RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 FAM151AQ8WW52 585 aa18.98■□□□□ 0.63
USHBP1-203ENST00000431146 TRIM5Q9C035 493 aa18.98■□□□□ 0.63
USHBP1-203ENST00000431146 NAT10Q9H0A0 1025 aaKnown RBP18.98■□□□□ 0.63
USHBP1-203ENST00000431146 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.98■□□□□ 0.63
USHBP1-203ENST00000431146 PNMA6FA0A0J9YX94 578 aa18.97■□□□□ 0.63
USHBP1-203ENST00000431146 RASSF7Q02833 373 aa18.97■□□□□ 0.63
USHBP1-203ENST00000431146 LETM2Q2VYF4 491 aa18.97■□□□□ 0.63
USHBP1-203ENST00000431146 HS1BP3Q53T59 392 aa18.97■□□□□ 0.63
USHBP1-203ENST00000431146 MIGA2Q7L4E1 593 aa18.97■□□□□ 0.63
USHBP1-203ENST00000431146 ZNF830Q96NB3 372 aaPredicted RBP18.97■□□□□ 0.63
USHBP1-203ENST00000431146 SGIP1Q9BQI5 828 aa18.97■□□□□ 0.63
USHBP1-203ENST00000431146 ARFGEF1Q9Y6D6 1849 aa18.97■□□□□ 0.63
USHBP1-203ENST00000431146 COL2A1P02458 1487 aaPredicted RBP18.97■□□□□ 0.63
USHBP1-203ENST00000431146 NONOQ15233 471 aaKnown RBP eCLIP18.97■□□□□ 0.63
USHBP1-203ENST00000431146 PPP4R3BQ5MIZ7 849 aa18.97■□□□□ 0.63
USHBP1-203ENST00000431146 REXO1Q8N1G1 1221 aaKnown RBP18.97■□□□□ 0.63
USHBP1-203ENST00000431146 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.97■□□□□ 0.63
USHBP1-203ENST00000431146 F5H6K3 240 aa18.96■□□□□ 0.63
USHBP1-203ENST00000431146 WNT10BO00744 389 aa18.96■□□□□ 0.63
USHBP1-203ENST00000431146 EGFRP00533 1210 aa18.96■□□□□ 0.63
USHBP1-203ENST00000431146 CASP1P29466 404 aa18.96■□□□□ 0.63
USHBP1-203ENST00000431146 AFMP43652 599 aa18.96■□□□□ 0.63
USHBP1-203ENST00000431146 KLRC3Q07444 240 aa18.96■□□□□ 0.63
USHBP1-203ENST00000431146 KRT25Q7Z3Z0 450 aa18.96■□□□□ 0.63
USHBP1-203ENST00000431146 TBCKQ8TEA7 893 aa18.96■□□□□ 0.63
USHBP1-203ENST00000431146 A0A1W2PRG0 241 aa18.95■□□□□ 0.62
USHBP1-203ENST00000431146 CCNT1O60563 726 aaKnown RBP18.95■□□□□ 0.62
USHBP1-203ENST00000431146 ADCY7P51828 1080 aa18.95■□□□□ 0.62
USHBP1-203ENST00000431146 SNAP25P60880 206 aa18.95■□□□□ 0.62
USHBP1-203ENST00000431146 UBE2SQ16763 222 aa18.95■□□□□ 0.62
USHBP1-203ENST00000431146 FAM177A1Q8N128 213 aaPredicted RBP18.95■□□□□ 0.62
USHBP1-203ENST00000431146 MYOZ2Q9NPC6 264 aa18.95■□□□□ 0.62
USHBP1-203ENST00000431146 HERC5Q9UII4 1024 aaKnown RBP18.95■□□□□ 0.62
USHBP1-203ENST00000431146 ESYT2A0FGR8 921 aa18.95■□□□□ 0.62
USHBP1-203ENST00000431146 ZBTB5O15062 677 aa18.95■□□□□ 0.62
USHBP1-203ENST00000431146 NDUFB10O96000 172 aa18.95■□□□□ 0.62
USHBP1-203ENST00000431146 BMP6P22004 513 aa18.95■□□□□ 0.62
USHBP1-203ENST00000431146 ZNF75DP51815 510 aa18.95■□□□□ 0.62
USHBP1-203ENST00000431146 SPICE1Q8N0Z3 855 aa18.95■□□□□ 0.62
USHBP1-203ENST00000431146 DCAF4Q8WV16 495 aa18.95■□□□□ 0.62
USHBP1-203ENST00000431146 STAMQ92783 540 aa18.95■□□□□ 0.62
USHBP1-203ENST00000431146 PP2D1A8MPX8 630 aa18.94■□□□□ 0.62
USHBP1-203ENST00000431146 hCG_1984214I3L0E3 225 aa18.94■□□□□ 0.62
USHBP1-203ENST00000431146 ECE1P42892 770 aa18.94■□□□□ 0.62
USHBP1-203ENST00000431146 PRELPP51888 382 aa18.94■□□□□ 0.62
USHBP1-203ENST00000431146 ARL6IP4Q66PJ3 421 aaKnown RBP18.94■□□□□ 0.62
USHBP1-203ENST00000431146 PLA2G4DQ86XP0 818 aa18.94■□□□□ 0.62
USHBP1-203ENST00000431146 ZNF713Q8N859 430 aaPredicted RBP18.94■□□□□ 0.62
USHBP1-203ENST00000431146 NLGN2Q8NFZ4 835 aa18.94■□□□□ 0.62
USHBP1-203ENST00000431146 HOOK1Q9UJC3 728 aaKnown RBP18.94■□□□□ 0.62
USHBP1-203ENST00000431146 MSNP26038 577 aaKnown RBP18.94■□□□□ 0.62
USHBP1-203ENST00000431146 PTGER2P43116 358 aa18.94■□□□□ 0.62
USHBP1-203ENST00000431146 QRICH1Q2TAL8 776 aa18.94■□□□□ 0.62
USHBP1-203ENST00000431146 MTMR14Q8NCE2 650 aa18.94■□□□□ 0.62
USHBP1-203ENST00000431146 MTMR8Q96EF0 704 aa18.94■□□□□ 0.62
USHBP1-203ENST00000431146 MAN1B1Q9UKM7 699 aa18.94■□□□□ 0.62
USHBP1-203ENST00000431146 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.94■□□□□ 0.62
USHBP1-203ENST00000431146 MYO1BO43795 1136 aa18.93■□□□□ 0.62
USHBP1-203ENST00000431146 SLFN14P0C7P3 912 aa18.93■□□□□ 0.62
USHBP1-203ENST00000431146 IKQ13123 557 aaPredicted RBP18.93■□□□□ 0.62
USHBP1-203ENST00000431146 NEK8Q86SG6 692 aa18.93■□□□□ 0.62
USHBP1-203ENST00000431146 SMARCE1Q969G3 411 aa18.93■□□□□ 0.62
USHBP1-203ENST00000431146 ZBED3Q96IU2 234 aaPredicted RBP18.93■□□□□ 0.62
USHBP1-203ENST00000431146 TTC12Q9H892 705 aaPredicted RBP18.93■□□□□ 0.62
USHBP1-203ENST00000431146 CD2APQ9Y5K6 639 aa18.93■□□□□ 0.62
USHBP1-203ENST00000431146 CDC37Q16543 378 aaPredicted RBP18.92■□□□□ 0.62
USHBP1-203ENST00000431146 DTHD1Q6ZMT9 781 aa18.92■□□□□ 0.62
USHBP1-203ENST00000431146 ELOA2Q8IYF1 753 aaPredicted RBP18.92■□□□□ 0.62
USHBP1-203ENST00000431146 ACER1Q8TDN7 264 aa18.92■□□□□ 0.62
USHBP1-203ENST00000431146 PAGE5Q96GU1 130 aa18.92■□□□□ 0.62
USHBP1-203ENST00000431146 BPIFA3Q9BQP9 254 aa18.92■□□□□ 0.62
USHBP1-203ENST00000431146 ZKSCAN5Q9Y2L8 839 aa18.92■□□□□ 0.62
USHBP1-203ENST00000431146 TAL1P17542 331 aaPredicted RBP18.92■□□□□ 0.62
USHBP1-203ENST00000431146 LONP1P36776 959 aaKnown RBP18.92■□□□□ 0.62
USHBP1-203ENST00000431146 KANK3Q6NY19 840 aa18.92■□□□□ 0.62
USHBP1-203ENST00000431146 DRC7Q8IY82 874 aa18.92■□□□□ 0.62
USHBP1-203ENST00000431146 GMCL1P1Q8NEA9 526 aa18.92■□□□□ 0.62
USHBP1-203ENST00000431146 GJA3Q9Y6H8 435 aa18.92■□□□□ 0.62
USHBP1-203ENST00000431146 TMEM232C9JQI7 657 aa18.91■□□□□ 0.62
USHBP1-203ENST00000431146 TNNI2P48788 182 aa18.91■□□□□ 0.62
USHBP1-203ENST00000431146 NCAPHQ15003 741 aa18.91■□□□□ 0.62
USHBP1-203ENST00000431146 TNIP1Q15025 636 aa18.91■□□□□ 0.62
USHBP1-203ENST00000431146 KARSQ15046 597 aaKnown RBP18.91■□□□□ 0.62
USHBP1-203ENST00000431146 KIAA1755Q5JYT7 1200 aa18.91■□□□□ 0.62
USHBP1-203ENST00000431146 RIC8AQ9NPQ8 531 aa18.91■□□□□ 0.62
USHBP1-203ENST00000431146 NEMFO60524 1076 aa18.91■□□□□ 0.62
USHBP1-203ENST00000431146 SARSP49591 514 aaKnown RBP18.91■□□□□ 0.62
USHBP1-203ENST00000431146 E2F4Q16254 413 aa18.91■□□□□ 0.62
USHBP1-203ENST00000431146 SAMD7Q7Z3H4 446 aa18.91■□□□□ 0.62
USHBP1-203ENST00000431146 CCDC84Q86UT8 332 aaPredicted RBP18.91■□□□□ 0.62
USHBP1-203ENST00000431146 POTEDQ86YR6 584 aa18.91■□□□□ 0.62
USHBP1-203ENST00000431146 NRBP1Q9UHY1 535 aa18.91■□□□□ 0.62
USHBP1-203ENST00000431146 ZBTB21Q9ULJ3 1066 aa18.91■□□□□ 0.62
USHBP1-203ENST00000431146 MYH7BA7E2Y1 1941 aa18.9■□□□□ 0.62
USHBP1-203ENST00000431146 ASTN2O75129 1339 aaPredicted RBP18.9■□□□□ 0.62
USHBP1-203ENST00000431146 SMCHD1A6NHR9 2005 aa18.9■□□□□ 0.62
USHBP1-203ENST00000431146 EDIL3O43854 480 aa18.9■□□□□ 0.62
USHBP1-203ENST00000431146 RBM10P98175 930 aaKnown RBP18.9■□□□□ 0.62
USHBP1-203ENST00000431146 ZYXQ15942 572 aaKnown RBP18.9■□□□□ 0.62
USHBP1-203ENST00000431146 NT5DC1Q5TFE4 455 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms