RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 ZNF467Q7Z7K2 595 aaPredicted RBP18.96■□□□□ 0.63
ITGB1-207ENST00000439974 CHST13Q8NET6 341 aa18.96■□□□□ 0.63
ITGB1-207ENST00000439974 FERMT2Q96AC1 680 aa18.96■□□□□ 0.63
ITGB1-207ENST00000439974 GMCL1Q96IK5 515 aa18.96■□□□□ 0.63
ITGB1-207ENST00000439974 LTBP2Q14767 1821 aa18.95■□□□□ 0.62
ITGB1-207ENST00000439974 TMEM232C9JQI7 657 aa18.95■□□□□ 0.62
ITGB1-207ENST00000439974 PGK1P00558 417 aa18.95■□□□□ 0.62
ITGB1-207ENST00000439974 SLC1A4P43007 532 aa18.95■□□□□ 0.62
ITGB1-207ENST00000439974 MFAP1P55081 439 aaKnown RBP18.95■□□□□ 0.62
ITGB1-207ENST00000439974 ERICH6BQ5W0A0 696 aa18.95■□□□□ 0.62
ITGB1-207ENST00000439974 FAM160B2Q86V87 743 aa18.95■□□□□ 0.62
ITGB1-207ENST00000439974 ANKRD35Q8N283 1001 aa18.95■□□□□ 0.62
ITGB1-207ENST00000439974 ANAPC4Q9UJX5 808 aa18.95■□□□□ 0.62
ITGB1-207ENST00000439974 STX8Q9UNK0 236 aa18.95■□□□□ 0.62
ITGB1-207ENST00000439974 SNAI1O95863 264 aaPredicted RBP18.94■□□□□ 0.62
ITGB1-207ENST00000439974 PTH1RQ03431 593 aa18.94■□□□□ 0.62
ITGB1-207ENST00000439974 RRP12Q5JTH9 1297 aaKnown RBP18.94■□□□□ 0.62
ITGB1-207ENST00000439974 TBC1D10CQ8IV04 446 aa18.94■□□□□ 0.62
ITGB1-207ENST00000439974 CHURC1Q8WUH1 139 aa18.94■□□□□ 0.62
ITGB1-207ENST00000439974 STAG1Q8WVM7 1258 aa18.94■□□□□ 0.62
ITGB1-207ENST00000439974 PRDM5Q9NQX1 630 aaPredicted RBP18.94■□□□□ 0.62
ITGB1-207ENST00000439974 TOMM22Q9NS69 142 aa18.94■□□□□ 0.62
ITGB1-207ENST00000439974 ZHX1Q9UKY1 873 aaPredicted RBP18.94■□□□□ 0.62
ITGB1-207ENST00000439974 FAM184BQ9ULE4 1060 aa18.94■□□□□ 0.62
ITGB1-207ENST00000439974 RANBP6O60518 1105 aaKnown RBP18.93■□□□□ 0.62
ITGB1-207ENST00000439974 ADAMTS4O75173 837 aa18.93■□□□□ 0.62
ITGB1-207ENST00000439974 MCCP23508 829 aa18.93■□□□□ 0.62
ITGB1-207ENST00000439974 IKQ13123 557 aaPredicted RBP18.93■□□□□ 0.62
ITGB1-207ENST00000439974 BMP2KLQ5H9B9 411 aa18.93■□□□□ 0.62
ITGB1-207ENST00000439974 DEFB123Q8N688 67 aa18.93■□□□□ 0.62
ITGB1-207ENST00000439974 LENG1Q96BZ8 264 aaPredicted RBP18.93■□□□□ 0.62
ITGB1-207ENST00000439974 CHMP4CQ96CF2 233 aa18.93■□□□□ 0.62
ITGB1-207ENST00000439974 PDLIM7Q9NR12 457 aa18.93■□□□□ 0.62
ITGB1-207ENST00000439974 MCM3APO60318 1980 aa18.93■□□□□ 0.62
ITGB1-207ENST00000439974 SGSM2O43147 1006 aa18.92■□□□□ 0.62
ITGB1-207ENST00000439974 ORC4O43929 436 aa18.92■□□□□ 0.62
ITGB1-207ENST00000439974 NMT2O60551 498 aa18.92■□□□□ 0.62
ITGB1-207ENST00000439974 PLA2G6O60733 806 aa18.92■□□□□ 0.62
ITGB1-207ENST00000439974 RUFY2Q8WXA3 655 aa18.92■□□□□ 0.62
ITGB1-207ENST00000439974 FGD4Q96M96 766 aa18.92■□□□□ 0.62
ITGB1-207ENST00000439974 TSEN34Q9BSV6 310 aaKnown RBP18.92■□□□□ 0.62
ITGB1-207ENST00000439974 ACAD9Q9H845 621 aa18.92■□□□□ 0.62
ITGB1-207ENST00000439974 IL17RBQ9NRM6 502 aa18.92■□□□□ 0.62
ITGB1-207ENST00000439974 HOMER2Q9NSB8 354 aa18.92■□□□□ 0.62
ITGB1-207ENST00000439974 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.92■□□□□ 0.62
ITGB1-207ENST00000439974 SYNRGQ9UMZ2 1314 aa18.92■□□□□ 0.62
ITGB1-207ENST00000439974 A0A1W2PQ45 241 aaPredicted RBP18.91■□□□□ 0.62
ITGB1-207ENST00000439974 A0A1W2PQY0 241 aa18.91■□□□□ 0.62
ITGB1-207ENST00000439974 FGRP09769 529 aa18.91■□□□□ 0.62
ITGB1-207ENST00000439974 TLE2Q04725 743 aa18.91■□□□□ 0.62
ITGB1-207ENST00000439974 ACVR2BQ13705 512 aa18.91■□□□□ 0.62
ITGB1-207ENST00000439974 TKFCQ3LXA3 575 aa18.91■□□□□ 0.62
ITGB1-207ENST00000439974 RCSD1Q6JBY9 416 aa18.91■□□□□ 0.62
ITGB1-207ENST00000439974 KCTD1Q719H9 257 aa18.91■□□□□ 0.62
ITGB1-207ENST00000439974 DSCC1Q9BVC3 393 aa18.91■□□□□ 0.62
ITGB1-207ENST00000439974 ABHD16BQ9H3Z7 469 aa18.91■□□□□ 0.62
ITGB1-207ENST00000439974 RNF146Q9NTX7 359 aa18.91■□□□□ 0.62
ITGB1-207ENST00000439974 ZNF536O15090 1300 aa18.91■□□□□ 0.62
ITGB1-207ENST00000439974 RAD50Q92878 1312 aa18.91■□□□□ 0.62
ITGB1-207ENST00000439974 COL6A3P12111 3177 aa18.91■□□□□ 0.62
ITGB1-207ENST00000439974 MOXD2PA6NHM9 499 aa18.9■□□□□ 0.62
ITGB1-207ENST00000439974 ZNF213O14771 459 aa18.9■□□□□ 0.62
ITGB1-207ENST00000439974 DUSP11O75319 330 aaKnown RBP18.9■□□□□ 0.62
ITGB1-207ENST00000439974 NOVP48745 357 aa18.9■□□□□ 0.62
ITGB1-207ENST00000439974 Q7L0L9 218 aa18.9■□□□□ 0.62
ITGB1-207ENST00000439974 ARMCX2Q7L311 632 aa18.9■□□□□ 0.62
ITGB1-207ENST00000439974 KLHDC9Q8NEP7 349 aa18.9■□□□□ 0.62
ITGB1-207ENST00000439974 AGBL1Q96MI9 1066 aa18.9■□□□□ 0.62
ITGB1-207ENST00000439974 ZMYM6O95789 1325 aa18.9■□□□□ 0.62
ITGB1-207ENST00000439974 NEDD4P46934 1319 aa18.9■□□□□ 0.62
ITGB1-207ENST00000439974 TRIM43BA6NCK2 446 aa18.89■□□□□ 0.61
ITGB1-207ENST00000439974 POTEB2H3BUK9 544 aa18.89■□□□□ 0.61
ITGB1-207ENST00000439974 ACLYP53396 1101 aa18.89■□□□□ 0.61
ITGB1-207ENST00000439974 SH3RF1Q7Z6J0 888 aa18.89■□□□□ 0.61
ITGB1-207ENST00000439974 NUP133Q8WUM0 1156 aa18.89■□□□□ 0.61
ITGB1-207ENST00000439974 DCAF4Q8WV16 495 aa18.89■□□□□ 0.61
ITGB1-207ENST00000439974 BADQ92934 168 aa18.89■□□□□ 0.61
ITGB1-207ENST00000439974 TRIM43Q96BQ3 446 aaPredicted RBP18.89■□□□□ 0.61
ITGB1-207ENST00000439974 ESYT1Q9BSJ8 1104 aa18.89■□□□□ 0.61
ITGB1-207ENST00000439974 A1CFQ9NQ94 594 aaKnown RBP18.89■□□□□ 0.61
ITGB1-207ENST00000439974 STARD7Q9NQZ5 370 aa18.89■□□□□ 0.61
ITGB1-207ENST00000439974 PRR12Q9ULL5 1215 aa18.89■□□□□ 0.61
ITGB1-207ENST00000439974 CLTBP09497 229 aa18.88■□□□□ 0.61
ITGB1-207ENST00000439974 CST5P28325 142 aaPredicted RBP18.88■□□□□ 0.61
ITGB1-207ENST00000439974 CNTN2Q02246 1040 aa18.88■□□□□ 0.61
ITGB1-207ENST00000439974 AKNAD1Q5T1N1 836 aa18.88■□□□□ 0.61
ITGB1-207ENST00000439974 CCDC174Q6PII3 467 aa18.88■□□□□ 0.61
ITGB1-207ENST00000439974 RASGRP2Q7LDG7 609 aa18.88■□□□□ 0.61
ITGB1-207ENST00000439974 CCDC144CPQ8IYA2 1237 aa18.88■□□□□ 0.61
ITGB1-207ENST00000439974 FAM133AQ8N9E0 248 aa18.88■□□□□ 0.61
ITGB1-207ENST00000439974 TRERF1Q96PN7 1200 aa18.88■□□□□ 0.61
ITGB1-207ENST00000439974 SPC25Q9HBM1 224 aa18.88■□□□□ 0.61
ITGB1-207ENST00000439974 MTMR10Q9NXD2 777 aa18.88■□□□□ 0.61
ITGB1-207ENST00000439974 MTMR7Q9Y216 660 aa18.88■□□□□ 0.61
ITGB1-207ENST00000439974 TAF6LQ9Y6J9 622 aa18.88■□□□□ 0.61
ITGB1-207ENST00000439974 PQBP1O60828 265 aaKnown RBP18.87■□□□□ 0.61
ITGB1-207ENST00000439974 ALAS1P13196 640 aa18.87■□□□□ 0.61
ITGB1-207ENST00000439974 KCNA10Q16322 511 aa18.87■□□□□ 0.61
ITGB1-207ENST00000439974 CCDC96Q2M329 555 aa18.87■□□□□ 0.61
ITGB1-207ENST00000439974 CCDC144BQ3MJ40 725 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms