RNA–Protein interactions for RNA: ENST00000439600.2

LMO3-207, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,044 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-207ENST00000439600 SHMT1P34896 483 aa12.73□□□□□ -0.37
LMO3-207ENST00000439600 CAP2P40123 477 aa12.73□□□□□ -0.37
LMO3-207ENST00000439600 FGD1P98174 961 aa12.73□□□□□ -0.37
LMO3-207ENST00000439600 ANKRD1Q15327 319 aa12.73□□□□□ -0.37
LMO3-207ENST00000439600 MAP3K11Q16584 847 aa12.73□□□□□ -0.37
LMO3-207ENST00000439600 ABCB5Q2M3G0 1257 aa12.73□□□□□ -0.37
LMO3-207ENST00000439600 CRTC2Q53ET0 693 aaPredicted RBP12.73□□□□□ -0.37
LMO3-207ENST00000439600 PRAMEF18Q5VWM3 479 aa12.73□□□□□ -0.37
LMO3-207ENST00000439600 TMEM179Q6ZVK1 233 aa12.73□□□□□ -0.37
LMO3-207ENST00000439600 RUFY3Q7L099 469 aa12.73□□□□□ -0.37
LMO3-207ENST00000439600 TBC1D10CQ8IV04 446 aa12.73□□□□□ -0.37
LMO3-207ENST00000439600 STK11IPQ8N1F8 1099 aa12.73□□□□□ -0.37
LMO3-207ENST00000439600 EHBP1Q8NDI1 1231 aa12.73□□□□□ -0.37
LMO3-207ENST00000439600 NEDD1Q8NHV4 660 aa12.73□□□□□ -0.37
LMO3-207ENST00000439600 FAM200AQ8TCP9 573 aa12.73□□□□□ -0.37
LMO3-207ENST00000439600 UBAC1Q9BSL1 405 aa12.73□□□□□ -0.37
LMO3-207ENST00000439600 KANSL2Q9H9L4 492 aa12.73□□□□□ -0.37
LMO3-207ENST00000439600 DNAAF2Q9NVR5 837 aaKnown RBP12.73□□□□□ -0.37
LMO3-207ENST00000439600 ZSWIM5Q9P217 1185 aa12.73□□□□□ -0.37
LMO3-207ENST00000439600 SCAF8Q9UPN6 1271 aaKnown RBP12.73□□□□□ -0.37
LMO3-207ENST00000439600 B4E1Z4 1266 aa12.72□□□□□ -0.37
LMO3-207ENST00000439600 MPHOSPH10O00566 681 aaKnown RBP12.72□□□□□ -0.37
LMO3-207ENST00000439600 USP2O75604 605 aaPredicted RBP12.72□□□□□ -0.37
LMO3-207ENST00000439600 PRDM1O75626 825 aa12.72□□□□□ -0.37
LMO3-207ENST00000439600 CASTP20810 708 aaKnown RBP12.72□□□□□ -0.37
LMO3-207ENST00000439600 OXLD1Q5BKU9 147 aa12.72□□□□□ -0.37
LMO3-207ENST00000439600 TMEM164Q5U3C3 297 aa12.72□□□□□ -0.37
LMO3-207ENST00000439600 VASH1Q7L8A9 365 aaPredicted RBP12.72□□□□□ -0.37
LMO3-207ENST00000439600 DGKHQ86XP1 1220 aa12.72□□□□□ -0.37
LMO3-207ENST00000439600 ANKMY2Q8IV38 441 aa12.72□□□□□ -0.37
LMO3-207ENST00000439600 ANKRD13AQ8IZ07 590 aa12.72□□□□□ -0.37
LMO3-207ENST00000439600 CHMP4CQ96CF2 233 aa12.72□□□□□ -0.37
LMO3-207ENST00000439600 CDK15Q96Q40 435 aa12.72□□□□□ -0.37
LMO3-207ENST00000439600 ALDH8A1Q9H2A2 487 aaPredicted RBP12.72□□□□□ -0.37
LMO3-207ENST00000439600 PICK1Q9NRD5 415 aa12.72□□□□□ -0.37
LMO3-207ENST00000439600 PCDHB11Q9Y5F2 797 aa12.72□□□□□ -0.37
LMO3-207ENST00000439600 CSADQ9Y600 493 aa12.72□□□□□ -0.37
LMO3-207ENST00000439600 AK9Q5TCS8 1911 aa12.71□□□□□ -0.37
LMO3-207ENST00000439600 PHF20L1A8MW92 1017 aa12.71□□□□□ -0.37
LMO3-207ENST00000439600 RPS6KB1P23443 525 aa12.71□□□□□ -0.37
LMO3-207ENST00000439600 NEK4P51957 841 aa12.71□□□□□ -0.37
LMO3-207ENST00000439600 EXOSC10Q01780 885 aaKnown RBP12.71□□□□□ -0.37
LMO3-207ENST00000439600 ADCK5Q3MIX3 580 aa12.71□□□□□ -0.37
LMO3-207ENST00000439600 FBXL16Q8N461 479 aa12.71□□□□□ -0.37
LMO3-207ENST00000439600 WRNIP1Q96S55 665 aa12.71□□□□□ -0.37
LMO3-207ENST00000439600 ZSCAN10Q96SZ4 725 aaPredicted RBP12.71□□□□□ -0.37
LMO3-207ENST00000439600 SH2D4AQ9H788 454 aa12.71□□□□□ -0.37
LMO3-207ENST00000439600 AS3MTQ9HBK9 375 aa12.71□□□□□ -0.37
LMO3-207ENST00000439600 GBA2Q9HCG7 927 aaPredicted RBP12.71□□□□□ -0.37
LMO3-207ENST00000439600 INCENPQ9NQS7 918 aa12.71□□□□□ -0.37
LMO3-207ENST00000439600 PDRG1Q9NUG6 133 aa12.71□□□□□ -0.37
LMO3-207ENST00000439600 SYNPO2Q9UMS6 1093 aa12.71□□□□□ -0.37
LMO3-207ENST00000439600 ANGEL1Q9UNK9 670 aaKnown RBP12.71□□□□□ -0.37
LMO3-207ENST00000439600 IFIT3O14879 490 aaKnown RBP12.7□□□□□ -0.38
LMO3-207ENST00000439600 PRC1O43663 620 aa12.7□□□□□ -0.38
LMO3-207ENST00000439600 CELF2O95319 508 aaKnown RBP12.7□□□□□ -0.38
LMO3-207ENST00000439600 MCM2P49736 904 aa12.7□□□□□ -0.38
LMO3-207ENST00000439600 NOL9Q5SY16 702 aaKnown RBP12.7□□□□□ -0.38
LMO3-207ENST00000439600 SYNE3Q6ZMZ3 975 aa12.7□□□□□ -0.38
LMO3-207ENST00000439600 STOX1Q6ZVD7 989 aa12.7□□□□□ -0.38
LMO3-207ENST00000439600 MB21D2Q8IYB1 491 aaPredicted RBP12.7□□□□□ -0.38
LMO3-207ENST00000439600 SCYL3Q8IZE3 742 aa12.7□□□□□ -0.38
LMO3-207ENST00000439600 SIX5Q8N196 739 aa12.7□□□□□ -0.38
LMO3-207ENST00000439600 SLC44A5Q8NCS7 719 aa12.7□□□□□ -0.38
LMO3-207ENST00000439600 STK32AQ8WU08 396 aa12.7□□□□□ -0.38
LMO3-207ENST00000439600 ANKS1AQ92625 1134 aa12.7□□□□□ -0.38
LMO3-207ENST00000439600 DNAJC18Q9H819 358 aa12.7□□□□□ -0.38
LMO3-207ENST00000439600 ZNF408Q9H9D4 720 aa12.7□□□□□ -0.38
LMO3-207ENST00000439600 MYH7P12883 1935 aa12.7□□□□□ -0.38
LMO3-207ENST00000439600 NEDD4P46934 1319 aa12.69□□□□□ -0.38
LMO3-207ENST00000439600 TRAF5O00463 557 aa12.69□□□□□ -0.38
LMO3-207ENST00000439600 TTLL1O95922 423 aa12.69□□□□□ -0.38
LMO3-207ENST00000439600 GH2P01242 217 aa12.69□□□□□ -0.38
LMO3-207ENST00000439600 LIFRP42702 1097 aa12.69□□□□□ -0.38
LMO3-207ENST00000439600 CLDN10P78369 228 aa12.69□□□□□ -0.38
LMO3-207ENST00000439600 TMEM67Q5HYA8 995 aa12.69□□□□□ -0.38
LMO3-207ENST00000439600 FAM47AQ5JRC9 791 aa12.69□□□□□ -0.38
LMO3-207ENST00000439600 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.69□□□□□ -0.38
LMO3-207ENST00000439600 ARHGEF10LQ9HCE6 1279 aa12.69□□□□□ -0.38
LMO3-207ENST00000439600 MTMR4Q9NYA4 1195 aa12.69□□□□□ -0.38
LMO3-207ENST00000439600 NYAP2Q9P242 653 aa12.69□□□□□ -0.38
LMO3-207ENST00000439600 MYO5AQ9Y4I1 1855 aaKnown RBP12.69□□□□□ -0.38
LMO3-207ENST00000439600 CCDC69A6NI79 296 aa12.68□□□□□ -0.38
LMO3-207ENST00000439600 SMIM22K7EJ46 135 aa12.68□□□□□ -0.38
LMO3-207ENST00000439600 MYCP01106 439 aaPredicted RBP12.68□□□□□ -0.38
LMO3-207ENST00000439600 AKR1B1P15121 316 aa12.68□□□□□ -0.38
LMO3-207ENST00000439600 DHX9Q08211 1270 aaKnown RBP12.68□□□□□ -0.38
LMO3-207ENST00000439600 MMRN1Q13201 1228 aa12.68□□□□□ -0.38
LMO3-207ENST00000439600 PRKG1Q13976 671 aa12.68□□□□□ -0.38
LMO3-207ENST00000439600 WTAPQ15007 396 aa12.68□□□□□ -0.38
LMO3-207ENST00000439600 RAB3GAP1Q15042 981 aa12.68□□□□□ -0.38
LMO3-207ENST00000439600 PPP2R5BQ15173 497 aa12.68□□□□□ -0.38
LMO3-207ENST00000439600 SWI5Q1ZZU3 235 aa12.68□□□□□ -0.38
LMO3-207ENST00000439600 LDLRAD1Q5T700 205 aa12.68□□□□□ -0.38
LMO3-207ENST00000439600 IFIT1BQ5T764 474 aaKnown RBP12.68□□□□□ -0.38
LMO3-207ENST00000439600 IGDCC4Q8TDY8 1250 aa12.68□□□□□ -0.38
LMO3-207ENST00000439600 MKL1Q969V6 931 aa12.68□□□□□ -0.38
LMO3-207ENST00000439600 ZBTB21Q9ULJ3 1066 aa12.68□□□□□ -0.38
LMO3-207ENST00000439600 STX8Q9UNK0 236 aa12.68□□□□□ -0.38
LMO3-207ENST00000439600 RBM19Q9Y4C8 960 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms