RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 GNPTABQ3T906 1256 aa17.55■□□□□ 0.4
DHFR-201ENST00000439211 NKX2-3Q8TAU0 364 aa17.55■□□□□ 0.4
DHFR-201ENST00000439211 EPB41L4AQ9HCS5 686 aaPredicted RBP17.55■□□□□ 0.4
DHFR-201ENST00000439211 TAB2Q9NYJ8 693 aa17.55■□□□□ 0.4
DHFR-201ENST00000439211 TEX33O43247 280 aa17.55■□□□□ 0.4
DHFR-201ENST00000439211 CLTAP09496 248 aa17.55■□□□□ 0.4
DHFR-201ENST00000439211 CDC25AP30304 524 aa17.55■□□□□ 0.4
DHFR-201ENST00000439211 TBC1D8BQ0IIM8 1120 aa17.55■□□□□ 0.4
DHFR-201ENST00000439211 CCDC13Q8IYE1 715 aa17.55■□□□□ 0.4
DHFR-201ENST00000439211 KIFC2Q96AC6 838 aa17.55■□□□□ 0.4
DHFR-201ENST00000439211 CTAGE1Q96RT6 745 aa17.55■□□□□ 0.4
DHFR-201ENST00000439211 VIPAS39Q9H9C1 493 aa17.55■□□□□ 0.4
DHFR-201ENST00000439211 TTF2Q9UNY4 1162 aaKnown RBP17.55■□□□□ 0.4
DHFR-201ENST00000439211 GSG1L2A8MUP6 293 aa17.54■□□□□ 0.4
DHFR-201ENST00000439211 FAM47AQ5JRC9 791 aa17.54■□□□□ 0.4
DHFR-201ENST00000439211 CCDC26Q8TAB7 109 aa17.54■□□□□ 0.4
DHFR-201ENST00000439211 SLF1Q9BQI6 1058 aa17.54■□□□□ 0.4
DHFR-201ENST00000439211 FOXP1Q9H334 677 aaPredicted RBP17.54■□□□□ 0.4
DHFR-201ENST00000439211 MED1Q15648 1581 aaPredicted RBP17.54■□□□□ 0.4
DHFR-201ENST00000439211 RBL2Q08999 1139 aa17.54■□□□□ 0.4
DHFR-201ENST00000439211 TRIM28Q13263 835 aaKnown RBP17.54■□□□□ 0.4
DHFR-201ENST00000439211 TTC38Q5R3I4 469 aa17.54■□□□□ 0.4
DHFR-201ENST00000439211 ACRBPQ8NEB7 543 aa17.54■□□□□ 0.4
DHFR-201ENST00000439211 ENOX1Q8TC92 643 aaKnown RBP17.54■□□□□ 0.4
DHFR-201ENST00000439211 TNS3Q68CZ2 1445 aa17.54■□□□□ 0.4
DHFR-201ENST00000439211 SETSIPP0DME0 302 aa17.54■□□□□ 0.4
DHFR-201ENST00000439211 CASP14P31944 242 aa17.54■□□□□ 0.4
DHFR-201ENST00000439211 PLCD1P51178 756 aa17.54■□□□□ 0.4
DHFR-201ENST00000439211 SMTNP53814 917 aa17.54■□□□□ 0.4
DHFR-201ENST00000439211 CFAP58Q5T655 872 aa17.54■□□□□ 0.4
DHFR-201ENST00000439211 HIBCHQ6NVY1 386 aaPredicted RBP17.54■□□□□ 0.4
DHFR-201ENST00000439211 ZNF483Q8TF39 744 aaPredicted RBP17.54■□□□□ 0.4
DHFR-201ENST00000439211 HPSEQ9Y251 543 aa17.54■□□□□ 0.4
DHFR-201ENST00000439211 SMIM24O75264 130 aa17.53■□□□□ 0.4
DHFR-201ENST00000439211 UBXN1Q04323 297 aa17.53■□□□□ 0.4
DHFR-201ENST00000439211 SGMS1Q86VZ5 419 aa17.53■□□□□ 0.4
DHFR-201ENST00000439211 TCP11Q8WWU5 503 aa17.53■□□□□ 0.4
DHFR-201ENST00000439211 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.53■□□□□ 0.4
DHFR-201ENST00000439211 HAUS2Q9NVX0 235 aa17.53■□□□□ 0.4
DHFR-201ENST00000439211 DDX20Q9UHI6 824 aaKnown RBP17.53■□□□□ 0.4
DHFR-201ENST00000439211 KDM3BQ7LBC6 1761 aa17.53■□□□□ 0.4
DHFR-201ENST00000439211 NEFHP12036 1026 aa17.53■□□□□ 0.4
DHFR-201ENST00000439211 ITFG2Q969R8 447 aa17.53■□□□□ 0.4
DHFR-201ENST00000439211 CCDC47Q96A33 483 aaKnown RBP17.53■□□□□ 0.4
DHFR-201ENST00000439211 MAP3K14Q99558 947 aa17.53■□□□□ 0.4
DHFR-201ENST00000439211 TMX4Q9H1E5 349 aaPredicted RBP17.53■□□□□ 0.4
DHFR-201ENST00000439211 WDR19Q8NEZ3 1342 aa17.53■□□□□ 0.4
DHFR-201ENST00000439211 CCDC194A0A1B0GVG4 234 aa17.53■□□□□ 0.4
DHFR-201ENST00000439211 EME2A4GXA9 379 aaPredicted RBP17.53■□□□□ 0.4
DHFR-201ENST00000439211 MARCH6O60337 910 aa17.53■□□□□ 0.4
DHFR-201ENST00000439211 PTGDRQ13258 359 aa17.53■□□□□ 0.4
DHFR-201ENST00000439211 USP17L12C9JPN9 530 aa17.53■□□□□ 0.4
DHFR-201ENST00000439211 USP17L21D6R901 530 aa17.53■□□□□ 0.4
DHFR-201ENST00000439211 UBA7P41226 1012 aa17.53■□□□□ 0.4
DHFR-201ENST00000439211 STAT6P42226 847 aa17.53■□□□□ 0.4
DHFR-201ENST00000439211 CPLX4Q7Z7G2 160 aa17.53■□□□□ 0.4
DHFR-201ENST00000439211 SUDS3Q9H7L9 328 aaPredicted RBP17.53■□□□□ 0.4
DHFR-201ENST00000439211 ZNHIT6Q9NWK9 470 aaKnown RBP17.53■□□□□ 0.4
DHFR-201ENST00000439211 SRPRBQ9Y5M8 271 aaKnown RBP17.53■□□□□ 0.4
DHFR-201ENST00000439211 BAZ2BQ9UIF8 2168 aaKnown RBP17.52■□□□□ 0.4
DHFR-201ENST00000439211 KRT9P35527 623 aa17.52■□□□□ 0.4
DHFR-201ENST00000439211 MRPS25P82663 173 aaKnown RBP17.52■□□□□ 0.4
DHFR-201ENST00000439211 NTRK3Q16288 839 aa17.52■□□□□ 0.4
DHFR-201ENST00000439211 CYB5D1Q6P9G0 228 aa17.52■□□□□ 0.4
DHFR-201ENST00000439211 SPAG5Q96R06 1193 aa17.52■□□□□ 0.4
DHFR-201ENST00000439211 RTL9Q8NET4 1388 aa17.52■□□□□ 0.4
DHFR-201ENST00000439211 DYNLL1P63167 89 aaKnown RBP17.52■□□□□ 0.4
DHFR-201ENST00000439211 CNGA4Q8IV77 575 aa17.52■□□□□ 0.4
DHFR-201ENST00000439211 CCDC24Q8N4L8 307 aa17.52■□□□□ 0.4
DHFR-201ENST00000439211 SH2D3CQ8N5H7 860 aa17.52■□□□□ 0.4
DHFR-201ENST00000439211 FBXO2Q9UK22 296 aaPredicted RBP17.52■□□□□ 0.4
DHFR-201ENST00000439211 SAR1BQ9Y6B6 198 aa17.52■□□□□ 0.4
DHFR-201ENST00000439211 ZNF335Q9H4Z2 1342 aaPredicted RBP17.52■□□□□ 0.39
DHFR-201ENST00000439211 FSBPO95073 299 aa17.52■□□□□ 0.39
DHFR-201ENST00000439211 SPATA1Q5VX52 437 aa17.52■□□□□ 0.39
DHFR-201ENST00000439211 FBXL16Q8N461 479 aa17.52■□□□□ 0.39
DHFR-201ENST00000439211 TRIM47Q96LD4 638 aa17.52■□□□□ 0.39
DHFR-201ENST00000439211 MKNK2Q9HBH9 465 aa17.52■□□□□ 0.39
DHFR-201ENST00000439211 ADGRG1Q9Y653 693 aa17.52■□□□□ 0.39
DHFR-201ENST00000439211 PLEKHA8P1O95397 391 aa17.51■□□□□ 0.39
DHFR-201ENST00000439211 CDC25CP30307 473 aa17.51■□□□□ 0.39
DHFR-201ENST00000439211 TOB1P50616 345 aaPredicted RBP17.51■□□□□ 0.39
DHFR-201ENST00000439211 GPIHBP1Q8IV16 184 aa17.51■□□□□ 0.39
DHFR-201ENST00000439211 EHBP1Q8NDI1 1231 aa17.51■□□□□ 0.39
DHFR-201ENST00000439211 LMBR1Q8WVP7 490 aa17.51■□□□□ 0.39
DHFR-201ENST00000439211 STX8Q9UNK0 236 aa17.51■□□□□ 0.39
DHFR-201ENST00000439211 MYO1BO43795 1136 aa17.51■□□□□ 0.39
DHFR-201ENST00000439211 GUCY1A3Q02108 690 aa17.51■□□□□ 0.39
DHFR-201ENST00000439211 CHRNDQ07001 517 aa17.51■□□□□ 0.39
DHFR-201ENST00000439211 SUSD4Q5VX71 490 aa17.51■□□□□ 0.39
DHFR-201ENST00000439211 TUBGCP6Q96RT7 1819 aa17.51■□□□□ 0.39
DHFR-201ENST00000439211 RAD21O60216 631 aa17.51■□□□□ 0.39
DHFR-201ENST00000439211 THEMIS2Q5TEJ8 643 aa17.51■□□□□ 0.39
DHFR-201ENST00000439211 FAM217BQ9NTX9 383 aaPredicted RBP17.51■□□□□ 0.39
DHFR-201ENST00000439211 AATFQ9NY61 560 aaKnown RBP eCLIP17.51■□□□□ 0.39
DHFR-201ENST00000439211 SEC24CP53992 1094 aa17.5■□□□□ 0.39
DHFR-201ENST00000439211 PDCD2Q16342 344 aaPredicted RBP17.5■□□□□ 0.39
DHFR-201ENST00000439211 TC2NQ8N9U0 490 aa17.5■□□□□ 0.39
DHFR-201ENST00000439211 TRIML1Q8N9V2 468 aa17.5■□□□□ 0.39
DHFR-201ENST00000439211 NSMCE1Q8WV22 266 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms