RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 SLC35G1Q2M3R5 365 aa21.43■■□□□ 1.02
RFTN1-202ENST00000431547 CCDC174Q6PII3 467 aa21.43■■□□□ 1.02
RFTN1-202ENST00000431547 OTOP1Q7RTM1 612 aa21.43■■□□□ 1.02
RFTN1-202ENST00000431547 PLEKHH3Q7Z736 793 aa21.43■■□□□ 1.02
RFTN1-202ENST00000431547 CTU1Q7Z7A3 348 aaKnown RBP21.43■■□□□ 1.02
RFTN1-202ENST00000431547 NBPF11Q86T75 865 aa21.43■■□□□ 1.02
RFTN1-202ENST00000431547 CCDC144CPQ8IYA2 1237 aa21.43■■□□□ 1.02
RFTN1-202ENST00000431547 COA7Q96BR5 231 aa21.43■■□□□ 1.02
RFTN1-202ENST00000431547 MTMR8Q96EF0 704 aa21.43■■□□□ 1.02
RFTN1-202ENST00000431547 ZNF274Q96GC6 653 aaPredicted RBP21.43■■□□□ 1.02
RFTN1-202ENST00000431547 VAT1LQ9HCJ6 419 aa21.43■■□□□ 1.02
RFTN1-202ENST00000431547 RBM28Q9NW13 759 aaKnown RBP21.43■■□□□ 1.02
RFTN1-202ENST00000431547 HPS5Q9UPZ3 1129 aa21.43■■□□□ 1.02
RFTN1-202ENST00000431547 GOLGA8AA7E2F4 631 aa21.42■■□□□ 1.02
RFTN1-202ENST00000431547 GOLGA8BA8MQT2 603 aa21.42■■□□□ 1.02
RFTN1-202ENST00000431547 DHX16O60231 1041 aaKnown RBP21.42■■□□□ 1.02
RFTN1-202ENST00000431547 ECM2O94769 699 aaPredicted RBP21.42■■□□□ 1.02
RFTN1-202ENST00000431547 PDIA3P30101 505 aaKnown RBP21.42■■□□□ 1.02
RFTN1-202ENST00000431547 RTN1Q16799 776 aa21.42■■□□□ 1.02
RFTN1-202ENST00000431547 TKFCQ3LXA3 575 aa21.42■■□□□ 1.02
RFTN1-202ENST00000431547 GPR142Q7Z601 462 aa21.42■■□□□ 1.02
RFTN1-202ENST00000431547 NCAPG2Q86XI2 1143 aa21.42■■□□□ 1.02
RFTN1-202ENST00000431547 IL27Q8NEV9 243 aa21.42■■□□□ 1.02
RFTN1-202ENST00000431547 AGBL1Q96MI9 1066 aa21.42■■□□□ 1.02
RFTN1-202ENST00000431547 SPZ1Q9BXG8 430 aa21.42■■□□□ 1.02
RFTN1-202ENST00000431547 NAP1L2Q9ULW6 460 aaPredicted RBP21.42■■□□□ 1.02
RFTN1-202ENST00000431547 RIPK3Q9Y572 518 aa21.42■■□□□ 1.02
RFTN1-202ENST00000431547 TRIM17Q9Y577 477 aa21.42■■□□□ 1.02
RFTN1-202ENST00000431547 NID2Q14112 1375 aa21.41■■□□□ 1.02
RFTN1-202ENST00000431547 CCDC196A0A1B0GTZ2 297 aa21.41■■□□□ 1.02
RFTN1-202ENST00000431547 CYTH3O43739 400 aa21.41■■□□□ 1.02
RFTN1-202ENST00000431547 STRNO43815 780 aa21.41■■□□□ 1.02
RFTN1-202ENST00000431547 METAP2P50579 478 aaKnown RBP eCLIP21.41■■□□□ 1.02
RFTN1-202ENST00000431547 AK2P54819 239 aa21.41■■□□□ 1.02
RFTN1-202ENST00000431547 PRMT2P55345 433 aa21.41■■□□□ 1.02
RFTN1-202ENST00000431547 CDC37Q16543 378 aaPredicted RBP21.41■■□□□ 1.02
RFTN1-202ENST00000431547 TMTC3Q6ZXV5 915 aa21.41■■□□□ 1.02
RFTN1-202ENST00000431547 SRBD1Q8N5C6 995 aaKnown RBP21.41■■□□□ 1.02
RFTN1-202ENST00000431547 CWC22Q9HCG8 908 aaKnown RBP21.41■■□□□ 1.02
RFTN1-202ENST00000431547 FAM217BQ9NTX9 383 aaPredicted RBP21.41■■□□□ 1.02
RFTN1-202ENST00000431547 SRRDQ9UH36 339 aa21.41■■□□□ 1.02
RFTN1-202ENST00000431547 GJD2Q9UKL4 321 aa21.41■■□□□ 1.02
RFTN1-202ENST00000431547 PARP14Q460N5 1801 aa21.41■■□□□ 1.02
RFTN1-202ENST00000431547 PLEKHA8P1O95397 391 aa21.4■■□□□ 1.02
RFTN1-202ENST00000431547 PTPREP23469 700 aa21.4■■□□□ 1.02
RFTN1-202ENST00000431547 RABEP1Q15276 862 aa21.4■■□□□ 1.02
RFTN1-202ENST00000431547 PKN2Q16513 984 aaKnown RBP21.4■■□□□ 1.02
RFTN1-202ENST00000431547 WDR78Q5VTH9 848 aa21.4■■□□□ 1.02
RFTN1-202ENST00000431547 CHST13Q8NET6 341 aa21.4■■□□□ 1.02
RFTN1-202ENST00000431547 FBXO40Q9UH90 709 aa21.4■■□□□ 1.02
RFTN1-202ENST00000431547 CCPG1Q9ULG6 757 aa21.4■■□□□ 1.02
RFTN1-202ENST00000431547 SLC15A5A6NIM6 579 aa21.39■■□□□ 1.01
RFTN1-202ENST00000431547 ZBTB5O15062 677 aa21.39■■□□□ 1.01
RFTN1-202ENST00000431547 CDC27P30260 824 aa21.39■■□□□ 1.01
RFTN1-202ENST00000431547 SLC4A3P48751 1232 aa21.39■■□□□ 1.01
RFTN1-202ENST00000431547 QRICH1Q2TAL8 776 aa21.39■■□□□ 1.01
RFTN1-202ENST00000431547 MORN1Q5T089 497 aa21.39■■□□□ 1.01
RFTN1-202ENST00000431547 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.39■■□□□ 1.01
RFTN1-202ENST00000431547 ABRAQ8N0Z2 381 aa21.39■■□□□ 1.01
RFTN1-202ENST00000431547 LARP6Q9BRS8 491 aaKnown RBP21.39■■□□□ 1.01
RFTN1-202ENST00000431547 IVNS1ABPQ9Y6Y0 642 aa21.39■■□□□ 1.01
RFTN1-202ENST00000431547 PNMA6FA0A0J9YX94 578 aa21.38■■□□□ 1.01
RFTN1-202ENST00000431547 FCER1AP12319 257 aa21.38■■□□□ 1.01
RFTN1-202ENST00000431547 ALAS1P13196 640 aa21.38■■□□□ 1.01
RFTN1-202ENST00000431547 ADD1P35611 737 aaKnown RBP21.38■■□□□ 1.01
RFTN1-202ENST00000431547 PRKCZQ05513 592 aa21.38■■□□□ 1.01
RFTN1-202ENST00000431547 FUT2Q10981 343 aa21.38■■□□□ 1.01
RFTN1-202ENST00000431547 CMTR1Q8N1G2 835 aaKnown RBP21.38■■□□□ 1.01
RFTN1-202ENST00000431547 SOCS4Q8WXH5 440 aa21.38■■□□□ 1.01
RFTN1-202ENST00000431547 USP6NLQ92738 828 aa21.38■■□□□ 1.01
RFTN1-202ENST00000431547 TRERF1Q96PN7 1200 aa21.38■■□□□ 1.01
RFTN1-202ENST00000431547 PIGSQ96S52 555 aa21.38■■□□□ 1.01
RFTN1-202ENST00000431547 NUDT12Q9BQG2 462 aa21.38■■□□□ 1.01
RFTN1-202ENST00000431547 TPCN1Q9ULQ1 816 aa21.38■■□□□ 1.01
RFTN1-202ENST00000431547 GABRQQ9UN88 632 aa21.38■■□□□ 1.01
RFTN1-202ENST00000431547 PTPN22Q9Y2R2 807 aa21.38■■□□□ 1.01
RFTN1-202ENST00000431547 FLT3LGP49771 235 aa21.37■■□□□ 1.01
RFTN1-202ENST00000431547 TRAF1Q13077 416 aa21.37■■□□□ 1.01
RFTN1-202ENST00000431547 GRB14Q14449 540 aa21.37■■□□□ 1.01
RFTN1-202ENST00000431547 FBXO11Q86XK2 927 aa21.37■■□□□ 1.01
RFTN1-202ENST00000431547 RRP36Q96EU6 259 aaKnown RBP21.37■■□□□ 1.01
RFTN1-202ENST00000431547 AMNQ9BXJ7 453 aa21.37■■□□□ 1.01
RFTN1-202ENST00000431547 RNF146Q9NTX7 359 aa21.37■■□□□ 1.01
RFTN1-202ENST00000431547 IRF5Q13568 498 aa21.36■■□□□ 1.01
RFTN1-202ENST00000431547 KCTD2Q14681 263 aa21.36■■□□□ 1.01
RFTN1-202ENST00000431547 HOMER1Q86YM7 354 aa21.36■■□□□ 1.01
RFTN1-202ENST00000431547 CCDC82Q8N4S0 544 aa21.36■■□□□ 1.01
RFTN1-202ENST00000431547 MMP19Q99542 508 aa21.36■■□□□ 1.01
RFTN1-202ENST00000431547 ACAD9Q9H845 621 aa21.36■■□□□ 1.01
RFTN1-202ENST00000431547 HOMER2Q9NSB8 354 aa21.36■■□□□ 1.01
RFTN1-202ENST00000431547 PPP1R11O60927 126 aaPredicted RBP21.35■■□□□ 1.01
RFTN1-202ENST00000431547 CCT2P78371 535 aaKnown RBP21.35■■□□□ 1.01
RFTN1-202ENST00000431547 MAP2K5Q13163 448 aa21.35■■□□□ 1.01
RFTN1-202ENST00000431547 COL13A1Q5TAT6 717 aaPredicted RBP21.35■■□□□ 1.01
RFTN1-202ENST00000431547 FBXO46Q6PJ61 603 aaPredicted RBP21.35■■□□□ 1.01
RFTN1-202ENST00000431547 ABCB11O95342 1321 aa21.34■■□□□ 1.01
RFTN1-202ENST00000431547 CASP8AP2Q9UKL3 1982 aa21.34■■□□□ 1.01
RFTN1-202ENST00000431547 PFKFB2O60825 505 aa21.34■■□□□ 1.01
RFTN1-202ENST00000431547 HOXC6P09630 235 aa21.34■■□□□ 1.01
RFTN1-202ENST00000431547 XRCC5P13010 732 aaKnown RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms