RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 SKAP1Q86WV1 359 aa11.51□□□□□ -0.57
HDAC6-207ENST00000430858 ANKRD35Q8N283 1001 aa11.51□□□□□ -0.57
HDAC6-207ENST00000430858 MSL3Q8N5Y2 521 aaKnown RBP11.51□□□□□ -0.57
HDAC6-207ENST00000430858 ENAHQ8N8S7 591 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-207ENST00000430858 PNMA1Q8ND90 353 aa11.51□□□□□ -0.57
HDAC6-207ENST00000430858 AGBL1Q96MI9 1066 aa11.51□□□□□ -0.57
HDAC6-207ENST00000430858 RANBP17Q9H2T7 1088 aaKnown RBP11.51□□□□□ -0.57
HDAC6-207ENST00000430858 ACAD9Q9H845 621 aa11.51□□□□□ -0.57
HDAC6-207ENST00000430858 GPCPD1Q9NPB8 672 aa11.51□□□□□ -0.57
HDAC6-207ENST00000430858 DDX20Q9UHI6 824 aaKnown RBP11.51□□□□□ -0.57
HDAC6-207ENST00000430858 PNMA2Q9UL42 364 aa11.51□□□□□ -0.57
HDAC6-207ENST00000430858 COL11A1P12107 1806 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-207ENST00000430858 MKI67P46013 3256 aaKnown RBP11.5□□□□□ -0.57
HDAC6-207ENST00000430858 SEPT4O43236 478 aa11.5□□□□□ -0.57
HDAC6-207ENST00000430858 ICAM1P05362 532 aa11.5□□□□□ -0.57
HDAC6-207ENST00000430858 CENPBP07199 599 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-207ENST00000430858 SNAP25P60880 206 aa11.5□□□□□ -0.57
HDAC6-207ENST00000430858 IFIT1BQ5T764 474 aaKnown RBP11.5□□□□□ -0.57
HDAC6-207ENST00000430858 CCDC174Q6PII3 467 aa11.5□□□□□ -0.57
HDAC6-207ENST00000430858 CASC1Q6TDU7 716 aa11.5□□□□□ -0.57
HDAC6-207ENST00000430858 ZNF467Q7Z7K2 595 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-207ENST00000430858 RALYLQ86SE5 291 aaKnown RBP11.5□□□□□ -0.57
HDAC6-207ENST00000430858 TRPV1Q8NER1 839 aa11.5□□□□□ -0.57
HDAC6-207ENST00000430858 NCOA7Q8NI08 942 aa11.5□□□□□ -0.57
HDAC6-207ENST00000430858 PAWRQ96IZ0 340 aaKnown RBP11.5□□□□□ -0.57
HDAC6-207ENST00000430858 TRERF1Q96PN7 1200 aa11.5□□□□□ -0.57
HDAC6-207ENST00000430858 TINF2Q9BSI4 451 aa11.5□□□□□ -0.57
HDAC6-207ENST00000430858 LSG1Q9H089 658 aaKnown RBP11.5□□□□□ -0.57
HDAC6-207ENST00000430858 HOMER2Q9NSB8 354 aa11.5□□□□□ -0.57
HDAC6-207ENST00000430858 RNF146Q9NTX7 359 aa11.5□□□□□ -0.57
HDAC6-207ENST00000430858 CCPG1Q9ULG6 757 aa11.5□□□□□ -0.57
HDAC6-207ENST00000430858 RBM8AQ9Y5S9 174 aaKnown RBP11.5□□□□□ -0.57
HDAC6-207ENST00000430858 ERICH2A1L162 156 aa11.49□□□□□ -0.57
HDAC6-207ENST00000430858 E7EWF7 191 aa11.49□□□□□ -0.57
HDAC6-207ENST00000430858 ALAS1P13196 640 aa11.49□□□□□ -0.57
HDAC6-207ENST00000430858 SART3Q15020 963 aaKnown RBP11.49□□□□□ -0.57
HDAC6-207ENST00000430858 SEC23AQ15436 765 aa11.49□□□□□ -0.57
HDAC6-207ENST00000430858 ASPRV1Q53RT3 343 aa11.49□□□□□ -0.57
HDAC6-207ENST00000430858 ERICH6BQ5W0A0 696 aa11.49□□□□□ -0.57
HDAC6-207ENST00000430858 MAMDC4Q6UXC1 1216 aa11.49□□□□□ -0.57
HDAC6-207ENST00000430858 CYB5R4Q7L1T6 521 aa11.49□□□□□ -0.57
HDAC6-207ENST00000430858 DIS3LQ8TF46 1054 aaKnown RBP11.49□□□□□ -0.57
HDAC6-207ENST00000430858 DPF3Q92784 378 aa11.49□□□□□ -0.57
HDAC6-207ENST00000430858 A1CFQ9NQ94 594 aaKnown RBP11.49□□□□□ -0.57
HDAC6-207ENST00000430858 CNPY2Q9Y2B0 182 aa11.49□□□□□ -0.57
HDAC6-207ENST00000430858 PFASO15067 1338 aa11.49□□□□□ -0.57
HDAC6-207ENST00000430858 SYNGAP1Q96PV0 1343 aa11.49□□□□□ -0.57
HDAC6-207ENST00000430858 POTEB2H3BUK9 544 aa11.48□□□□□ -0.57
HDAC6-207ENST00000430858 IFIT3O14879 490 aaKnown RBP11.48□□□□□ -0.57
HDAC6-207ENST00000430858 CDC45O75419 566 aa11.48□□□□□ -0.57
HDAC6-207ENST00000430858 PARP1P09874 1014 aaKnown RBP11.48□□□□□ -0.57
HDAC6-207ENST00000430858 GOLGA8HP0CJ92 632 aa11.48□□□□□ -0.57
HDAC6-207ENST00000430858 KCNA4P22459 653 aa11.48□□□□□ -0.57
HDAC6-207ENST00000430858 MNX1P50219 401 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-207ENST00000430858 PRAMEF19Q5SWL8 479 aa11.48□□□□□ -0.57
HDAC6-207ENST00000430858 STOX1Q6ZVD7 989 aa11.48□□□□□ -0.57
HDAC6-207ENST00000430858 C11orf49Q9H6J7 331 aa11.48□□□□□ -0.57
HDAC6-207ENST00000430858 ANO2Q9NQ90 1003 aa11.48□□□□□ -0.57
HDAC6-207ENST00000430858 TAF6LQ9Y6J9 622 aa11.48□□□□□ -0.57
HDAC6-207ENST00000430858 WDR19Q8NEZ3 1342 aa11.48□□□□□ -0.57
HDAC6-207ENST00000430858 WTAPQ15007 396 aa11.47□□□□□ -0.57
HDAC6-207ENST00000430858 NECTIN1Q15223 517 aa11.47□□□□□ -0.57
HDAC6-207ENST00000430858 MUM1L1Q5H9M0 696 aa11.47□□□□□ -0.57
HDAC6-207ENST00000430858 MB21D2Q8IYB1 491 aaPredicted RBP11.47□□□□□ -0.57
HDAC6-207ENST00000430858 FAM133AQ8N9E0 248 aa11.47□□□□□ -0.57
HDAC6-207ENST00000430858 ARRDC4Q8NCT1 418 aa11.47□□□□□ -0.57
HDAC6-207ENST00000430858 MTA3Q9BTC8 594 aa11.47□□□□□ -0.57
HDAC6-207ENST00000430858 UBA5Q9GZZ9 404 aa11.47□□□□□ -0.57
HDAC6-207ENST00000430858 CYP39A1Q9NYL5 469 aa11.47□□□□□ -0.57
HDAC6-207ENST00000430858 NR2E3Q9Y5X4 410 aa11.47□□□□□ -0.57
HDAC6-207ENST00000430858 PDE4DIPQ5VU43 2346 aa11.47□□□□□ -0.57
HDAC6-207ENST00000430858 ASB14A6NK59 587 aa11.46□□□□□ -0.57
HDAC6-207ENST00000430858 DNM1LO00429 736 aa11.46□□□□□ -0.57
HDAC6-207ENST00000430858 SLC27A2O14975 620 aa11.46□□□□□ -0.57
HDAC6-207ENST00000430858 EVI5O60447 810 aa11.46□□□□□ -0.57
HDAC6-207ENST00000430858 SNAI1O95863 264 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-207ENST00000430858 ZNF865P0CJ78 1059 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-207ENST00000430858 RARBP10826 455 aa11.46□□□□□ -0.57
HDAC6-207ENST00000430858 COL6A1P12109 1028 aa11.46□□□□□ -0.57
HDAC6-207ENST00000430858 AKR1A1P14550 325 aa11.46□□□□□ -0.57
HDAC6-207ENST00000430858 CNTN2Q02246 1040 aa11.46□□□□□ -0.57
HDAC6-207ENST00000430858 CDC37Q16543 378 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-207ENST00000430858 RNF20Q5VTR2 975 aa11.46□□□□□ -0.57
HDAC6-207ENST00000430858 CREB3L3Q68CJ9 461 aa11.46□□□□□ -0.57
HDAC6-207ENST00000430858 NSMFQ6X4W1 530 aa11.46□□□□□ -0.57
HDAC6-207ENST00000430858 ADGRF4Q8IZF3 695 aa11.46□□□□□ -0.57
HDAC6-207ENST00000430858 FGD4Q96M96 766 aa11.46□□□□□ -0.57
HDAC6-207ENST00000430858 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-207ENST00000430858 PPP4R2Q9NY27 417 aa11.46□□□□□ -0.57
HDAC6-207ENST00000430858 TAL1P17542 331 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-207ENST00000430858 ANTXR2P58335 489 aa11.45□□□□□ -0.58
HDAC6-207ENST00000430858 ACVR2BQ13705 512 aa11.45□□□□□ -0.58
HDAC6-207ENST00000430858 TMEM67Q5HYA8 995 aa11.45□□□□□ -0.58
HDAC6-207ENST00000430858 ANO1Q5XXA6 986 aa11.45□□□□□ -0.58
HDAC6-207ENST00000430858 ARMCX2Q7L311 632 aa11.45□□□□□ -0.58
HDAC6-207ENST00000430858 CHST3Q7LGC8 479 aa11.45□□□□□ -0.58
HDAC6-207ENST00000430858 CCDC144CPQ8IYA2 1237 aa11.45□□□□□ -0.58
HDAC6-207ENST00000430858 IGDCC4Q8TDY8 1250 aa11.45□□□□□ -0.58
HDAC6-207ENST00000430858 CLEC4DQ8WXI8 215 aa11.45□□□□□ -0.58
HDAC6-207ENST00000430858 MAF1Q9H063 256 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms