RNA–Protein interactions for RNA: ENST00000440452.5

PCGF3-207, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 3,609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-207ENST00000440452 IDEP14735 1019 aa13.87□□□□□ -0.19
PCGF3-207ENST00000440452 DPYDQ12882 1025 aa13.87□□□□□ -0.19
PCGF3-207ENST00000440452 E2F5Q15329 346 aa13.87□□□□□ -0.19
PCGF3-207ENST00000440452 AMOTL1Q8IY63 956 aa13.87□□□□□ -0.19
PCGF3-207ENST00000440452 BCCIPQ9P287 314 aaKnown RBP eCLIP13.87□□□□□ -0.19
PCGF3-207ENST00000440452 STK36Q9NRP7 1315 aa13.87□□□□□ -0.19
PCGF3-207ENST00000440452 NTSR2O95665 410 aa13.87□□□□□ -0.19
PCGF3-207ENST00000440452 TRIM21P19474 475 aaKnown RBP13.87□□□□□ -0.19
PCGF3-207ENST00000440452 HNRNPH1P31943 449 aaKnown RBP13.87□□□□□ -0.19
PCGF3-207ENST00000440452 PAK1Q13153 545 aa13.87□□□□□ -0.19
PCGF3-207ENST00000440452 CCDC122Q5T0U0 273 aa13.87□□□□□ -0.19
PCGF3-207ENST00000440452 SAMD1Q6SPF0 538 aaPredicted RBP13.87□□□□□ -0.19
PCGF3-207ENST00000440452 MYO1FO00160 1098 aa13.87□□□□□ -0.19
PCGF3-207ENST00000440452 KRT31Q15323 416 aa13.87□□□□□ -0.19
PCGF3-207ENST00000440452 TBC1D9BQ66K14 1250 aa13.87□□□□□ -0.19
PCGF3-207ENST00000440452 PTF1AQ7RTS3 328 aa13.87□□□□□ -0.19
PCGF3-207ENST00000440452 PNMA1Q8ND90 353 aa13.87□□□□□ -0.19
PCGF3-207ENST00000440452 HPS3Q969F9 1004 aa13.87□□□□□ -0.19
PCGF3-207ENST00000440452 PDCLQ13371 301 aa13.86□□□□□ -0.19
PCGF3-207ENST00000440452 DTHD1Q6ZMT9 781 aa13.86□□□□□ -0.19
PCGF3-207ENST00000440452 MARCH10Q8NA82 808 aaPredicted RBP13.86□□□□□ -0.19
PCGF3-207ENST00000440452 DCP1AQ9NPI6 582 aaPredicted RBP13.86□□□□□ -0.19
PCGF3-207ENST00000440452 KCNJ18B7U540 433 aa13.86□□□□□ -0.19
PCGF3-207ENST00000440452 RPSAP08865 295 aaKnown RBP13.86□□□□□ -0.19
PCGF3-207ENST00000440452 HPDP32754 393 aaPredicted RBP13.86□□□□□ -0.19
PCGF3-207ENST00000440452 TROAPQ12815 778 aa13.86□□□□□ -0.19
PCGF3-207ENST00000440452 PICALMQ13492 652 aa13.86□□□□□ -0.19
PCGF3-207ENST00000440452 KCNJ12Q14500 433 aa13.86□□□□□ -0.19
PCGF3-207ENST00000440452 SEC23AQ15436 765 aa13.86□□□□□ -0.19
PCGF3-207ENST00000440452 ODF2Q5BJF6 829 aa13.86□□□□□ -0.19
PCGF3-207ENST00000440452 N4BP2L2Q92802 583 aaPredicted RBP13.86□□□□□ -0.19
PCGF3-207ENST00000440452 PLCD4Q9BRC7 762 aa13.86□□□□□ -0.19
PCGF3-207ENST00000440452 ZHX3Q9H4I2 956 aa13.86□□□□□ -0.19
PCGF3-207ENST00000440452 ADGRG1Q9Y653 693 aa13.86□□□□□ -0.19
PCGF3-207ENST00000440452 TRPM3Q9HCF6 1732 aaPredicted RBP13.86□□□□□ -0.19
PCGF3-207ENST00000440452 SIPA1L3O60292 1781 aaPredicted RBP13.86□□□□□ -0.19
PCGF3-207ENST00000440452 GOLGA6L7A0A1B0GV03 622 aa13.85□□□□□ -0.19
PCGF3-207ENST00000440452 GBP2P32456 591 aaPredicted RBP13.85□□□□□ -0.19
PCGF3-207ENST00000440452 KCNJ6P48051 423 aa13.85□□□□□ -0.19
PCGF3-207ENST00000440452 TMTC3Q6ZXV5 915 aa13.85□□□□□ -0.19
PCGF3-207ENST00000440452 KIRREL3Q8IZU9 778 aa13.85□□□□□ -0.19
PCGF3-207ENST00000440452 CCDC114Q96M63 670 aa13.85□□□□□ -0.19
PCGF3-207ENST00000440452 CHP1Q99653 195 aa13.85□□□□□ -0.19
PCGF3-207ENST00000440452 PHF20Q9BVI0 1012 aa13.85□□□□□ -0.19
PCGF3-207ENST00000440452 UBA5Q9GZZ9 404 aa13.85□□□□□ -0.19
PCGF3-207ENST00000440452 KIF5BP33176 963 aa13.85□□□□□ -0.19
PCGF3-207ENST00000440452 MTIF2P46199 727 aaKnown RBP13.85□□□□□ -0.19
PCGF3-207ENST00000440452 NAPAP54920 295 aa13.85□□□□□ -0.19
PCGF3-207ENST00000440452 ASIC1P78348 528 aa13.85□□□□□ -0.19
PCGF3-207ENST00000440452 NR1I3Q14994 352 aa13.85□□□□□ -0.19
PCGF3-207ENST00000440452 RIOK1Q9BRS2 568 aaKnown RBP13.85□□□□□ -0.19
PCGF3-207ENST00000440452 TANGO6Q9C0B7 1094 aa13.85□□□□□ -0.19
PCGF3-207ENST00000440452 PRPF3O43395 683 aaKnown RBP13.85□□□□□ -0.19
PCGF3-207ENST00000440452 C8orf37Q96NL8 207 aa13.85□□□□□ -0.19
PCGF3-207ENST00000440452 RBM28Q9NW13 759 aaKnown RBP13.85□□□□□ -0.19
PCGF3-207ENST00000440452 PNPLA7Q6ZV29 1317 aa13.85□□□□□ -0.19
PCGF3-207ENST00000440452 MAP2K7O14733 419 aa13.84□□□□□ -0.19
PCGF3-207ENST00000440452 CCNT1O60563 726 aaKnown RBP13.84□□□□□ -0.19
PCGF3-207ENST00000440452 RPN1P04843 607 aaKnown RBP13.84□□□□□ -0.19
PCGF3-207ENST00000440452 CLNS1AP54105 237 aaKnown RBP13.84□□□□□ -0.19
PCGF3-207ENST00000440452 DYMQ7RTS9 669 aa13.84□□□□□ -0.19
PCGF3-207ENST00000440452 TMEM139Q8IV31 216 aa13.84□□□□□ -0.19
PCGF3-207ENST00000440452 FERMT2Q96AC1 680 aa13.84□□□□□ -0.19
PCGF3-207ENST00000440452 CTAGE1Q96RT6 745 aa13.84□□□□□ -0.19
PCGF3-207ENST00000440452 CD248Q9HCU0 757 aa13.84□□□□□ -0.19
PCGF3-207ENST00000440452 PRCPP42785 496 aa13.84□□□□□ -0.19
PCGF3-207ENST00000440452 MAATS1Q7Z4T9 603 aa13.84□□□□□ -0.19
PCGF3-207ENST00000440452 POTEDQ86YR6 584 aa13.84□□□□□ -0.19
PCGF3-207ENST00000440452 BLIDQ8IZY5 108 aa13.84□□□□□ -0.19
PCGF3-207ENST00000440452 IFT81Q8WYA0 676 aa13.84□□□□□ -0.19
PCGF3-207ENST00000440452 KIFC2Q96AC6 838 aa13.84□□□□□ -0.19
PCGF3-207ENST00000440452 BCL9O00512 1426 aa13.84□□□□□ -0.19
PCGF3-207ENST00000440452 CALM1P0DP23 149 aa13.84□□□□□ -0.19
PCGF3-207ENST00000440452 CALM2P0DP24 149 aa13.84□□□□□ -0.19
PCGF3-207ENST00000440452 CALM3P0DP25 149 aa13.84□□□□□ -0.19
PCGF3-207ENST00000440452 ZNF18P17022 549 aa13.84□□□□□ -0.19
PCGF3-207ENST00000440452 ERCC5P28715 1186 aaPredicted RBP13.84□□□□□ -0.19
PCGF3-207ENST00000440452 PEX19P40855 299 aa13.84□□□□□ -0.19
PCGF3-207ENST00000440452 CNGA4Q8IV77 575 aa13.84□□□□□ -0.19
PCGF3-207ENST00000440452 RNF225M0QZC1 329 aaPredicted RBP13.83□□□□□ -0.19
PCGF3-207ENST00000440452 MFAP3LO75121 409 aa13.83□□□□□ -0.19
PCGF3-207ENST00000440452 GYPCP04921 128 aa13.83□□□□□ -0.19
PCGF3-207ENST00000440452 LDHBP07195 334 aaKnown RBP13.83□□□□□ -0.19
PCGF3-207ENST00000440452 SCP2P22307 547 aa13.83□□□□□ -0.19
PCGF3-207ENST00000440452 TECP42680 631 aa13.83□□□□□ -0.19
PCGF3-207ENST00000440452 TXKP42681 527 aa13.83□□□□□ -0.19
PCGF3-207ENST00000440452 COPB1P53618 953 aaKnown RBP13.83□□□□□ -0.19
PCGF3-207ENST00000440452 TRIML1Q8N9V2 468 aa13.83□□□□□ -0.19
PCGF3-207ENST00000440452 NSUN4Q96CB9 384 aaKnown RBP13.83□□□□□ -0.19
PCGF3-207ENST00000440452 GSDMAQ96QA5 445 aa13.83□□□□□ -0.19
PCGF3-207ENST00000440452 XDHP47989 1333 aa13.83□□□□□ -0.2
PCGF3-207ENST00000440452 B4DLN1 442 aa13.83□□□□□ -0.2
PCGF3-207ENST00000440452 HSF2BPO75031 334 aa13.83□□□□□ -0.2
PCGF3-207ENST00000440452 MCM3P25205 808 aa13.83□□□□□ -0.2
PCGF3-207ENST00000440452 RNASE9P60153 205 aaKnown RBP13.83□□□□□ -0.2
PCGF3-207ENST00000440452 SLC7A5Q01650 507 aa13.83□□□□□ -0.2
PCGF3-207ENST00000440452 CYP27A1Q02318 531 aa13.83□□□□□ -0.2
PCGF3-207ENST00000440452 WHAMMP3Q1A5X7 153 aa13.83□□□□□ -0.2
PCGF3-207ENST00000440452 SOGA3Q5TF21 947 aa13.83□□□□□ -0.2
PCGF3-207ENST00000440452 LRCH2Q5VUJ6 765 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms