RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 MAMDC4Q6UXC1 1216 aa21.79■■□□□ 1.08
AC004540.1-201ENST00000439120 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.79■■□□□ 1.08
AC004540.1-201ENST00000439120 ZNF589Q86UQ0 364 aaPredicted RBP21.79■■□□□ 1.08
AC004540.1-201ENST00000439120 SZT2Q5T011 3432 aa21.78■■□□□ 1.08
AC004540.1-201ENST00000439120 PLA2G6O60733 806 aa21.78■■□□□ 1.08
AC004540.1-201ENST00000439120 IGHDP01880 384 aa21.78■■□□□ 1.08
AC004540.1-201ENST00000439120 HAND2P61296 217 aa21.78■■□□□ 1.08
AC004540.1-201ENST00000439120 TRIM60Q495X7 471 aa21.78■■□□□ 1.08
AC004540.1-201ENST00000439120 CCDC174Q6PII3 467 aa21.78■■□□□ 1.08
AC004540.1-201ENST00000439120 AGBL1Q96MI9 1066 aa21.78■■□□□ 1.08
AC004540.1-201ENST00000439120 RNF146Q9NTX7 359 aa21.78■■□□□ 1.08
AC004540.1-201ENST00000439120 PHF24Q9UPV7 400 aa21.78■■□□□ 1.08
AC004540.1-201ENST00000439120 POTEB2H3BUK9 544 aa21.77■■□□□ 1.08
AC004540.1-201ENST00000439120 SNAI1O95863 264 aaPredicted RBP21.77■■□□□ 1.08
AC004540.1-201ENST00000439120 FGRP09769 529 aa21.77■■□□□ 1.08
AC004540.1-201ENST00000439120 ALAS1P13196 640 aa21.77■■□□□ 1.08
AC004540.1-201ENST00000439120 SDSP20132 328 aa21.77■■□□□ 1.08
AC004540.1-201ENST00000439120 TKFCQ3LXA3 575 aa21.77■■□□□ 1.08
AC004540.1-201ENST00000439120 LRIT3Q3SXY7 679 aa21.77■■□□□ 1.08
AC004540.1-201ENST00000439120 PLEKHM2Q8IWE5 1019 aa21.77■■□□□ 1.08
AC004540.1-201ENST00000439120 DCAF4Q8WV16 495 aa21.77■■□□□ 1.08
AC004540.1-201ENST00000439120 LENG1Q96BZ8 264 aaPredicted RBP21.77■■□□□ 1.08
AC004540.1-201ENST00000439120 DIAPH3Q9NSV4 1193 aa21.77■■□□□ 1.08
AC004540.1-201ENST00000439120 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.77■■□□□ 1.08
AC004540.1-201ENST00000439120 TACC3Q9Y6A5 838 aa21.77■■□□□ 1.08
AC004540.1-201ENST00000439120 TOP1P11387 765 aaKnown RBP21.76■■□□□ 1.07
AC004540.1-201ENST00000439120 ACVR2BQ13705 512 aa21.76■■□□□ 1.07
AC004540.1-201ENST00000439120 SNX17Q15036 470 aa21.76■■□□□ 1.07
AC004540.1-201ENST00000439120 MFSD6Q6ZSS7 791 aa21.76■■□□□ 1.07
AC004540.1-201ENST00000439120 TRERF1Q96PN7 1200 aa21.76■■□□□ 1.07
AC004540.1-201ENST00000439120 ABHD16BQ9H3Z7 469 aa21.76■■□□□ 1.07
AC004540.1-201ENST00000439120 OSBPL3Q9H4L5 887 aa21.76■■□□□ 1.07
AC004540.1-201ENST00000439120 RNF41Q9H4P4 317 aaPredicted RBP21.76■■□□□ 1.07
AC004540.1-201ENST00000439120 PRR12Q9ULL5 1215 aa21.76■■□□□ 1.07
AC004540.1-201ENST00000439120 PCP11498 1178 aaKnown RBP21.75■■□□□ 1.07
AC004540.1-201ENST00000439120 SNAP25P60880 206 aa21.75■■□□□ 1.07
AC004540.1-201ENST00000439120 ARMCX2Q7L311 632 aa21.75■■□□□ 1.07
AC004540.1-201ENST00000439120 RASGRP2Q7LDG7 609 aa21.75■■□□□ 1.07
AC004540.1-201ENST00000439120 SPC25Q9HBM1 224 aa21.75■■□□□ 1.07
AC004540.1-201ENST00000439120 ZNF536O15090 1300 aa21.75■■□□□ 1.07
AC004540.1-201ENST00000439120 SYNRGQ9UMZ2 1314 aa21.75■■□□□ 1.07
AC004540.1-201ENST00000439120 A0A1W2PQ45 241 aaPredicted RBP21.74■■□□□ 1.07
AC004540.1-201ENST00000439120 A0A1W2PQY0 241 aa21.74■■□□□ 1.07
AC004540.1-201ENST00000439120 HIP1O00291 1037 aa21.74■■□□□ 1.07
AC004540.1-201ENST00000439120 DUSP11O75319 330 aaKnown RBP21.74■■□□□ 1.07
AC004540.1-201ENST00000439120 NOVP48745 357 aa21.74■■□□□ 1.07
AC004540.1-201ENST00000439120 CNTN2Q02246 1040 aa21.74■■□□□ 1.07
AC004540.1-201ENST00000439120 AKNAD1Q5T1N1 836 aa21.74■■□□□ 1.07
AC004540.1-201ENST00000439120 C1orf53Q5VUE5 145 aa21.74■■□□□ 1.07
AC004540.1-201ENST00000439120 CWC27Q6UX04 472 aaKnown RBP21.74■■□□□ 1.07
AC004540.1-201ENST00000439120 CCDC144CPQ8IYA2 1237 aa21.74■■□□□ 1.07
AC004540.1-201ENST00000439120 NUP133Q8WUM0 1156 aa21.74■■□□□ 1.07
AC004540.1-201ENST00000439120 TMEM47Q9BQJ4 181 aa21.74■■□□□ 1.07
AC004540.1-201ENST00000439120 TSEN34Q9BSV6 310 aaKnown RBP21.74■■□□□ 1.07
AC004540.1-201ENST00000439120 A1CFQ9NQ94 594 aaKnown RBP21.74■■□□□ 1.07
AC004540.1-201ENST00000439120 TCP11L1Q9NUJ3 509 aa21.74■■□□□ 1.07
AC004540.1-201ENST00000439120 CCPG1Q9ULG6 757 aa21.74■■□□□ 1.07
AC004540.1-201ENST00000439120 ZNF213O14771 459 aa21.73■■□□□ 1.07
AC004540.1-201ENST00000439120 ADAMTS4O75173 837 aa21.73■■□□□ 1.07
AC004540.1-201ENST00000439120 GPR153Q6NV75 609 aa21.73■■□□□ 1.07
AC004540.1-201ENST00000439120 STARD7Q9NQZ5 370 aa21.73■■□□□ 1.07
AC004540.1-201ENST00000439120 MCM3APO60318 1980 aa21.73■■□□□ 1.07
AC004540.1-201ENST00000439120 LTBP2Q14767 1821 aa21.73■■□□□ 1.07
AC004540.1-201ENST00000439120 LAMA3Q16787 3333 aa21.72■■□□□ 1.07
AC004540.1-201ENST00000439120 MOXD2PA6NHM9 499 aa21.72■■□□□ 1.07
AC004540.1-201ENST00000439120 ASB14A6NK59 587 aa21.72■■□□□ 1.07
AC004540.1-201ENST00000439120 C6orf222P0C671 652 aaPredicted RBP21.72■■□□□ 1.07
AC004540.1-201ENST00000439120 ACLYP53396 1101 aa21.72■■□□□ 1.07
AC004540.1-201ENST00000439120 TLE2Q04725 743 aa21.72■■□□□ 1.07
AC004540.1-201ENST00000439120 CCDC144BQ3MJ40 725 aa21.72■■□□□ 1.07
AC004540.1-201ENST00000439120 FAM133AQ8N9E0 248 aa21.72■■□□□ 1.07
AC004540.1-201ENST00000439120 ESR2Q92731 530 aa21.72■■□□□ 1.07
AC004540.1-201ENST00000439120 FGD4Q96M96 766 aa21.72■■□□□ 1.07
AC004540.1-201ENST00000439120 GPCPD1Q9NPB8 672 aa21.72■■□□□ 1.07
AC004540.1-201ENST00000439120 PDLIM7Q9NR12 457 aa21.72■■□□□ 1.07
AC004540.1-201ENST00000439120 FRMPD2Q68DX3 1309 aaPredicted RBP21.72■■□□□ 1.07
AC004540.1-201ENST00000439120 PQBP1O60828 265 aaKnown RBP21.71■■□□□ 1.07
AC004540.1-201ENST00000439120 ICAM1P05362 532 aa21.71■■□□□ 1.07
AC004540.1-201ENST00000439120 SLC16A2P36021 539 aa21.71■■□□□ 1.07
AC004540.1-201ENST00000439120 SYDE2Q5VT97 1194 aa21.71■■□□□ 1.07
AC004540.1-201ENST00000439120 TTBK2Q6IQ55 1244 aa21.71■■□□□ 1.07
AC004540.1-201ENST00000439120 NSMFQ6X4W1 530 aa21.71■■□□□ 1.07
AC004540.1-201ENST00000439120 NOL8Q76FK4 1167 aaKnown RBP21.71■■□□□ 1.07
AC004540.1-201ENST00000439120 TBC1D10CQ8IV04 446 aa21.71■■□□□ 1.07
AC004540.1-201ENST00000439120 TTC14Q96N46 770 aa21.71■■□□□ 1.07
AC004540.1-201ENST00000439120 SUPT16HQ9Y5B9 1047 aaKnown RBP21.71■■□□□ 1.07
AC004540.1-201ENST00000439120 CLTBP09497 229 aa21.7■■□□□ 1.06
AC004540.1-201ENST00000439120 KCNA10Q16322 511 aa21.7■■□□□ 1.06
AC004540.1-201ENST00000439120 MUM1L1Q5H9M0 696 aa21.7■■□□□ 1.06
AC004540.1-201ENST00000439120 DEFB123Q8N688 67 aa21.7■■□□□ 1.06
AC004540.1-201ENST00000439120 PCSK9Q8NBP7 692 aaKnown RBP21.7■■□□□ 1.06
AC004540.1-201ENST00000439120 BADQ92934 168 aa21.7■■□□□ 1.06
AC004540.1-201ENST00000439120 GLT1D1Q96MS3 346 aa21.7■■□□□ 1.06
AC004540.1-201ENST00000439120 RANBP17Q9H2T7 1088 aaKnown RBP21.7■■□□□ 1.06
AC004540.1-201ENST00000439120 LAMA4Q16363 1823 aa21.69■■□□□ 1.06
AC004540.1-201ENST00000439120 BTNL9Q6UXG8 535 aa21.69■■□□□ 1.06
AC004540.1-201ENST00000439120 KLHDC9Q8NEP7 349 aa21.69■■□□□ 1.06
AC004540.1-201ENST00000439120 VTI1AQ96AJ9 217 aa21.69■■□□□ 1.06
AC004540.1-201ENST00000439120 CYP39A1Q9NYL5 469 aa21.69■■□□□ 1.06
AC004540.1-201ENST00000439120 SOWAHBA6NEL2 793 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms