RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 TSPY2A6NKD2 308 aa10.11□□□□□ -0.79
HERPUD2-206ENST00000438224 SLC3A2P08195 630 aaKnown RBP10.11□□□□□ -0.79
HERPUD2-206ENST00000438224 XRCC5P13010 732 aaKnown RBP10.11□□□□□ -0.79
HERPUD2-206ENST00000438224 CHMLP26374 656 aa10.11□□□□□ -0.79
HERPUD2-206ENST00000438224 SSTR3P32745 418 aaPredicted RBP10.11□□□□□ -0.79
HERPUD2-206ENST00000438224 GJA8P48165 433 aa10.11□□□□□ -0.79
HERPUD2-206ENST00000438224 UBXN2AP68543 259 aa10.11□□□□□ -0.79
HERPUD2-206ENST00000438224 CCNA1P78396 465 aa10.11□□□□□ -0.79
HERPUD2-206ENST00000438224 MDM2Q00987 491 aaPredicted RBP10.11□□□□□ -0.79
HERPUD2-206ENST00000438224 PLS1Q14651 629 aa10.11□□□□□ -0.79
HERPUD2-206ENST00000438224 RRP12Q5JTH9 1297 aaKnown RBP10.11□□□□□ -0.79
HERPUD2-206ENST00000438224 AKNAD1Q5T1N1 836 aa10.11□□□□□ -0.79
HERPUD2-206ENST00000438224 ASTLQ6HA08 431 aaPredicted RBP10.11□□□□□ -0.79
HERPUD2-206ENST00000438224 RCSD1Q6JBY9 416 aa10.11□□□□□ -0.79
HERPUD2-206ENST00000438224 MB21D1Q8N884 522 aa10.11□□□□□ -0.79
HERPUD2-206ENST00000438224 GMCL1P1Q8NEA9 526 aa10.11□□□□□ -0.79
HERPUD2-206ENST00000438224 SHCBP1Q8NEM2 672 aa10.11□□□□□ -0.79
HERPUD2-206ENST00000438224 U2AF1L4Q8WU68 220 aaKnown RBP10.11□□□□□ -0.79
HERPUD2-206ENST00000438224 STAG1Q8WVM7 1258 aa10.11□□□□□ -0.79
HERPUD2-206ENST00000438224 SLF1Q9BQI6 1058 aa10.11□□□□□ -0.79
HERPUD2-206ENST00000438224 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.11□□□□□ -0.79
HERPUD2-206ENST00000438224 DNAH12Q6ZR08 3092 aa10.1□□□□□ -0.79
HERPUD2-206ENST00000438224 LRRC37A2A6NM11 1700 aa10.1□□□□□ -0.79
HERPUD2-206ENST00000438224 TRIOBPQ9H2D6 2365 aa10.1□□□□□ -0.79
HERPUD2-206ENST00000438224 C2orf72A6NCS6 295 aa10.1□□□□□ -0.79
HERPUD2-206ENST00000438224 ATMINO43313 823 aaPredicted RBP10.1□□□□□ -0.79
HERPUD2-206ENST00000438224 COBLO75128 1261 aa10.1□□□□□ -0.79
HERPUD2-206ENST00000438224 HOXC6P09630 235 aa10.1□□□□□ -0.79
HERPUD2-206ENST00000438224 ADORA2AP29274 412 aa10.1□□□□□ -0.79
HERPUD2-206ENST00000438224 CCND3P30281 292 aaPredicted RBP10.1□□□□□ -0.79
HERPUD2-206ENST00000438224 RGS2P41220 211 aa10.1□□□□□ -0.79
HERPUD2-206ENST00000438224 PTH1RQ03431 593 aa10.1□□□□□ -0.79
HERPUD2-206ENST00000438224 CACNB2Q08289 660 aaPredicted RBP10.1□□□□□ -0.79
HERPUD2-206ENST00000438224 SLFN13Q68D06 897 aa10.1□□□□□ -0.79
HERPUD2-206ENST00000438224 RIOX2Q8IUF8 465 aa10.1□□□□□ -0.79
HERPUD2-206ENST00000438224 CCAR1Q8IX12 1150 aaKnown RBP10.1□□□□□ -0.79
HERPUD2-206ENST00000438224 DEFB118Q96PH6 123 aa10.1□□□□□ -0.79
HERPUD2-206ENST00000438224 DSCC1Q9BVC3 393 aa10.1□□□□□ -0.79
HERPUD2-206ENST00000438224 SYNPO2Q9UMS6 1093 aa10.1□□□□□ -0.79
HERPUD2-206ENST00000438224 STX8Q9UNK0 236 aa10.1□□□□□ -0.79
HERPUD2-206ENST00000438224 RIPK3Q9Y572 518 aa10.1□□□□□ -0.79
HERPUD2-206ENST00000438224 TAF6LQ9Y6J9 622 aa10.1□□□□□ -0.79
HERPUD2-206ENST00000438224 HIP1O00291 1037 aa10.09□□□□□ -0.79
HERPUD2-206ENST00000438224 SGPL1O95470 568 aa10.09□□□□□ -0.79
HERPUD2-206ENST00000438224 BMP3P12645 472 aa10.09□□□□□ -0.79
HERPUD2-206ENST00000438224 ZKSCAN1P17029 563 aaPredicted RBP10.09□□□□□ -0.79
HERPUD2-206ENST00000438224 TAL1P17542 331 aaPredicted RBP10.09□□□□□ -0.79
HERPUD2-206ENST00000438224 MCCP23508 829 aa10.09□□□□□ -0.79
HERPUD2-206ENST00000438224 PDE4CQ08493 712 aa10.09□□□□□ -0.79
HERPUD2-206ENST00000438224 KCTD1Q719H9 257 aa10.09□□□□□ -0.79
HERPUD2-206ENST00000438224 NCAPG2Q86XI2 1143 aa10.09□□□□□ -0.79
HERPUD2-206ENST00000438224 BANK1Q8NDB2 785 aa10.09□□□□□ -0.79
HERPUD2-206ENST00000438224 TRPV1Q8NER1 839 aa10.09□□□□□ -0.79
HERPUD2-206ENST00000438224 DIS3LQ8TF46 1054 aaKnown RBP10.09□□□□□ -0.79
HERPUD2-206ENST00000438224 TMEM47Q9BQJ4 181 aa10.09□□□□□ -0.79
HERPUD2-206ENST00000438224 TOMM22Q9NS69 142 aa10.09□□□□□ -0.79
HERPUD2-206ENST00000438224 IVNS1ABPQ9Y6Y0 642 aa10.09□□□□□ -0.79
HERPUD2-206ENST00000438224 RPTORQ8N122 1335 aa10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 RAD50Q92878 1312 aa10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 B4E1Z4 1266 aa10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 TMEM232C9JQI7 657 aa10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 SGSM2O43147 1006 aa10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 CYP2C19P33261 490 aa10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 STAT3P40763 770 aa10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 SNAP25P60880 206 aa10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 SNRNP48Q6IEG0 339 aaKnown RBP10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 TTBK2Q6IQ55 1244 aa10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 MFSD6Q6ZSS7 791 aa10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 CPXCR1Q8N123 301 aa10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 PRPF38AQ8NAV1 312 aaKnown RBP10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 KIFC2Q96AC6 838 aa10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 GMCL1Q96IK5 515 aa10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 ZKSCAN3Q9BRR0 538 aa10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 MROH8Q9H579 483 aa10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 SLC38A10Q9HBR0 1119 aa10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 CWC22Q9HCG8 908 aaKnown RBP10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 RAVER2Q9HCJ3 691 aaKnown RBP10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 HMX1Q9NP08 348 aaPredicted RBP10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 TCP11L1Q9NUJ3 509 aa10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 POLR3EQ9NVU0 708 aa10.08□□□□□ -0.8
HERPUD2-206ENST00000438224 ZNF536O15090 1300 aa10.07□□□□□ -0.8
HERPUD2-206ENST00000438224 ZNF213O14771 459 aa10.07□□□□□ -0.8
HERPUD2-206ENST00000438224 ATP2A1O14983 1001 aa10.07□□□□□ -0.8
HERPUD2-206ENST00000438224 STRNO43815 780 aa10.07□□□□□ -0.8
HERPUD2-206ENST00000438224 KDM4AO75164 1064 aa10.07□□□□□ -0.8
HERPUD2-206ENST00000438224 FARP2O94887 1054 aaPredicted RBP10.07□□□□□ -0.8
HERPUD2-206ENST00000438224 PGK2P07205 417 aa10.07□□□□□ -0.8
HERPUD2-206ENST00000438224 CYBAP13498 195 aa10.07□□□□□ -0.8
HERPUD2-206ENST00000438224 TIE1P35590 1138 aa10.07□□□□□ -0.8
HERPUD2-206ENST00000438224 CENPQQ7L2Z9 268 aaPredicted RBP10.07□□□□□ -0.8
HERPUD2-206ENST00000438224 FGD4Q96M96 766 aa10.07□□□□□ -0.8
HERPUD2-206ENST00000438224 TEX13BQ9BXU2 312 aa10.07□□□□□ -0.8
HERPUD2-206ENST00000438224 FEM1BQ9UK73 627 aa10.07□□□□□ -0.8
HERPUD2-206ENST00000438224 PLA2G6O60733 806 aa10.06□□□□□ -0.8
HERPUD2-206ENST00000438224 SLC25A27O95847 323 aa10.06□□□□□ -0.8
HERPUD2-206ENST00000438224 CYP21A2P08686 494 aa10.06□□□□□ -0.8
HERPUD2-206ENST00000438224 TOP1P11387 765 aaKnown RBP10.06□□□□□ -0.8
HERPUD2-206ENST00000438224 PCP11498 1178 aaKnown RBP10.06□□□□□ -0.8
HERPUD2-206ENST00000438224 FCER1AP12319 257 aa10.06□□□□□ -0.8
HERPUD2-206ENST00000438224 SLC16A2P36021 539 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms