RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 RAD21O60216 631 aa17.08■□□□□ 0.33
LINC00163-202ENST00000439088 MAP3K10Q02779 954 aa17.08■□□□□ 0.33
LINC00163-202ENST00000439088 PNOCQ13519 176 aa17.08■□□□□ 0.33
LINC00163-202ENST00000439088 IL17AQ16552 155 aa17.08■□□□□ 0.33
LINC00163-202ENST00000439088 DPF2Q92785 391 aa17.08■□□□□ 0.33
LINC00163-202ENST00000439088 BPIFA3Q9BQP9 254 aa17.08■□□□□ 0.33
LINC00163-202ENST00000439088 A0A087WWV3 80 aa17.08■□□□□ 0.32
LINC00163-202ENST00000439088 GOLGA6L19H0YKK7 550 aa17.08■□□□□ 0.32
LINC00163-202ENST00000439088 ACTN4O43707 911 aaKnown RBP17.08■□□□□ 0.32
LINC00163-202ENST00000439088 PPP1R11O60927 126 aaPredicted RBP17.08■□□□□ 0.32
LINC00163-202ENST00000439088 NDUFB10O96000 172 aa17.08■□□□□ 0.32
LINC00163-202ENST00000439088 LONP1P36776 959 aaKnown RBP17.08■□□□□ 0.32
LINC00163-202ENST00000439088 TNNI2P48788 182 aa17.08■□□□□ 0.32
LINC00163-202ENST00000439088 PLCB2Q00722 1185 aa17.08■□□□□ 0.32
LINC00163-202ENST00000439088 CCDC34Q96HJ3 373 aa17.08■□□□□ 0.32
LINC00163-202ENST00000439088 RIC8AQ9NPQ8 531 aa17.08■□□□□ 0.32
LINC00163-202ENST00000439088 BIN2Q9UBW5 565 aaPredicted RBP17.08■□□□□ 0.32
LINC00163-202ENST00000439088 SHTN1A0MZ66 631 aa17.07■□□□□ 0.32
LINC00163-202ENST00000439088 PDILTQ8N807 584 aa17.07■□□□□ 0.32
LINC00163-202ENST00000439088 ARHGEF10LQ9HCE6 1279 aa17.07■□□□□ 0.32
LINC00163-202ENST00000439088 A0A1W2PRG0 241 aa17.06■□□□□ 0.32
LINC00163-202ENST00000439088 BIN1O00499 593 aa17.06■□□□□ 0.32
LINC00163-202ENST00000439088 PRPHP41219 470 aa17.06■□□□□ 0.32
LINC00163-202ENST00000439088 RASSF7Q02833 373 aa17.06■□□□□ 0.32
LINC00163-202ENST00000439088 ORC2Q13416 577 aaPredicted RBP17.06■□□□□ 0.32
LINC00163-202ENST00000439088 POSTNQ15063 836 aa17.06■□□□□ 0.32
LINC00163-202ENST00000439088 DPCR1Q3MIW9 517 aa17.06■□□□□ 0.32
LINC00163-202ENST00000439088 JAKMIP3Q5VZ66 844 aa17.06■□□□□ 0.32
LINC00163-202ENST00000439088 NEK8Q86SG6 692 aa17.06■□□□□ 0.32
LINC00163-202ENST00000439088 DHX40Q8IX18 779 aaKnown RBP17.06■□□□□ 0.32
LINC00163-202ENST00000439088 FAM43AQ8N2R8 423 aa17.06■□□□□ 0.32
LINC00163-202ENST00000439088 PYM1Q9BRP8 204 aaKnown RBP17.06■□□□□ 0.32
LINC00163-202ENST00000439088 CCDC39Q9UFE4 941 aa17.06■□□□□ 0.32
LINC00163-202ENST00000439088 PCDHA5Q9Y5H7 936 aa17.06■□□□□ 0.32
LINC00163-202ENST00000439088 BECN2A8MW95 431 aa17.06■□□□□ 0.32
LINC00163-202ENST00000439088 SLFN14P0C7P3 912 aa17.06■□□□□ 0.32
LINC00163-202ENST00000439088 BMP3P12645 472 aa17.06■□□□□ 0.32
LINC00163-202ENST00000439088 PRELPP51888 382 aa17.06■□□□□ 0.32
LINC00163-202ENST00000439088 MRPL12P52815 198 aaKnown RBP17.06■□□□□ 0.32
LINC00163-202ENST00000439088 DTHD1Q6ZMT9 781 aa17.06■□□□□ 0.32
LINC00163-202ENST00000439088 NLGN2Q8NFZ4 835 aa17.06■□□□□ 0.32
LINC00163-202ENST00000439088 TBCKQ8TEA7 893 aa17.06■□□□□ 0.32
LINC00163-202ENST00000439088 GLT8D2Q9H1C3 349 aa17.06■□□□□ 0.32
LINC00163-202ENST00000439088 ZBTB21Q9ULJ3 1066 aa17.06■□□□□ 0.32
LINC00163-202ENST00000439088 TMX2Q9Y320 296 aa17.06■□□□□ 0.32
LINC00163-202ENST00000439088 A0A087X0B3 334 aa17.05■□□□□ 0.32
LINC00163-202ENST00000439088 FOXN1O15353 648 aa17.05■□□□□ 0.32
LINC00163-202ENST00000439088 GMPSP49915 693 aaPredicted RBP17.05■□□□□ 0.32
LINC00163-202ENST00000439088 QRICH1Q2TAL8 776 aa17.05■□□□□ 0.32
LINC00163-202ENST00000439088 NT5DC1Q5TFE4 455 aa17.05■□□□□ 0.32
LINC00163-202ENST00000439088 BTNL9Q6UXG8 535 aa17.05■□□□□ 0.32
LINC00163-202ENST00000439088 CDAN1Q8IWY9 1227 aa17.05■□□□□ 0.32
LINC00163-202ENST00000439088 CUL5Q93034 780 aa17.05■□□□□ 0.32
LINC00163-202ENST00000439088 DHX58Q96C10 678 aa17.05■□□□□ 0.32
LINC00163-202ENST00000439088 TMEM260Q9NX78 707 aa17.05■□□□□ 0.32
LINC00163-202ENST00000439088 CAP2P40123 477 aa17.05■□□□□ 0.32
LINC00163-202ENST00000439088 SARSP49591 514 aaKnown RBP17.05■□□□□ 0.32
LINC00163-202ENST00000439088 TNFAIP1Q13829 316 aa17.05■□□□□ 0.32
LINC00163-202ENST00000439088 RASA3Q14644 834 aa17.05■□□□□ 0.32
LINC00163-202ENST00000439088 LETM2Q2VYF4 491 aa17.05■□□□□ 0.32
LINC00163-202ENST00000439088 MIGA2Q7L4E1 593 aa17.05■□□□□ 0.32
LINC00163-202ENST00000439088 TMEM60Q9H2L4 133 aa17.05■□□□□ 0.32
LINC00163-202ENST00000439088 ARFGEF1Q9Y6D6 1849 aa17.04■□□□□ 0.32
LINC00163-202ENST00000439088 ESPNB1AK53 854 aa17.04■□□□□ 0.32
LINC00163-202ENST00000439088 CCNT1O60563 726 aaKnown RBP17.04■□□□□ 0.32
LINC00163-202ENST00000439088 CLK2P49760 499 aaKnown RBP17.04■□□□□ 0.32
LINC00163-202ENST00000439088 CDC37Q16543 378 aaPredicted RBP17.04■□□□□ 0.32
LINC00163-202ENST00000439088 SH3RF1Q7Z6J0 888 aa17.04■□□□□ 0.32
LINC00163-202ENST00000439088 MICALL2Q8IY33 904 aa17.04■□□□□ 0.32
LINC00163-202ENST00000439088 PSTPIP2Q9H939 334 aa17.04■□□□□ 0.32
LINC00163-202ENST00000439088 CNOT7Q9UIV1 285 aaKnown RBP17.04■□□□□ 0.32
LINC00163-202ENST00000439088 TMEM232C9JQI7 657 aa17.03■□□□□ 0.32
LINC00163-202ENST00000439088 SYDE2Q5VT97 1194 aa17.03■□□□□ 0.32
LINC00163-202ENST00000439088 IQUBQ8NA54 791 aa17.03■□□□□ 0.32
LINC00163-202ENST00000439088 NUP88Q99567 741 aaPredicted RBP17.03■□□□□ 0.32
LINC00163-202ENST00000439088 GOPCQ9HD26 462 aa17.03■□□□□ 0.32
LINC00163-202ENST00000439088 PCDHA1Q9Y5I3 950 aa17.03■□□□□ 0.32
LINC00163-202ENST00000439088 GJA3Q9Y6H8 435 aa17.03■□□□□ 0.32
LINC00163-202ENST00000439088 EGFRP00533 1210 aa17.03■□□□□ 0.32
LINC00163-202ENST00000439088 PTMAP06454 111 aaKnown RBP17.03■□□□□ 0.32
LINC00163-202ENST00000439088 ECE1P42892 770 aa17.03■□□□□ 0.32
LINC00163-202ENST00000439088 ISM2Q6H9L7 571 aa17.03■□□□□ 0.32
LINC00163-202ENST00000439088 SARM1Q6SZW1 724 aa17.03■□□□□ 0.32
LINC00163-202ENST00000439088 AOPEPQ8N6M6 819 aa17.03■□□□□ 0.32
LINC00163-202ENST00000439088 SPATA20Q8TB22 786 aa17.03■□□□□ 0.32
LINC00163-202ENST00000439088 ACER1Q8TDN7 264 aa17.03■□□□□ 0.32
LINC00163-202ENST00000439088 SMARCE1Q969G3 411 aa17.03■□□□□ 0.32
LINC00163-202ENST00000439088 PAGE5Q96GU1 130 aa17.03■□□□□ 0.32
LINC00163-202ENST00000439088 SMTNL1A8MU46 457 aa17.02■□□□□ 0.32
LINC00163-202ENST00000439088 NEMFO60524 1076 aa17.02■□□□□ 0.32
LINC00163-202ENST00000439088 SMC2O95347 1197 aa17.02■□□□□ 0.32
LINC00163-202ENST00000439088 PRR29P0C7W0 189 aa17.02■□□□□ 0.32
LINC00163-202ENST00000439088 TXLNAP40222 546 aa17.02■□□□□ 0.32
LINC00163-202ENST00000439088 E2F4Q16254 413 aa17.02■□□□□ 0.32
LINC00163-202ENST00000439088 ZSCAN30Q86W11 494 aa17.02■□□□□ 0.32
LINC00163-202ENST00000439088 TRIML1Q8N9V2 468 aa17.02■□□□□ 0.32
LINC00163-202ENST00000439088 AMNQ9BXJ7 453 aa17.02■□□□□ 0.32
LINC00163-202ENST00000439088 OR52Z1P0C646 297 aa17.02■□□□□ 0.31
LINC00163-202ENST00000439088 SAMD7Q7Z3H4 446 aa17.02■□□□□ 0.31
LINC00163-202ENST00000439088 PLA2G4DQ86XP0 818 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms