RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 FXR1P51114 621 aaKnown RBP eCLIP10.73□□□□□ -0.69
HDAC9-211ENST00000430454 MRPL12P52815 198 aaKnown RBP10.73□□□□□ -0.69
HDAC9-211ENST00000430454 PRAMEF19Q5SWL8 479 aa10.73□□□□□ -0.69
HDAC9-211ENST00000430454 GJC2Q5T442 439 aaPredicted RBP10.73□□□□□ -0.69
HDAC9-211ENST00000430454 KCTD1Q719H9 257 aa10.73□□□□□ -0.69
HDAC9-211ENST00000430454 NUP133Q8WUM0 1156 aa10.73□□□□□ -0.69
HDAC9-211ENST00000430454 TSEN34Q9BSV6 310 aaKnown RBP10.73□□□□□ -0.69
HDAC9-211ENST00000430454 DSCC1Q9BVC3 393 aa10.73□□□□□ -0.69
HDAC9-211ENST00000430454 KRT23Q9C075 422 aa10.73□□□□□ -0.69
HDAC9-211ENST00000430454 UBE2OQ9C0C9 1292 aaKnown RBP10.73□□□□□ -0.69
HDAC9-211ENST00000430454 IL17RBQ9NRM6 502 aa10.73□□□□□ -0.69
HDAC9-211ENST00000430454 HOMER2Q9NSB8 354 aa10.73□□□□□ -0.69
HDAC9-211ENST00000430454 RNF146Q9NTX7 359 aa10.73□□□□□ -0.69
HDAC9-211ENST00000430454 ZHX1Q9UKY1 873 aaPredicted RBP10.73□□□□□ -0.69
HDAC9-211ENST00000430454 RIPK3Q9Y572 518 aa10.73□□□□□ -0.69
HDAC9-211ENST00000430454 MYH4Q9Y623 1939 aa10.73□□□□□ -0.69
HDAC9-211ENST00000430454 DNAJC25-GNG10A0A024R161 153 aa10.72□□□□□ -0.69
HDAC9-211ENST00000430454 DUSP11O75319 330 aaKnown RBP10.72□□□□□ -0.69
HDAC9-211ENST00000430454 ALAS1P13196 640 aa10.72□□□□□ -0.69
HDAC9-211ENST00000430454 HAND2P61296 217 aa10.72□□□□□ -0.69
HDAC9-211ENST00000430454 TRDNQ13061 729 aa10.72□□□□□ -0.69
HDAC9-211ENST00000430454 LRRC41Q15345 812 aa10.72□□□□□ -0.69
HDAC9-211ENST00000430454 LRRC26Q2I0M4 334 aa10.72□□□□□ -0.69
HDAC9-211ENST00000430454 GPATCH4Q5T3I0 446 aaKnown RBP10.72□□□□□ -0.69
HDAC9-211ENST00000430454 SYDE2Q5VT97 1194 aa10.72□□□□□ -0.69
HDAC9-211ENST00000430454 CCDC174Q6PII3 467 aa10.72□□□□□ -0.69
HDAC9-211ENST00000430454 ZNF589Q86UQ0 364 aaPredicted RBP10.72□□□□□ -0.69
HDAC9-211ENST00000430454 DGKHQ86XP1 1220 aa10.72□□□□□ -0.69
HDAC9-211ENST00000430454 PCSK9Q8NBP7 692 aaKnown RBP10.72□□□□□ -0.69
HDAC9-211ENST00000430454 TRERF1Q96PN7 1200 aa10.72□□□□□ -0.69
HDAC9-211ENST00000430454 GDF15Q99988 308 aa10.72□□□□□ -0.69
HDAC9-211ENST00000430454 TMEM47Q9BQJ4 181 aa10.72□□□□□ -0.69
HDAC9-211ENST00000430454 PRO3102Q9H379 93 aa10.72□□□□□ -0.69
HDAC9-211ENST00000430454 ADD3Q9UEY8 706 aaKnown RBP10.72□□□□□ -0.69
HDAC9-211ENST00000430454 CCPG1Q9ULG6 757 aa10.72□□□□□ -0.69
HDAC9-211ENST00000430454 PRR12Q9ULL5 1215 aa10.72□□□□□ -0.69
HDAC9-211ENST00000430454 MTMR7Q9Y216 660 aa10.72□□□□□ -0.69
HDAC9-211ENST00000430454 RAD50Q92878 1312 aa10.72□□□□□ -0.69
HDAC9-211ENST00000430454 LOC102724159A0A0B4J2E5 919 aa10.71□□□□□ -0.69
HDAC9-211ENST00000430454 MOXD2PA6NHM9 499 aa10.71□□□□□ -0.69
HDAC9-211ENST00000430454 NMT2O60551 498 aa10.71□□□□□ -0.69
HDAC9-211ENST00000430454 ICAM1P05362 532 aa10.71□□□□□ -0.69
HDAC9-211ENST00000430454 ZNF865P0CJ78 1059 aaPredicted RBP10.71□□□□□ -0.69
HDAC9-211ENST00000430454 ADCYAP1R1P41586 468 aa10.71□□□□□ -0.69
HDAC9-211ENST00000430454 MAGEA10P43363 369 aaPredicted RBP10.71□□□□□ -0.69
HDAC9-211ENST00000430454 ATN1P54259 1190 aaPredicted RBP10.71□□□□□ -0.69
HDAC9-211ENST00000430454 RTP1P59025 263 aa10.71□□□□□ -0.69
HDAC9-211ENST00000430454 ACVR2BQ13705 512 aa10.71□□□□□ -0.69
HDAC9-211ENST00000430454 PWP2Q15269 919 aaKnown RBP10.71□□□□□ -0.69
HDAC9-211ENST00000430454 PARP14Q460N5 1801 aa10.71□□□□□ -0.69
HDAC9-211ENST00000430454 C1orf53Q5VUE5 145 aa10.71□□□□□ -0.69
HDAC9-211ENST00000430454 ANO1Q5XXA6 986 aa10.71□□□□□ -0.69
HDAC9-211ENST00000430454 BTNL9Q6UXG8 535 aa10.71□□□□□ -0.69
HDAC9-211ENST00000430454 SLC39A5Q6ZMH5 540 aa10.71□□□□□ -0.69
HDAC9-211ENST00000430454 HOMEZQ8IX15 550 aa10.71□□□□□ -0.69
HDAC9-211ENST00000430454 UBAC1Q9BSL1 405 aa10.71□□□□□ -0.69
HDAC9-211ENST00000430454 MAF1Q9H063 256 aa10.71□□□□□ -0.69
HDAC9-211ENST00000430454 KAT14Q9H8E8 782 aa10.71□□□□□ -0.69
HDAC9-211ENST00000430454 INCENPQ9NQS7 918 aa10.71□□□□□ -0.69
HDAC9-211ENST00000430454 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.71□□□□□ -0.69
HDAC9-211ENST00000430454 PHF24Q9UPV7 400 aa10.71□□□□□ -0.69
HDAC9-211ENST00000430454 ATP11BQ9Y2G3 1177 aa10.71□□□□□ -0.69
HDAC9-211ENST00000430454 COL11A1P12107 1806 aaPredicted RBP10.7□□□□□ -0.7
HDAC9-211ENST00000430454 MROH7Q68CQ1 1323 aa10.7□□□□□ -0.7
HDAC9-211ENST00000430454 ZEB2O60315 1214 aa10.7□□□□□ -0.7
HDAC9-211ENST00000430454 SYN1P17600 705 aa10.7□□□□□ -0.7
HDAC9-211ENST00000430454 TRAF1Q13077 416 aa10.7□□□□□ -0.7
HDAC9-211ENST00000430454 TTC22Q5TAA0 569 aa10.7□□□□□ -0.7
HDAC9-211ENST00000430454 GPR153Q6NV75 609 aa10.7□□□□□ -0.7
HDAC9-211ENST00000430454 NOL8Q76FK4 1167 aaKnown RBP10.7□□□□□ -0.7
HDAC9-211ENST00000430454 ARMCX2Q7L311 632 aa10.7□□□□□ -0.7
HDAC9-211ENST00000430454 TDHQ8IZJ6 230 aa10.7□□□□□ -0.7
HDAC9-211ENST00000430454 AGBL1Q96MI9 1066 aa10.7□□□□□ -0.7
HDAC9-211ENST00000430454 SEZ6LQ9BYH1 1024 aa10.7□□□□□ -0.7
HDAC9-211ENST00000430454 RANBP17Q9H2T7 1088 aaKnown RBP10.7□□□□□ -0.7
HDAC9-211ENST00000430454 GPCPD1Q9NPB8 672 aa10.7□□□□□ -0.7
HDAC9-211ENST00000430454 A1CFQ9NQ94 594 aaKnown RBP10.7□□□□□ -0.7
HDAC9-211ENST00000430454 U3KPZ7 1027 aaPredicted RBP10.7□□□□□ -0.7
HDAC9-211ENST00000430454 WDR19Q8NEZ3 1342 aa10.69□□□□□ -0.7
HDAC9-211ENST00000430454 DCDC2CA8MYV0 355 aa10.69□□□□□ -0.7
HDAC9-211ENST00000430454 SNAI1O95863 264 aaPredicted RBP10.69□□□□□ -0.7
HDAC9-211ENST00000430454 PGK1P00558 417 aa10.69□□□□□ -0.7
HDAC9-211ENST00000430454 C6orf222P0C671 652 aaPredicted RBP10.69□□□□□ -0.7
HDAC9-211ENST00000430454 ZNF543Q08ER8 600 aa10.69□□□□□ -0.7
HDAC9-211ENST00000430454 SART3Q15020 963 aaKnown RBP10.69□□□□□ -0.7
HDAC9-211ENST00000430454 CCDC144BQ3MJ40 725 aa10.69□□□□□ -0.7
HDAC9-211ENST00000430454 ASPRV1Q53RT3 343 aa10.69□□□□□ -0.7
HDAC9-211ENST00000430454 NSMFQ6X4W1 530 aa10.69□□□□□ -0.7
HDAC9-211ENST00000430454 TBC1D10CQ8IV04 446 aa10.69□□□□□ -0.7
HDAC9-211ENST00000430454 CCDC144CPQ8IYA2 1237 aa10.69□□□□□ -0.7
HDAC9-211ENST00000430454 FAM133AQ8N9E0 248 aa10.69□□□□□ -0.7
HDAC9-211ENST00000430454 FERMT2Q96AC1 680 aa10.69□□□□□ -0.7
HDAC9-211ENST00000430454 VTI1AQ96AJ9 217 aa10.69□□□□□ -0.7
HDAC9-211ENST00000430454 CHMP4CQ96CF2 233 aa10.69□□□□□ -0.7
HDAC9-211ENST00000430454 GLT1D1Q96MS3 346 aa10.69□□□□□ -0.7
HDAC9-211ENST00000430454 ZSCAN10Q96SZ4 725 aaPredicted RBP10.69□□□□□ -0.7
HDAC9-211ENST00000430454 AP5M1Q9H0R1 490 aa10.69□□□□□ -0.7
HDAC9-211ENST00000430454 PRDM5Q9NQX1 630 aaPredicted RBP10.69□□□□□ -0.7
HDAC9-211ENST00000430454 TACC3Q9Y6A5 838 aa10.69□□□□□ -0.7
HDAC9-211ENST00000430454 ZNFX1Q9P2E3 1918 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms