RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 ANKRD39Q53RE8 183 aa6.86□□□□□ -1.31
PTPN4-205ENST00000433888 CRTC3Q6UUV7 619 aa6.86□□□□□ -1.31
PTPN4-205ENST00000433888 LDHDQ86WU2 507 aa6.86□□□□□ -1.31
PTPN4-205ENST00000433888 KIAA0825Q8IV33 1275 aa6.86□□□□□ -1.31
PTPN4-205ENST00000433888 IGDCC3Q8IVU1 814 aa6.86□□□□□ -1.31
PTPN4-205ENST00000433888 MZB1Q8WU39 189 aa6.86□□□□□ -1.31
PTPN4-205ENST00000433888 RELTQ969Z4 430 aa6.86□□□□□ -1.31
PTPN4-205ENST00000433888 JMJD8Q96S16 334 aa6.86□□□□□ -1.31
PTPN4-205ENST00000433888 SPON2Q9BUD6 331 aa6.86□□□□□ -1.31
PTPN4-205ENST00000433888 CDADC1Q9BWV3 514 aa6.86□□□□□ -1.31
PTPN4-205ENST00000433888 GSNP06396 782 aa6.85□□□□□ -1.31
PTPN4-205ENST00000433888 PPFIBP1Q86W92 1011 aa6.85□□□□□ -1.31
PTPN4-205ENST00000433888 TAB3Q8N5C8 712 aaPredicted RBP6.85□□□□□ -1.31
PTPN4-205ENST00000433888 TMEM87AQ8NBN3 555 aa6.85□□□□□ -1.31
PTPN4-205ENST00000433888 DHRS1Q96LJ7 313 aa6.85□□□□□ -1.31
PTPN4-205ENST00000433888 SLC12A9Q9BXP2 914 aa6.85□□□□□ -1.31
PTPN4-205ENST00000433888 SRRTQ9BXP5 876 aaKnown RBP6.85□□□□□ -1.31
PTPN4-205ENST00000433888 XYLT2Q9H1B5 865 aa6.85□□□□□ -1.31
PTPN4-205ENST00000433888 PCDHA5Q9Y5H7 936 aa6.85□□□□□ -1.31
PTPN4-205ENST00000433888 TAF6LQ9Y6J9 622 aa6.85□□□□□ -1.31
PTPN4-205ENST00000433888 IRS2Q9Y4H2 1338 aa6.84□□□□□ -1.31
PTPN4-205ENST00000433888 ARL4AP40617 200 aa6.84□□□□□ -1.31
PTPN4-205ENST00000433888 AFF3P51826 1226 aaKnown RBP6.84□□□□□ -1.31
PTPN4-205ENST00000433888 PMS1P54277 932 aaKnown RBP6.84□□□□□ -1.31
PTPN4-205ENST00000433888 CYP4F8P98187 520 aa6.84□□□□□ -1.31
PTPN4-205ENST00000433888 MVKQ03426 396 aa6.84□□□□□ -1.31
PTPN4-205ENST00000433888 OLFML2BQ68BL8 750 aa6.84□□□□□ -1.31
PTPN4-205ENST00000433888 FAM129CQ86XR2 697 aa6.84□□□□□ -1.31
PTPN4-205ENST00000433888 ZNF16P17020 682 aaPredicted RBP6.83□□□□□ -1.32
PTPN4-205ENST00000433888 RBBP8NLQ8NC74 664 aaPredicted RBP6.83□□□□□ -1.32
PTPN4-205ENST00000433888 NUP43Q8NFH3 380 aa6.83□□□□□ -1.32
PTPN4-205ENST00000433888 KRTAP4-5Q9BYR2 181 aa6.83□□□□□ -1.32
PTPN4-205ENST00000433888 IMPACTQ9P2X3 320 aa6.83□□□□□ -1.32
PTPN4-205ENST00000433888 FAM86C2PA6NEL3 165 aa6.82□□□□□ -1.32
PTPN4-205ENST00000433888 FOXD2O60548 495 aaPredicted RBP6.82□□□□□ -1.32
PTPN4-205ENST00000433888 MSL3P1P0C860 447 aa6.82□□□□□ -1.32
PTPN4-205ENST00000433888 IMPDH2P12268 514 aa6.82□□□□□ -1.32
PTPN4-205ENST00000433888 RAB3GAP1Q15042 981 aa6.82□□□□□ -1.32
PTPN4-205ENST00000433888 AXDND1Q5T1B0 1012 aaPredicted RBP6.82□□□□□ -1.32
PTPN4-205ENST00000433888 RPTNQ6XPR3 784 aa6.82□□□□□ -1.32
PTPN4-205ENST00000433888 CCDC144CPQ8IYA2 1237 aa6.82□□□□□ -1.32
PTPN4-205ENST00000433888 OTOL1A6NHN0 477 aaPredicted RBP6.81□□□□□ -1.32
PTPN4-205ENST00000433888 NUDT19A8MXV4 375 aa6.81□□□□□ -1.32
PTPN4-205ENST00000433888 H0Y8X5 98 aa6.81□□□□□ -1.32
PTPN4-205ENST00000433888 FGF10O15520 208 aaPredicted RBP6.81□□□□□ -1.32
PTPN4-205ENST00000433888 GSTM1P09488 218 aa6.81□□□□□ -1.32
PTPN4-205ENST00000433888 IGFBP6P24592 240 aaPredicted RBP6.81□□□□□ -1.32
PTPN4-205ENST00000433888 ZNF445P59923 1031 aa6.81□□□□□ -1.32
PTPN4-205ENST00000433888 TMEM62Q0P6H9 643 aa6.81□□□□□ -1.32
PTPN4-205ENST00000433888 ZYXQ15942 572 aaKnown RBP6.81□□□□□ -1.32
PTPN4-205ENST00000433888 VMACQ2NL98 169 aa6.81□□□□□ -1.32
PTPN4-205ENST00000433888 TDRD10Q5VZ19 366 aaKnown RBP6.81□□□□□ -1.32
PTPN4-205ENST00000433888 DCAF15Q66K64 600 aa6.81□□□□□ -1.32
PTPN4-205ENST00000433888 CNKSR3Q6P9H4 555 aa6.81□□□□□ -1.32
PTPN4-205ENST00000433888 TMC6Q7Z403 805 aa6.81□□□□□ -1.32
PTPN4-205ENST00000433888 SMARCC1Q92922 1105 aaPredicted RBP6.81□□□□□ -1.32
PTPN4-205ENST00000433888 TM9SF2Q99805 663 aa6.81□□□□□ -1.32
PTPN4-205ENST00000433888 DSCC1Q9BVC3 393 aa6.81□□□□□ -1.32
PTPN4-205ENST00000433888 BACH2Q9BYV9 841 aa6.81□□□□□ -1.32
PTPN4-205ENST00000433888 GP6Q9HCN6 339 aa6.81□□□□□ -1.32
PTPN4-205ENST00000433888 RTEL1Q9NZ71 1219 aa6.81□□□□□ -1.32
PTPN4-205ENST00000433888 ZNF76P36508 570 aa6.8□□□□□ -1.32
PTPN4-205ENST00000433888 FANCCQ00597 558 aa6.8□□□□□ -1.32
PTPN4-205ENST00000433888 HLA-DQA1Q5Y7H0 255 aa6.8□□□□□ -1.32
PTPN4-205ENST00000433888 UNC5AQ6ZN44 842 aa6.8□□□□□ -1.32
PTPN4-205ENST00000433888 RUFY4Q6ZNE9 571 aa6.8□□□□□ -1.32
PTPN4-205ENST00000433888 USP48Q86UV5 1035 aa6.8□□□□□ -1.32
PTPN4-205ENST00000433888 TP53I13Q8NBR0 393 aaPredicted RBP6.8□□□□□ -1.32
PTPN4-205ENST00000433888 CD247P20963 164 aa6.79□□□□□ -1.32
PTPN4-205ENST00000433888 MAPKAPK2P49137 400 aa6.79□□□□□ -1.32
PTPN4-205ENST00000433888 NCKAP1LP55160 1127 aa6.79□□□□□ -1.32
PTPN4-205ENST00000433888 RACK1P63244 317 aaKnown RBP6.79□□□□□ -1.32
PTPN4-205ENST00000433888 NR1I3Q14994 352 aa6.79□□□□□ -1.32
PTPN4-205ENST00000433888 PLEKHN1Q494U1 663 aaPredicted RBP6.79□□□□□ -1.32
PTPN4-205ENST00000433888 ZNF394Q53GI3 561 aa6.79□□□□□ -1.32
PTPN4-205ENST00000433888 BRF1Q92994 677 aa6.79□□□□□ -1.32
PTPN4-205ENST00000433888 FCRL3Q96P31 734 aaPredicted RBP6.79□□□□□ -1.32
PTPN4-205ENST00000433888 METTL5Q9NRN9 209 aaKnown RBP6.79□□□□□ -1.32
PTPN4-205ENST00000433888 ZNF451Q9Y4E5 1061 aa6.79□□□□□ -1.32
PTPN4-205ENST00000433888 FHOD1Q9Y613 1164 aa6.79□□□□□ -1.32
PTPN4-205ENST00000433888 BUB1BO60566 1050 aaPredicted RBP6.78□□□□□ -1.32
PTPN4-205ENST00000433888 FBLN1P23142 703 aa6.78□□□□□ -1.32
PTPN4-205ENST00000433888 CAP1Q01518 475 aa6.78□□□□□ -1.32
PTPN4-205ENST00000433888 NFIXQ14938 502 aa6.78□□□□□ -1.32
PTPN4-205ENST00000433888 LINC01356Q8N9X3 169 aa6.78□□□□□ -1.32
PTPN4-205ENST00000433888 CXorf38Q8TB03 319 aa6.78□□□□□ -1.32
PTPN4-205ENST00000433888 ZNF214Q9UL59 606 aaPredicted RBP6.78□□□□□ -1.32
PTPN4-205ENST00000433888 PCDHGB7Q9Y5F8 929 aa6.78□□□□□ -1.32
PTPN4-205ENST00000433888 LTBP3Q9NS15 1303 aa6.77□□□□□ -1.32
PTPN4-205ENST00000433888 SRGAP3O43295 1099 aa6.77□□□□□ -1.33
PTPN4-205ENST00000433888 SASH1O94885 1247 aa6.77□□□□□ -1.33
PTPN4-205ENST00000433888 TP53P04637 393 aaPredicted RBP6.77□□□□□ -1.33
PTPN4-205ENST00000433888 DBHP09172 617 aa6.77□□□□□ -1.33
PTPN4-205ENST00000433888 SYN1P17600 705 aa6.77□□□□□ -1.33
PTPN4-205ENST00000433888 GUCY2CP25092 1073 aa6.77□□□□□ -1.33
PTPN4-205ENST00000433888 NOP2P46087 812 aaKnown RBP6.77□□□□□ -1.33
PTPN4-205ENST00000433888 CWF19L1Q69YN2 538 aaKnown RBP6.77□□□□□ -1.33
PTPN4-205ENST00000433888 ZC3H14Q6PJT7 736 aaKnown RBP6.77□□□□□ -1.33
PTPN4-205ENST00000433888 FIBCD1Q8N539 461 aa6.77□□□□□ -1.33
PTPN4-205ENST00000433888 NLGN2Q8NFZ4 835 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms