RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 DUSP10Q9Y6W6 482 aa3.65□□□□□ -1.83
CDC40-204ENST00000431461 SH3D21A4FU49 640 aa3.64□□□□□ -1.83
CDC40-204ENST00000431461 SLPIP03973 132 aa3.64□□□□□ -1.83
CDC40-204ENST00000431461 PFKLP17858 780 aa3.64□□□□□ -1.83
CDC40-204ENST00000431461 IGFBP6P24592 240 aaPredicted RBP3.64□□□□□ -1.83
CDC40-204ENST00000431461 CHMP4BP1P59074 171 aa3.64□□□□□ -1.83
CDC40-204ENST00000431461 RNF4P78317 190 aa3.64□□□□□ -1.83
CDC40-204ENST00000431461 MPP2Q14168 576 aa3.64□□□□□ -1.83
CDC40-204ENST00000431461 TARBP2Q15633 366 aaKnown RBP3.64□□□□□ -1.83
CDC40-204ENST00000431461 BBS9Q3SYG4 887 aa3.64□□□□□ -1.83
CDC40-204ENST00000431461 HSF5Q4G112 596 aaPredicted RBP3.64□□□□□ -1.83
CDC40-204ENST00000431461 NBPF12Q5TAG4 269 aaPredicted RBP3.64□□□□□ -1.83
CDC40-204ENST00000431461 LIPIQ6XZB0 460 aa3.64□□□□□ -1.83
CDC40-204ENST00000431461 FCRL2Q96LA5 508 aaPredicted RBP3.64□□□□□ -1.83
CDC40-204ENST00000431461 RSRP1Q9BUV0 290 aa3.64□□□□□ -1.83
CDC40-204ENST00000431461 PRDM14Q9GZV8 571 aa3.64□□□□□ -1.83
CDC40-204ENST00000431461 SUSD2Q9UGT4 822 aa3.64□□□□□ -1.83
CDC40-204ENST00000431461 ACSL6Q9UKU0 697 aa3.64□□□□□ -1.83
CDC40-204ENST00000431461 GPR55Q9Y2T6 319 aaPredicted RBP3.64□□□□□ -1.83
CDC40-204ENST00000431461 TAF6LQ9Y6J9 622 aa3.64□□□□□ -1.83
CDC40-204ENST00000431461 A0A1W2PQ45 241 aaPredicted RBP3.63□□□□□ -1.83
CDC40-204ENST00000431461 A0A1W2PQY0 241 aa3.63□□□□□ -1.83
CDC40-204ENST00000431461 F6X3S4 739 aa3.63□□□□□ -1.83
CDC40-204ENST00000431461 MEIS1O00470 390 aa3.63□□□□□ -1.83
CDC40-204ENST00000431461 FZD7O75084 574 aa3.63□□□□□ -1.83
CDC40-204ENST00000431461 UBOX5O94941 541 aa3.63□□□□□ -1.83
CDC40-204ENST00000431461 SYPP08247 313 aa3.63□□□□□ -1.83
CDC40-204ENST00000431461 PRKCAP17252 672 aa3.63□□□□□ -1.83
CDC40-204ENST00000431461 DAB2P98082 770 aa3.63□□□□□ -1.83
CDC40-204ENST00000431461 EAPPQ56P03 285 aaPredicted RBP3.63□□□□□ -1.83
CDC40-204ENST00000431461 REC114Q7Z4M0 266 aa3.63□□□□□ -1.83
CDC40-204ENST00000431461 TMC3Q7Z5M5 1100 aa3.63□□□□□ -1.83
CDC40-204ENST00000431461 RELL1Q8IUW5 271 aa3.63□□□□□ -1.83
CDC40-204ENST00000431461 LOXL4Q96JB6 756 aa3.63□□□□□ -1.83
CDC40-204ENST00000431461 RHOVQ96L33 236 aa3.63□□□□□ -1.83
CDC40-204ENST00000431461 PLA2G2DQ9UNK4 145 aa3.63□□□□□ -1.83
CDC40-204ENST00000431461 MINPP1Q9UNW1 487 aa3.63□□□□□ -1.83
CDC40-204ENST00000431461 HCFC2Q9Y5Z7 792 aa3.63□□□□□ -1.83
CDC40-204ENST00000431461 ANKRD33BA6NCL7 494 aa3.62□□□□□ -1.83
CDC40-204ENST00000431461 SIGLEC6O43699 453 aa3.62□□□□□ -1.83
CDC40-204ENST00000431461 PRAMEF1O95521 474 aa3.62□□□□□ -1.83
CDC40-204ENST00000431461 CTSHP09668 335 aa3.62□□□□□ -1.83
CDC40-204ENST00000431461 ENDOUP21128 410 aaKnown RBP3.62□□□□□ -1.83
CDC40-204ENST00000431461 CYP4F8P98187 520 aa3.62□□□□□ -1.83
CDC40-204ENST00000431461 RAD51AP2Q09MP3 1159 aa3.62□□□□□ -1.83
CDC40-204ENST00000431461 MLECQ14165 292 aa3.62□□□□□ -1.83
CDC40-204ENST00000431461 VWA3BQ502W6 1294 aa3.62□□□□□ -1.83
CDC40-204ENST00000431461 CRIP3Q6Q6R5 217 aa3.62□□□□□ -1.83
CDC40-204ENST00000431461 RPTNQ6XPR3 784 aa3.62□□□□□ -1.83
CDC40-204ENST00000431461 DNAJC14Q6Y2X3 702 aaPredicted RBP3.62□□□□□ -1.83
CDC40-204ENST00000431461 SAPCD2Q86UD0 394 aa3.62□□□□□ -1.83
CDC40-204ENST00000431461 SLCO6A1Q86UG4 719 aa3.62□□□□□ -1.83
CDC40-204ENST00000431461 NUP43Q8NFH3 380 aa3.62□□□□□ -1.83
CDC40-204ENST00000431461 ZNF526Q8TF50 670 aaPredicted RBP3.62□□□□□ -1.83
CDC40-204ENST00000431461 DVL3Q92997 716 aaPredicted RBP3.62□□□□□ -1.83
CDC40-204ENST00000431461 C8orf49Q96NF6 230 aa3.62□□□□□ -1.83
CDC40-204ENST00000431461 TMEM74Q96NL1 305 aa3.62□□□□□ -1.83
CDC40-204ENST00000431461 LNPKQ9C0E8 428 aa3.62□□□□□ -1.83
CDC40-204ENST00000431461 TNFRSF12AQ9NP84 129 aa3.62□□□□□ -1.83
CDC40-204ENST00000431461 NOBOXO60393 691 aa3.61□□□□□ -1.83
CDC40-204ENST00000431461 ATE1O95260 518 aa3.61□□□□□ -1.83
CDC40-204ENST00000431461 PLA2G1BP04054 148 aaKnown RBP3.61□□□□□ -1.83
CDC40-204ENST00000431461 MSL3P1P0C860 447 aa3.61□□□□□ -1.83
CDC40-204ENST00000431461 TGM1P22735 817 aa3.61□□□□□ -1.83
CDC40-204ENST00000431461 CEBPAP49715 358 aaPredicted RBP3.61□□□□□ -1.83
CDC40-204ENST00000431461 SNW1Q13573 536 aaKnown RBP3.61□□□□□ -1.83
CDC40-204ENST00000431461 PWP1Q13610 501 aa3.61□□□□□ -1.83
CDC40-204ENST00000431461 NR1I3Q14994 352 aa3.61□□□□□ -1.83
CDC40-204ENST00000431461 PLEKHN1Q494U1 663 aaPredicted RBP3.61□□□□□ -1.83
CDC40-204ENST00000431461 ARSHQ5FYA8 562 aa3.61□□□□□ -1.83
CDC40-204ENST00000431461 CDCP2Q5VXM1 449 aa3.61□□□□□ -1.83
CDC40-204ENST00000431461 GOLM1Q8NBJ4 401 aa3.61□□□□□ -1.83
CDC40-204ENST00000431461 TMEM52Q8NDY8 209 aa3.61□□□□□ -1.83
CDC40-204ENST00000431461 NAF1Q96HR8 494 aaKnown RBP3.61□□□□□ -1.83
CDC40-204ENST00000431461 BCL2L13Q9BXK5 485 aa3.61□□□□□ -1.83
CDC40-204ENST00000431461 PARP2Q9UGN5 583 aa3.61□□□□□ -1.83
CDC40-204ENST00000431461 ROBO2Q9HCK4 1378 aa3.61□□□□□ -1.83
CDC40-204ENST00000431461 RAG1P15918 1043 aa3.6□□□□□ -1.83
CDC40-204ENST00000431461 GARTP22102 1010 aa3.6□□□□□ -1.83
CDC40-204ENST00000431461 GBP2P32456 591 aaPredicted RBP3.6□□□□□ -1.83
CDC40-204ENST00000431461 BMP8BP34820 402 aa3.6□□□□□ -1.83
CDC40-204ENST00000431461 CCNFP41002 786 aa3.6□□□□□ -1.83
CDC40-204ENST00000431461 MAPKAPK2P49137 400 aa3.6□□□□□ -1.83
CDC40-204ENST00000431461 PSMD2Q13200 908 aa3.6□□□□□ -1.83
CDC40-204ENST00000431461 ZC3H14Q6PJT7 736 aaKnown RBP3.6□□□□□ -1.83
CDC40-204ENST00000431461 FAM196AQ6ZSG2 479 aa3.6□□□□□ -1.83
CDC40-204ENST00000431461 TMC4Q7Z404 712 aa3.6□□□□□ -1.83
CDC40-204ENST00000431461 SPRED1Q7Z699 444 aa3.6□□□□□ -1.83
CDC40-204ENST00000431461 Q8N1X5 172 aa3.6□□□□□ -1.83
CDC40-204ENST00000431461 FNIP1Q8TF40 1166 aa3.6□□□□□ -1.83
CDC40-204ENST00000431461 EAF1Q96JC9 268 aaPredicted RBP3.6□□□□□ -1.83
CDC40-204ENST00000431461 CDADC1Q9BWV3 514 aa3.6□□□□□ -1.83
CDC40-204ENST00000431461 PCED1AQ9H1Q7 454 aa3.6□□□□□ -1.83
CDC40-204ENST00000431461 CHST7Q9NS84 486 aa3.6□□□□□ -1.83
CDC40-204ENST00000431461 ERVK13-1Q9NX77 482 aa3.6□□□□□ -1.83
CDC40-204ENST00000431461 GMIPQ9P107 970 aa3.6□□□□□ -1.83
CDC40-204ENST00000431461 IMPACTQ9P2X3 320 aa3.6□□□□□ -1.83
CDC40-204ENST00000431461 FAN1Q9Y2M0 1017 aa3.6□□□□□ -1.83
CDC40-204ENST00000431461 TSC22D4Q9Y3Q8 395 aa3.6□□□□□ -1.83
CDC40-204ENST00000431461 PMF1-BGLAPU3KQ54 211 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms