RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 CPLX2Q6PUV4 134 aaKnown RBP19.45■□□□□ 0.7
CALD1-209ENST00000436461 REPS2Q8NFH8 660 aa19.45■□□□□ 0.7
CALD1-209ENST00000436461 MTMR8Q96EF0 704 aa19.45■□□□□ 0.7
CALD1-209ENST00000436461 CNMDO75829 334 aa19.44■□□□□ 0.7
CALD1-209ENST00000436461 SSRP1Q08945 709 aaKnown RBP19.44■□□□□ 0.7
CALD1-209ENST00000436461 PLS1Q14651 629 aa19.44■□□□□ 0.7
CALD1-209ENST00000436461 LBX2Q6XYB7 198 aa19.44■□□□□ 0.7
CALD1-209ENST00000436461 ANKRD13CQ8N6S4 541 aa19.44■□□□□ 0.7
CALD1-209ENST00000436461 RRP36Q96EU6 259 aaKnown RBP19.44■□□□□ 0.7
CALD1-209ENST00000436461 AGBL1Q96MI9 1066 aa19.44■□□□□ 0.7
CALD1-209ENST00000436461 AIFM3Q96NN9 605 aa19.44■□□□□ 0.7
CALD1-209ENST00000436461 RBPJLQ9UBG7 517 aa19.44■□□□□ 0.7
CALD1-209ENST00000436461 CPA4Q9UI42 421 aa19.44■□□□□ 0.7
CALD1-209ENST00000436461 ZNF536O15090 1300 aa19.44■□□□□ 0.7
CALD1-209ENST00000436461 MYPNQ86TC9 1320 aa19.44■□□□□ 0.7
CALD1-209ENST00000436461 ZBED4O75132 1171 aa19.43■□□□□ 0.7
CALD1-209ENST00000436461 ECM2O94769 699 aaPredicted RBP19.43■□□□□ 0.7
CALD1-209ENST00000436461 FMNL1O95466 1100 aaPredicted RBP19.43■□□□□ 0.7
CALD1-209ENST00000436461 FDPSP14324 419 aaKnown RBP19.43■□□□□ 0.7
CALD1-209ENST00000436461 SMARCA1P28370 1054 aa19.43■□□□□ 0.7
CALD1-209ENST00000436461 USH1GQ495M9 461 aa19.43■□□□□ 0.7
CALD1-209ENST00000436461 GPKOWQ92917 476 aaPredicted RBP eCLIP19.43■□□□□ 0.7
CALD1-209ENST00000436461 RNF26Q9BY78 433 aaPredicted RBP19.43■□□□□ 0.7
CALD1-209ENST00000436461 ZCCHC17Q9NP64 241 aaKnown RBP19.43■□□□□ 0.7
CALD1-209ENST00000436461 ZNF214Q9UL59 606 aaPredicted RBP19.43■□□□□ 0.7
CALD1-209ENST00000436461 CTDP1Q9Y5B0 961 aaPredicted RBP19.43■□□□□ 0.7
CALD1-209ENST00000436461 ZBTB5O15062 677 aa19.43■□□□□ 0.7
CALD1-209ENST00000436461 PRPF3O43395 683 aaKnown RBP19.43■□□□□ 0.7
CALD1-209ENST00000436461 TRPA1O75762 1119 aa19.43■□□□□ 0.7
CALD1-209ENST00000436461 CDKL5O76039 1030 aa19.43■□□□□ 0.7
CALD1-209ENST00000436461 TBC1D8O95759 1140 aa19.43■□□□□ 0.7
CALD1-209ENST00000436461 FOSBP53539 338 aa19.43■□□□□ 0.7
CALD1-209ENST00000436461 PKN1Q16512 942 aa19.43■□□□□ 0.7
CALD1-209ENST00000436461 Q3C1V9 767 aa19.43■□□□□ 0.7
CALD1-209ENST00000436461 COA7Q96BR5 231 aa19.43■□□□□ 0.7
CALD1-209ENST00000436461 RNF186Q9NXI6 227 aa19.43■□□□□ 0.7
CALD1-209ENST00000436461 ORC3Q9UBD5 711 aaPredicted RBP19.43■□□□□ 0.7
CALD1-209ENST00000436461 SEC63Q9UGP8 760 aaKnown RBP19.43■□□□□ 0.7
CALD1-209ENST00000436461 ADGRA2Q96PE1 1338 aa19.43■□□□□ 0.7
CALD1-209ENST00000436461 AKAP17AQ02040 695 aaKnown RBP19.42■□□□□ 0.7
CALD1-209ENST00000436461 REM2Q8IYK8 340 aaPredicted RBP19.42■□□□□ 0.7
CALD1-209ENST00000436461 TRIM22Q8IYM9 498 aa19.42■□□□□ 0.7
CALD1-209ENST00000436461 SMARCC2Q8TAQ2 1214 aa19.42■□□□□ 0.7
CALD1-209ENST00000436461 ZFYVE28Q9HCC9 887 aa19.42■□□□□ 0.7
CALD1-209ENST00000436461 GJB4Q9NTQ9 266 aa19.42■□□□□ 0.7
CALD1-209ENST00000436461 RIPK3Q9Y572 518 aa19.42■□□□□ 0.7
CALD1-209ENST00000436461 PNMA6FA0A0J9YX94 578 aa19.41■□□□□ 0.7
CALD1-209ENST00000436461 CA12O43570 354 aa19.41■□□□□ 0.7
CALD1-209ENST00000436461 BECN1Q14457 450 aa19.41■□□□□ 0.7
CALD1-209ENST00000436461 SNRNP48Q6IEG0 339 aaKnown RBP19.41■□□□□ 0.7
CALD1-209ENST00000436461 HEATR3Q7Z4Q2 680 aa19.41■□□□□ 0.7
CALD1-209ENST00000436461 LLPHQ9BRT6 129 aaKnown RBP19.41■□□□□ 0.7
CALD1-209ENST00000436461 HOMER2Q9NSB8 354 aa19.41■□□□□ 0.7
CALD1-209ENST00000436461 CCPG1Q9ULG6 757 aa19.41■□□□□ 0.7
CALD1-209ENST00000436461 TLR2O60603 784 aa19.4■□□□□ 0.7
CALD1-209ENST00000436461 ALDH1A1P00352 501 aa19.4■□□□□ 0.7
CALD1-209ENST00000436461 ERVK-9P63128 1117 aa19.4■□□□□ 0.7
CALD1-209ENST00000436461 ERVK-24P63145 666 aa19.4■□□□□ 0.7
CALD1-209ENST00000436461 WWC2Q6AWC2 1192 aa19.4■□□□□ 0.7
CALD1-209ENST00000436461 TYW1BQ6NUM6 668 aa19.4■□□□□ 0.7
CALD1-209ENST00000436461 FBXO11Q86XK2 927 aa19.4■□□□□ 0.7
CALD1-209ENST00000436461 SHISA4Q96DD7 197 aa19.4■□□□□ 0.7
CALD1-209ENST00000436461 SPATC1LQ9H0A9 340 aa19.4■□□□□ 0.7
CALD1-209ENST00000436461 TSKSQ9UJT2 592 aa19.4■□□□□ 0.7
CALD1-209ENST00000436461 ZSWIM8A7E2V4 1837 aa19.4■□□□□ 0.7
CALD1-209ENST00000436461 STK36Q9NRP7 1315 aa19.4■□□□□ 0.7
CALD1-209ENST00000436461 DEXIO95424 95 aa19.4■□□□□ 0.7
CALD1-209ENST00000436461 ICAM1P05362 532 aa19.4■□□□□ 0.7
CALD1-209ENST00000436461 HSP90AA1P07900 732 aaKnown RBP19.4■□□□□ 0.7
CALD1-209ENST00000436461 ALAS1P13196 640 aa19.4■□□□□ 0.7
CALD1-209ENST00000436461 SCG2P13521 617 aa19.4■□□□□ 0.7
CALD1-209ENST00000436461 GJB2P29033 226 aa19.4■□□□□ 0.7
CALD1-209ENST00000436461 GCLCP48506 637 aaPredicted RBP19.4■□□□□ 0.7
CALD1-209ENST00000436461 PFKFB3Q16875 520 aaPredicted RBP19.4■□□□□ 0.7
CALD1-209ENST00000436461 MB21D1Q8N884 522 aa19.4■□□□□ 0.7
CALD1-209ENST00000436461 SMC3Q9UQE7 1217 aa19.4■□□□□ 0.7
CALD1-209ENST00000436461 RABGAP1Q9Y3P9 1069 aa19.4■□□□□ 0.7
CALD1-209ENST00000436461 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.4■□□□□ 0.7
CALD1-209ENST00000436461 FDX1P10109 184 aa19.39■□□□□ 0.69
CALD1-209ENST00000436461 BCRP11274 1271 aa19.39■□□□□ 0.69
CALD1-209ENST00000436461 STAT3P40763 770 aa19.39■□□□□ 0.69
CALD1-209ENST00000436461 C17orf99Q6UX52 265 aa19.39■□□□□ 0.69
CALD1-209ENST00000436461 AMNQ9BXJ7 453 aa19.39■□□□□ 0.69
CALD1-209ENST00000436461 MOV10L1Q9BXT6 1211 aaKnown RBP19.39■□□□□ 0.69
CALD1-209ENST00000436461 TEX13BQ9BXU2 312 aa19.39■□□□□ 0.69
CALD1-209ENST00000436461 VPS54Q9P1Q0 977 aa19.39■□□□□ 0.69
CALD1-209ENST00000436461 PCDHA1Q9Y5I3 950 aa19.39■□□□□ 0.69
CALD1-209ENST00000436461 GPRC5AQ8NFJ5 357 aa19.38■□□□□ 0.69
CALD1-209ENST00000436461 ALG1Q9BT22 464 aa19.38■□□□□ 0.69
CALD1-209ENST00000436461 PORCNQ9H237 461 aa19.38■□□□□ 0.69
CALD1-209ENST00000436461 STXBP3O00186 592 aa19.37■□□□□ 0.69
CALD1-209ENST00000436461 FAM110CQ1W6H9 321 aa19.37■□□□□ 0.69
CALD1-209ENST00000436461 MUM1L1Q5H9M0 696 aa19.37■□□□□ 0.69
CALD1-209ENST00000436461 NCAPG2Q86XI2 1143 aa19.37■□□□□ 0.69
CALD1-209ENST00000436461 FAM184AQ8NB25 1140 aa19.37■□□□□ 0.69
CALD1-209ENST00000436461 GTF3C2Q8WUA4 911 aaPredicted RBP19.37■□□□□ 0.69
CALD1-209ENST00000436461 EFCC1Q9HA90 598 aa19.37■□□□□ 0.69
CALD1-209ENST00000436461 MORF4L1Q9UBU8 362 aa19.37■□□□□ 0.69
CALD1-209ENST00000436461 ATP2A1O14983 1001 aa19.36■□□□□ 0.69
CALD1-209ENST00000436461 OAZ1P54368 228 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms