□ 1.49
TMEM50B-204ENST00000442441 HOMER2Q9NSB8 354 aa24.37■■□□□ 1.49
TMEM50B-204ENST00000442441 FDX1P10109 184 aa24.36■■□□□ 1.49
TMEM50B-204ENST00000442441 BMP3P12645 472 aa24.36■■□□□ 1.49
TMEM50B-204ENST00000442441 CYP2C18P33260 490 aa24.36■■□□□ 1.49
TMEM50B-204ENST00000442441 TDO2P48775 406 aa24.36■■□□□ 1.49
TMEM50B-204ENST00000442441 BEX3Q00994 111 aa24.36■■□□□ 1.49
TMEM50B-204ENST00000442441 FAM133AQ8N9E0 248 aa24.36■■□□□ 1.49
TMEM50B-204ENST00000442441 ACAD9Q9H845 621 aa24.36■■□□□ 1.49
TMEM50B-204ENST00000442441 IL23AQ9NPF7 189 aa24.36■■□□□ 1.49
TMEM50B-204ENST00000442441 RNF113AO15541 343 aaKnown RBP24.35■■□□□ 1.49
TMEM50B-204ENST00000442441 GPAA1O43292 621 aa24.35■■□□□ 1.49
TMEM50B-204ENST00000442441 GNAT2P19087 354 aa24.35■■□□□ 1.49
TMEM50B-204ENST00000442441 TNFAIP2Q03169 654 aa24.35■■□□□ 1.49
TMEM50B-204ENST00000442441 RAB30Q15771 203 aa24.35■■□□□ 1.49
TMEM50B-204ENST00000442441 SLFN13Q68D06 897 aa24.35■■□□□ 1.49
TMEM50B-204ENST00000442441 NOL8Q76FK4 1167 aaKnown RBP24.35■■□□□ 1.49
TMEM50B-204ENST00000442441 SLC43A3Q8NBI5 491 aa24.35■■□□□ 1.49
TMEM50B-204ENST00000442441 ATXN2LQ8WWM7 1075 aaKnown RBP24.35■■□□□ 1.49
TMEM50B-204ENST00000442441 HERVK_113Q902F9 699 aa24.35■■□□□ 1.49
TMEM50B-204ENST00000442441 MSRAQ9UJ68 235 aa24.35■■□□□ 1.49
TMEM50B-204ENST00000442441 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.34■■□□□ 1.49
TMEM50B-204ENST00000442441 CABYRO75952 493 aa24.34■■□□□ 1.49
TMEM50B-204ENST00000442441 APPP05067 770 aa24.34■■□□□ 1.49
TMEM50B-204ENST00000442441 ASTN1O14525 1302 aa24.34■■□□□ 1.49
TMEM50B-204ENST00000442441 TMEM232C9JQI7 657 aa24.33■■□□□ 1.49
TMEM50B-204ENST00000442441 ZFYP08048 801 aaPredicted RBP24.33■■□□□ 1.49
TMEM50B-204ENST00000442441 CXCL17Q6UXB2 119 aa24.33■■□□□ 1.49
TMEM50B-204ENST00000442441 NEDD1Q8NHV4 660 aa24.33■■□□□ 1.49
TMEM50B-204ENST00000442441 MTIF3Q9H2K0 278 aaKnown RBP24.33■■□□□ 1.49
TMEM50B-204ENST00000442441 A1CFQ9NQ94 594 aaKnown RBP24.33■■□□□ 1.49
TMEM50B-204ENST00000442441 CXXC1Q9P0U4 656 aaPredicted RBP24.33■■□□□ 1.49
TMEM50B-204ENST00000442441 GNEQ9Y223 722 aaKnown RBP24.33■■□□□ 1.49
TMEM50B-204ENST00000442441 PLIN4Q96Q06 1357 aa24.32■■□□□ 1.48
TMEM50B-204ENST00000442441 NCOR1O75376 2440 aa24.32■■□□□ 1.48
TMEM50B-204ENST00000442441 ASB14A6NK59 587 aa24.32■■□□□ 1.48
TMEM50B-204ENST00000442441 FGBP02675 491 aa24.32■■□□□ 1.48
TMEM50B-204ENST00000442441 TSPY3P0CV98 308 aa24.32■■□□□ 1.48
TMEM50B-204ENST00000442441 TSPY8P0CW00 308 aa24.32■■□□□ 1.48
TMEM50B-204ENST00000442441 STAT2P52630 851 aa24.32■■□□□ 1.48
TMEM50B-204ENST00000442441 ADGRE1Q14246 886 aa24.32■■□□□ 1.48
TMEM50B-204ENST00000442441 HIPK3Q9H422 1215 aa24.32■■□□□ 1.48
TMEM50B-204ENST00000442441 RNF146Q9NTX7 359 aa24.32■■□□□ 1.48
TMEM50B-204ENST00000442441 THEGQ9P2T0 379 aa24.32■■□□□ 1.48
TMEM50B-204ENST00000442441 ISY1Q9ULR0 285 aaKnown RBP24.32■■□□□ 1.48
TMEM50B-204ENST00000442441 CHD7Q9P2D1 2997 aa24.31■■□□□ 1.48
TMEM50B-204ENST00000442441 SOWAHBA6NEL2 793 aa24.31■■□□□ 1.48
TMEM50B-204ENST00000442441 PATL2C9JE40 543 aaKnown RBP24.31■■□□□ 1.48
TMEM50B-204ENST00000442441 M0R2C6 588 aa24.31■■□□□ 1.48
TMEM50B-204ENST00000442441 ITGA7Q13683 1181 aa24.31■■□□□ 1.48
TMEM50B-204ENST00000442441 FSCN1Q16658 493 aaKnown RBP24.31■■□□□ 1.48
TMEM50B-204ENST00000442441 TLK2Q86UE8 772 aa24.31■■□□□ 1.48
TMEM50B-204ENST00000442441 FAM160B2Q86V87 743 aa24.31■■□□□ 1.48
TMEM50B-204ENST00000442441 IFNL3Q8IZI9 196 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms