RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 ADGRF4Q8IZF3 695 aa16.75■□□□□ 0.27
CSTF3-202ENST00000431742 SPZ1Q9BXG8 430 aa16.75■□□□□ 0.27
CSTF3-202ENST00000431742 RIOX1Q9H6W3 641 aa16.75■□□□□ 0.27
CSTF3-202ENST00000431742 JMJD4Q9H9V9 463 aa16.75■□□□□ 0.27
CSTF3-202ENST00000431742 FAM217BQ9NTX9 383 aaPredicted RBP16.75■□□□□ 0.27
CSTF3-202ENST00000431742 PLEKHA8P1O95397 391 aa16.74■□□□□ 0.27
CSTF3-202ENST00000431742 MAPK4P31152 587 aa16.74■□□□□ 0.27
CSTF3-202ENST00000431742 STAT3P40763 770 aa16.74■□□□□ 0.27
CSTF3-202ENST00000431742 PSMC4P43686 418 aa16.74■□□□□ 0.27
CSTF3-202ENST00000431742 GNAQP50148 359 aa16.74■□□□□ 0.27
CSTF3-202ENST00000431742 NEK4P51957 841 aa16.74■□□□□ 0.27
CSTF3-202ENST00000431742 AK2P54819 239 aa16.74■□□□□ 0.27
CSTF3-202ENST00000431742 FCGRTP55899 365 aa16.74■□□□□ 0.27
CSTF3-202ENST00000431742 SNAP25P60880 206 aa16.74■□□□□ 0.27
CSTF3-202ENST00000431742 KIF22Q14807 665 aa16.74■□□□□ 0.27
CSTF3-202ENST00000431742 SNRNP48Q6IEG0 339 aaKnown RBP16.74■□□□□ 0.27
CSTF3-202ENST00000431742 TMTC3Q6ZXV5 915 aa16.74■□□□□ 0.27
CSTF3-202ENST00000431742 CCDC144CPQ8IYA2 1237 aa16.74■□□□□ 0.27
CSTF3-202ENST00000431742 LZTS2Q9BRK4 669 aa16.74■□□□□ 0.27
CSTF3-202ENST00000431742 EFCC1Q9HA90 598 aa16.74■□□□□ 0.27
CSTF3-202ENST00000431742 RAVER2Q9HCJ3 691 aaKnown RBP16.74■□□□□ 0.27
CSTF3-202ENST00000431742 RBM28Q9NW13 759 aaKnown RBP16.74■□□□□ 0.27
CSTF3-202ENST00000431742 GOLGA8AA7E2F4 631 aa16.73■□□□□ 0.27
CSTF3-202ENST00000431742 SLC25A27O95847 323 aa16.73■□□□□ 0.27
CSTF3-202ENST00000431742 GNRH1P01148 92 aa16.73■□□□□ 0.27
CSTF3-202ENST00000431742 ICAM1P05362 532 aa16.73■□□□□ 0.27
CSTF3-202ENST00000431742 ERCC3P19447 782 aa16.73■□□□□ 0.27
CSTF3-202ENST00000431742 PDIA3P30101 505 aaKnown RBP16.73■□□□□ 0.27
CSTF3-202ENST00000431742 COPB2P35606 906 aa16.73■□□□□ 0.27
CSTF3-202ENST00000431742 FUT2Q10981 343 aa16.73■□□□□ 0.27
CSTF3-202ENST00000431742 PLS1Q14651 629 aa16.73■□□□□ 0.27
CSTF3-202ENST00000431742 PPP2R5BQ15173 497 aa16.73■□□□□ 0.27
CSTF3-202ENST00000431742 RABEP1Q15276 862 aa16.73■□□□□ 0.27
CSTF3-202ENST00000431742 ANKRD1Q15327 319 aa16.73■□□□□ 0.27
CSTF3-202ENST00000431742 CDC37Q16543 378 aaPredicted RBP16.73■□□□□ 0.27
CSTF3-202ENST00000431742 RTN1Q16799 776 aa16.73■□□□□ 0.27
CSTF3-202ENST00000431742 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.73■□□□□ 0.27
CSTF3-202ENST00000431742 GPR142Q7Z601 462 aa16.73■□□□□ 0.27
CSTF3-202ENST00000431742 CPXCR1Q8N123 301 aa16.73■□□□□ 0.27
CSTF3-202ENST00000431742 ZNF274Q96GC6 653 aaPredicted RBP16.73■□□□□ 0.27
CSTF3-202ENST00000431742 MROH8Q9H579 483 aa16.73■□□□□ 0.27
CSTF3-202ENST00000431742 RIPK3Q9Y572 518 aa16.73■□□□□ 0.27
CSTF3-202ENST00000431742 HTTP42858 3142 aa16.73■□□□□ 0.27
CSTF3-202ENST00000431742 CDC27P30260 824 aa16.72■□□□□ 0.27
CSTF3-202ENST00000431742 METAP2P50579 478 aaKnown RBP eCLIP16.72■□□□□ 0.27
CSTF3-202ENST00000431742 CCDC174Q6PII3 467 aa16.72■□□□□ 0.27
CSTF3-202ENST00000431742 OTOP1Q7RTM1 612 aa16.72■□□□□ 0.27
CSTF3-202ENST00000431742 SRBD1Q8N5C6 995 aaKnown RBP16.72■□□□□ 0.27
CSTF3-202ENST00000431742 AGBL1Q96MI9 1066 aa16.72■□□□□ 0.27
CSTF3-202ENST00000431742 TPCN1Q9ULQ1 816 aa16.72■□□□□ 0.27
CSTF3-202ENST00000431742 CTDP1Q9Y5B0 961 aaPredicted RBP16.72■□□□□ 0.27
CSTF3-202ENST00000431742 CNTNAP5Q8WYK1 1306 aa16.71■□□□□ 0.27
CSTF3-202ENST00000431742 TNPO2O14787 897 aaKnown RBP16.71■□□□□ 0.27
CSTF3-202ENST00000431742 FMNL1O95466 1100 aaPredicted RBP16.71■□□□□ 0.27
CSTF3-202ENST00000431742 ARHGEF6Q15052 776 aa16.71■□□□□ 0.27
CSTF3-202ENST00000431742 QRICH1Q2TAL8 776 aa16.71■□□□□ 0.27
CSTF3-202ENST00000431742 TKFCQ3LXA3 575 aa16.71■□□□□ 0.27
CSTF3-202ENST00000431742 PLEKHH3Q7Z736 793 aa16.71■□□□□ 0.27
CSTF3-202ENST00000431742 CTU1Q7Z7A3 348 aaKnown RBP16.71■□□□□ 0.27
CSTF3-202ENST00000431742 CMTR1Q8N1G2 835 aaKnown RBP16.71■□□□□ 0.27
CSTF3-202ENST00000431742 IL27Q8NEV9 243 aa16.71■□□□□ 0.27
CSTF3-202ENST00000431742 LARP6Q9BRS8 491 aaKnown RBP16.71■□□□□ 0.27
CSTF3-202ENST00000431742 PNMA2Q9UL42 364 aa16.71■□□□□ 0.27
CSTF3-202ENST00000431742 CCPG1Q9ULG6 757 aa16.71■□□□□ 0.27
CSTF3-202ENST00000431742 NAP1L2Q9ULW6 460 aaPredicted RBP16.71■□□□□ 0.27
CSTF3-202ENST00000431742 LRRC37A2A6NM11 1700 aa16.7■□□□□ 0.26
CSTF3-202ENST00000431742 ZBTB5O15062 677 aa16.7■□□□□ 0.26
CSTF3-202ENST00000431742 DHX16O60231 1041 aaKnown RBP16.7■□□□□ 0.26
CSTF3-202ENST00000431742 PPP1R11O60927 126 aaPredicted RBP16.7■□□□□ 0.26
CSTF3-202ENST00000431742 ECM2O94769 699 aaPredicted RBP16.7■□□□□ 0.26
CSTF3-202ENST00000431742 TAL1P17542 331 aaPredicted RBP16.7■□□□□ 0.26
CSTF3-202ENST00000431742 PTPREP23469 700 aa16.7■□□□□ 0.26
CSTF3-202ENST00000431742 GRB14Q14449 540 aa16.7■□□□□ 0.26
CSTF3-202ENST00000431742 MORN1Q5T089 497 aa16.7■□□□□ 0.26
CSTF3-202ENST00000431742 NCAPG2Q86XI2 1143 aa16.7■□□□□ 0.26
CSTF3-202ENST00000431742 CHST13Q8NET6 341 aa16.7■□□□□ 0.26
CSTF3-202ENST00000431742 USP6NLQ92738 828 aa16.7■□□□□ 0.26
CSTF3-202ENST00000431742 COA7Q96BR5 231 aa16.7■□□□□ 0.26
CSTF3-202ENST00000431742 PIGSQ96S52 555 aa16.7■□□□□ 0.26
CSTF3-202ENST00000431742 VAT1LQ9HCJ6 419 aa16.7■□□□□ 0.26
CSTF3-202ENST00000431742 SRRDQ9UH36 339 aa16.7■□□□□ 0.26
CSTF3-202ENST00000431742 GJD2Q9UKL4 321 aa16.7■□□□□ 0.26
CSTF3-202ENST00000431742 TRIM17Q9Y577 477 aa16.7■□□□□ 0.26
CSTF3-202ENST00000431742 MCM3APO60318 1980 aa16.69■□□□□ 0.26
CSTF3-202ENST00000431742 CCDC196A0A1B0GTZ2 297 aa16.69■□□□□ 0.26
CSTF3-202ENST00000431742 PFKFB2O60825 505 aa16.69■□□□□ 0.26
CSTF3-202ENST00000431742 ADD1P35611 737 aaKnown RBP16.69■□□□□ 0.26
CSTF3-202ENST00000431742 PRMT2P55345 433 aa16.69■□□□□ 0.26
CSTF3-202ENST00000431742 PRKCZQ05513 592 aa16.69■□□□□ 0.26
CSTF3-202ENST00000431742 NTRK3Q16288 839 aa16.69■□□□□ 0.26
CSTF3-202ENST00000431742 CCAR1Q8IX12 1150 aaKnown RBP16.69■□□□□ 0.26
CSTF3-202ENST00000431742 ABRAQ8N0Z2 381 aa16.69■□□□□ 0.26
CSTF3-202ENST00000431742 RNF146Q9NTX7 359 aa16.69■□□□□ 0.26
CSTF3-202ENST00000431742 FBXO40Q9UH90 709 aa16.69■□□□□ 0.26
CSTF3-202ENST00000431742 PNMA6FA0A0J9YX94 578 aa16.68■□□□□ 0.26
CSTF3-202ENST00000431742 SLC15A5A6NIM6 579 aa16.68■□□□□ 0.26
CSTF3-202ENST00000431742 STRNO43815 780 aa16.68■□□□□ 0.26
CSTF3-202ENST00000431742 LARGE1O95461 756 aa16.68■□□□□ 0.26
CSTF3-202ENST00000431742 ALAS1P13196 640 aa16.68■□□□□ 0.26
CSTF3-202ENST00000431742 WDR78Q5VTH9 848 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms