RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 TKFCQ3LXA3 575 aa17.04■□□□□ 0.32
PTPRN-206ENST00000442029 AKNAD1Q5T1N1 836 aa17.04■□□□□ 0.32
PTPRN-206ENST00000442029 CCDC174Q6PII3 467 aa17.04■□□□□ 0.32
PTPRN-206ENST00000442029 ZNF467Q7Z7K2 595 aaPredicted RBP17.04■□□□□ 0.32
PTPRN-206ENST00000442029 RNF146Q9NTX7 359 aa17.04■□□□□ 0.32
PTPRN-206ENST00000442029 ZHX1Q9UKY1 873 aaPredicted RBP17.04■□□□□ 0.32
PTPRN-206ENST00000442029 ATP11BQ9Y2G3 1177 aa17.04■□□□□ 0.32
PTPRN-206ENST00000442029 TACC3Q9Y6A5 838 aa17.04■□□□□ 0.32
PTPRN-206ENST00000442029 LTBP2Q14767 1821 aa17.04■□□□□ 0.32
PTPRN-206ENST00000442029 DNAJC25-GNG10A0A024R161 153 aa17.03■□□□□ 0.32
PTPRN-206ENST00000442029 ZNF213O14771 459 aa17.03■□□□□ 0.32
PTPRN-206ENST00000442029 ZNF865P0CJ78 1059 aaPredicted RBP17.03■□□□□ 0.32
PTPRN-206ENST00000442029 ALAS1P13196 640 aa17.03■□□□□ 0.32
PTPRN-206ENST00000442029 TAL1P17542 331 aaPredicted RBP17.03■□□□□ 0.32
PTPRN-206ENST00000442029 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.03■□□□□ 0.32
PTPRN-206ENST00000442029 AGBL1Q96MI9 1066 aa17.03■□□□□ 0.32
PTPRN-206ENST00000442029 LBHD1Q9BQE6 289 aaPredicted RBP17.03■□□□□ 0.32
PTPRN-206ENST00000442029 UBE2OQ9C0C9 1292 aaKnown RBP17.03■□□□□ 0.32
PTPRN-206ENST00000442029 TCP11L1Q9NUJ3 509 aa17.03■□□□□ 0.32
PTPRN-206ENST00000442029 FAM184BQ9ULE4 1060 aa17.03■□□□□ 0.32
PTPRN-206ENST00000442029 PRR12Q9ULL5 1215 aa17.03■□□□□ 0.32
PTPRN-206ENST00000442029 LCTP09848 1927 aa17.02■□□□□ 0.32
PTPRN-206ENST00000442029 POTEB2H3BUK9 544 aa17.02■□□□□ 0.32
PTPRN-206ENST00000442029 ADCYAP1R1P41586 468 aa17.02■□□□□ 0.32
PTPRN-206ENST00000442029 MAMDC4Q6UXC1 1216 aa17.02■□□□□ 0.32
PTPRN-206ENST00000442029 SLC39A5Q6ZMH5 540 aa17.02■□□□□ 0.32
PTPRN-206ENST00000442029 ESR2Q92731 530 aa17.02■□□□□ 0.32
PTPRN-206ENST00000442029 FERMT2Q96AC1 680 aa17.02■□□□□ 0.32
PTPRN-206ENST00000442029 TRERF1Q96PN7 1200 aa17.02■□□□□ 0.32
PTPRN-206ENST00000442029 TMEM47Q9BQJ4 181 aa17.02■□□□□ 0.32
PTPRN-206ENST00000442029 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.02■□□□□ 0.32
PTPRN-206ENST00000442029 SNAI1O95863 264 aaPredicted RBP17.01■□□□□ 0.31
PTPRN-206ENST00000442029 PGK1P00558 417 aa17.01■□□□□ 0.31
PTPRN-206ENST00000442029 NOVP48745 357 aa17.01■□□□□ 0.31
PTPRN-206ENST00000442029 MDM2Q00987 491 aaPredicted RBP17.01■□□□□ 0.31
PTPRN-206ENST00000442029 RASGRP2Q7LDG7 609 aa17.01■□□□□ 0.31
PTPRN-206ENST00000442029 TBC1D10CQ8IV04 446 aa17.01■□□□□ 0.31
PTPRN-206ENST00000442029 TTC14Q96N46 770 aa17.01■□□□□ 0.31
PTPRN-206ENST00000442029 CCPG1Q9ULG6 757 aa17.01■□□□□ 0.31
PTPRN-206ENST00000442029 ZNF536O15090 1300 aa17■□□□□ 0.31
PTPRN-206ENST00000442029 FRMPD2Q68DX3 1309 aaPredicted RBP17■□□□□ 0.31
PTPRN-206ENST00000442029 LRRC37A2A6NM11 1700 aa17■□□□□ 0.31
PTPRN-206ENST00000442029 NT5C2P49902 561 aa17■□□□□ 0.31
PTPRN-206ENST00000442029 SNAP25P60880 206 aa17■□□□□ 0.31
PTPRN-206ENST00000442029 IRX6P78412 446 aaPredicted RBP17■□□□□ 0.31
PTPRN-206ENST00000442029 ACVR2BQ13705 512 aa17■□□□□ 0.31
PTPRN-206ENST00000442029 ARMCX2Q7L311 632 aa17■□□□□ 0.31
PTPRN-206ENST00000442029 TDHQ8IZJ6 230 aa17■□□□□ 0.31
PTPRN-206ENST00000442029 ABHD16BQ9H3Z7 469 aa17■□□□□ 0.31
PTPRN-206ENST00000442029 SPC25Q9HBM1 224 aa17■□□□□ 0.31
PTPRN-206ENST00000442029 GPCPD1Q9NPB8 672 aa17■□□□□ 0.31
PTPRN-206ENST00000442029 A1CFQ9NQ94 594 aaKnown RBP17■□□□□ 0.31
PTPRN-206ENST00000442029 PRDM5Q9NQX1 630 aaPredicted RBP17■□□□□ 0.31
PTPRN-206ENST00000442029 DNAH12Q6ZR08 3092 aa16.99■□□□□ 0.31
PTPRN-206ENST00000442029 SLC16A2P36021 539 aa16.99■□□□□ 0.31
PTPRN-206ENST00000442029 IMMTQ16891 758 aaKnown RBP16.99■□□□□ 0.31
PTPRN-206ENST00000442029 TRIM60Q495X7 471 aa16.99■□□□□ 0.31
PTPRN-206ENST00000442029 CCDC178Q5BJE1 867 aa16.99■□□□□ 0.31
PTPRN-206ENST00000442029 SYDE2Q5VT97 1194 aa16.99■□□□□ 0.31
PTPRN-206ENST00000442029 TTBK2Q6IQ55 1244 aa16.99■□□□□ 0.31
PTPRN-206ENST00000442029 IQCA1Q86XH1 822 aa16.99■□□□□ 0.31
PTPRN-206ENST00000442029 LENG1Q96BZ8 264 aaPredicted RBP16.99■□□□□ 0.31
PTPRN-206ENST00000442029 DSCC1Q9BVC3 393 aa16.99■□□□□ 0.31
PTPRN-206ENST00000442029 CTNNA3Q9UI47 895 aa16.99■□□□□ 0.31
PTPRN-206ENST00000442029 PHF24Q9UPV7 400 aa16.99■□□□□ 0.31
PTPRN-206ENST00000442029 RANBP2P49792 3224 aaKnown RBP16.99■□□□□ 0.31
PTPRN-206ENST00000442029 NEDD4P46934 1319 aa16.98■□□□□ 0.31
PTPRN-206ENST00000442029 SYNRGQ9UMZ2 1314 aa16.98■□□□□ 0.31
PTPRN-206ENST00000442029 ASB14A6NK59 587 aa16.98■□□□□ 0.31
PTPRN-206ENST00000442029 DUSP11O75319 330 aaKnown RBP16.98■□□□□ 0.31
PTPRN-206ENST00000442029 ICAM1P05362 532 aa16.98■□□□□ 0.31
PTPRN-206ENST00000442029 PDHBP11177 359 aa16.98■□□□□ 0.31
PTPRN-206ENST00000442029 CNTN2Q02246 1040 aa16.98■□□□□ 0.31
PTPRN-206ENST00000442029 BTNL9Q6UXG8 535 aa16.98■□□□□ 0.31
PTPRN-206ENST00000442029 NSMFQ6X4W1 530 aa16.98■□□□□ 0.31
PTPRN-206ENST00000442029 CCDC144CPQ8IYA2 1237 aa16.98■□□□□ 0.31
PTPRN-206ENST00000442029 FAM133AQ8N9E0 248 aa16.98■□□□□ 0.31
PTPRN-206ENST00000442029 ZKSCAN3Q9BRR0 538 aa16.98■□□□□ 0.31
PTPRN-206ENST00000442029 RANBP17Q9H2T7 1088 aaKnown RBP16.98■□□□□ 0.31
PTPRN-206ENST00000442029 ADAMTS4O75173 837 aa16.97■□□□□ 0.31
PTPRN-206ENST00000442029 C6orf222P0C671 652 aaPredicted RBP16.97■□□□□ 0.31
PTPRN-206ENST00000442029 SNX17Q15036 470 aa16.97■□□□□ 0.31
PTPRN-206ENST00000442029 CCDC144BQ3MJ40 725 aa16.97■□□□□ 0.31
PTPRN-206ENST00000442029 TTC22Q5TAA0 569 aa16.97■□□□□ 0.31
PTPRN-206ENST00000442029 NUP133Q8WUM0 1156 aa16.97■□□□□ 0.31
PTPRN-206ENST00000442029 FGD4Q96M96 766 aa16.97■□□□□ 0.31
PTPRN-206ENST00000442029 TSEN34Q9BSV6 310 aaKnown RBP16.97■□□□□ 0.31
PTPRN-206ENST00000442029 STARD7Q9NQZ5 370 aa16.97■□□□□ 0.31
PTPRN-206ENST00000442029 PNMA2Q9UL42 364 aa16.97■□□□□ 0.31
PTPRN-206ENST00000442029 A0A1W2PQ45 241 aaPredicted RBP16.96■□□□□ 0.31
PTPRN-206ENST00000442029 A0A1W2PQY0 241 aa16.96■□□□□ 0.31
PTPRN-206ENST00000442029 MOXD2PA6NHM9 499 aa16.96■□□□□ 0.31
PTPRN-206ENST00000442029 SOX1O00570 391 aaPredicted RBP16.96■□□□□ 0.31
PTPRN-206ENST00000442029 KDM4AO75164 1064 aa16.96■□□□□ 0.31
PTPRN-206ENST00000442029 MUM1L1Q5H9M0 696 aa16.96■□□□□ 0.31
PTPRN-206ENST00000442029 C1orf53Q5VUE5 145 aa16.96■□□□□ 0.31
PTPRN-206ENST00000442029 NOL8Q76FK4 1167 aaKnown RBP16.96■□□□□ 0.31
PTPRN-206ENST00000442029 DGKHQ86XP1 1220 aa16.96■□□□□ 0.31
PTPRN-206ENST00000442029 PCSK9Q8NBP7 692 aaKnown RBP16.96■□□□□ 0.31
PTPRN-206ENST00000442029 LRCH3Q96II8 777 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms