RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 KLHDC9Q8NEP7 349 aa17.66■□□□□ 0.42
MSH5-208ENST00000429846 STAG1Q8WVM7 1258 aa17.66■□□□□ 0.42
MSH5-208ENST00000429846 EVI5LQ96CN4 794 aa17.66■□□□□ 0.42
MSH5-208ENST00000429846 SPC25Q9HBM1 224 aa17.66■□□□□ 0.42
MSH5-208ENST00000429846 ISY1Q9ULR0 285 aaKnown RBP17.66■□□□□ 0.42
MSH5-208ENST00000429846 STX8Q9UNK0 236 aa17.66■□□□□ 0.42
MSH5-208ENST00000429846 MROH7Q68CQ1 1323 aa17.66■□□□□ 0.42
MSH5-208ENST00000429846 KIAA0355O15063 1070 aa17.65■□□□□ 0.42
MSH5-208ENST00000429846 FOXP2O15409 715 aa17.65■□□□□ 0.42
MSH5-208ENST00000429846 PQBP1O60828 265 aaKnown RBP17.65■□□□□ 0.42
MSH5-208ENST00000429846 IKQ13123 557 aaPredicted RBP17.65■□□□□ 0.42
MSH5-208ENST00000429846 ARMCX2Q7L311 632 aa17.65■□□□□ 0.42
MSH5-208ENST00000429846 PCSK9Q8NBP7 692 aaKnown RBP17.65■□□□□ 0.42
MSH5-208ENST00000429846 FGD4Q96M96 766 aa17.65■□□□□ 0.42
MSH5-208ENST00000429846 ANAPC4Q9UJX5 808 aa17.65■□□□□ 0.42
MSH5-208ENST00000429846 ELP1O95163 1332 aa17.65■□□□□ 0.42
MSH5-208ENST00000429846 LRRC37A2A6NM11 1700 aa17.64■□□□□ 0.41
MSH5-208ENST00000429846 DCDC2CA8MYV0 355 aa17.64■□□□□ 0.41
MSH5-208ENST00000429846 RAG1P15918 1043 aa17.64■□□□□ 0.41
MSH5-208ENST00000429846 SMAD3P84022 425 aaKnown RBP17.64■□□□□ 0.41
MSH5-208ENST00000429846 KCNA10Q16322 511 aa17.64■□□□□ 0.41
MSH5-208ENST00000429846 C9orf50Q5SZB4 431 aa17.64■□□□□ 0.41
MSH5-208ENST00000429846 ANKRD45Q5TZF3 282 aa17.64■□□□□ 0.41
MSH5-208ENST00000429846 CCSAPQ6IQ19 270 aaPredicted RBP17.64■□□□□ 0.41
MSH5-208ENST00000429846 GLT1D1Q96MS3 346 aa17.64■□□□□ 0.41
MSH5-208ENST00000429846 UPF3AQ9H1J1 476 aaKnown RBP17.64■□□□□ 0.41
MSH5-208ENST00000429846 HELLSQ9NRZ9 838 aa17.64■□□□□ 0.41
MSH5-208ENST00000429846 HOMER2Q9NSB8 354 aa17.64■□□□□ 0.41
MSH5-208ENST00000429846 C6orf222P0C671 652 aaPredicted RBP17.63■□□□□ 0.41
MSH5-208ENST00000429846 MCCP23508 829 aa17.63■□□□□ 0.41
MSH5-208ENST00000429846 GJA9P57773 515 aa17.63■□□□□ 0.41
MSH5-208ENST00000429846 HDAC1Q13547 482 aaPredicted RBP17.63■□□□□ 0.41
MSH5-208ENST00000429846 CCDC144BQ3MJ40 725 aa17.63■□□□□ 0.41
MSH5-208ENST00000429846 RCSD1Q6JBY9 416 aa17.63■□□□□ 0.41
MSH5-208ENST00000429846 CCDC129Q6ZRS4 1044 aa17.63■□□□□ 0.41
MSH5-208ENST00000429846 CCDC144CPQ8IYA2 1237 aa17.63■□□□□ 0.41
MSH5-208ENST00000429846 FAM133AQ8N9E0 248 aa17.63■□□□□ 0.41
MSH5-208ENST00000429846 A1CFQ9NQ94 594 aaKnown RBP17.63■□□□□ 0.41
MSH5-208ENST00000429846 RNF146Q9NTX7 359 aa17.63■□□□□ 0.41
MSH5-208ENST00000429846 ZNF536O15090 1300 aa17.63■□□□□ 0.41
MSH5-208ENST00000429846 ASB14A6NK59 587 aa17.62■□□□□ 0.41
MSH5-208ENST00000429846 DLL1O00548 723 aa17.62■□□□□ 0.41
MSH5-208ENST00000429846 ORC4O43929 436 aa17.62■□□□□ 0.41
MSH5-208ENST00000429846 FGRP09769 529 aa17.62■□□□□ 0.41
MSH5-208ENST00000429846 NOVP48745 357 aa17.62■□□□□ 0.41
MSH5-208ENST00000429846 PDE1AP54750 535 aa17.62■□□□□ 0.41
MSH5-208ENST00000429846 FPGSQ05932 587 aa17.62■□□□□ 0.41
MSH5-208ENST00000429846 CTDSPL2Q05D32 466 aa17.62■□□□□ 0.41
MSH5-208ENST00000429846 ALX1Q15699 326 aa17.62■□□□□ 0.41
MSH5-208ENST00000429846 GUCD1Q96NT3 240 aa17.62■□□□□ 0.41
MSH5-208ENST00000429846 IL17RBQ9NRM6 502 aa17.62■□□□□ 0.41
MSH5-208ENST00000429846 TMEM39AQ9NV64 488 aa17.62■□□□□ 0.41
MSH5-208ENST00000429846 ZMYM6O95789 1325 aa17.62■□□□□ 0.41
MSH5-208ENST00000429846 MYADML2A6NDP7 307 aa17.61■□□□□ 0.41
MSH5-208ENST00000429846 ADCY6O43306 1168 aa17.61■□□□□ 0.41
MSH5-208ENST00000429846 RANBP6O60518 1105 aaKnown RBP17.61■□□□□ 0.41
MSH5-208ENST00000429846 ASGR1P07306 291 aa17.61■□□□□ 0.41
MSH5-208ENST00000429846 ITGB8P26012 769 aa17.61■□□□□ 0.41
MSH5-208ENST00000429846 NKX3-2P78367 333 aa17.61■□□□□ 0.41
MSH5-208ENST00000429846 CNTN2Q02246 1040 aa17.61■□□□□ 0.41
MSH5-208ENST00000429846 FAAP100Q0VG06 881 aa17.61■□□□□ 0.41
MSH5-208ENST00000429846 AAMPQ13685 434 aa17.61■□□□□ 0.41
MSH5-208ENST00000429846 KCTD1Q719H9 257 aa17.61■□□□□ 0.41
MSH5-208ENST00000429846 DCAF4Q8WV16 495 aa17.61■□□□□ 0.41
MSH5-208ENST00000429846 RNPC3Q96LT9 517 aaKnown RBP17.61■□□□□ 0.41
MSH5-208ENST00000429846 AGBL1Q96MI9 1066 aa17.61■□□□□ 0.41
MSH5-208ENST00000429846 TRERF1Q96PN7 1200 aa17.61■□□□□ 0.41
MSH5-208ENST00000429846 KATNBL1Q9H079 304 aa17.61■□□□□ 0.41
MSH5-208ENST00000429846 TMEM265A0A087WTH1 108 aa17.6■□□□□ 0.41
MSH5-208ENST00000429846 A0A0U1RQG5 324 aaPredicted RBP17.6■□□□□ 0.41
MSH5-208ENST00000429846 ALAS1P13196 640 aa17.6■□□□□ 0.41
MSH5-208ENST00000429846 MCMDC2Q4G0Z9 681 aa17.6■□□□□ 0.41
MSH5-208ENST00000429846 GNASQ5JWF2 1037 aa17.6■□□□□ 0.41
MSH5-208ENST00000429846 VPS53Q5VIR6 699 aa17.6■□□□□ 0.41
MSH5-208ENST00000429846 CRBNQ96SW2 442 aa17.6■□□□□ 0.41
MSH5-208ENST00000429846 TBX21Q9UL17 535 aa17.6■□□□□ 0.41
MSH5-208ENST00000429846 PRR12Q9ULL5 1215 aa17.6■□□□□ 0.41
MSH5-208ENST00000429846 LCTP09848 1927 aa17.6■□□□□ 0.41
MSH5-208ENST00000429846 NMT2O60551 498 aa17.59■□□□□ 0.41
MSH5-208ENST00000429846 CDK7P50613 346 aa17.59■□□□□ 0.41
MSH5-208ENST00000429846 FAM161BQ96MY7 647 aa17.59■□□□□ 0.41
MSH5-208ENST00000429846 CUL9Q8IWT3 2517 aa17.59■□□□□ 0.41
MSH5-208ENST00000429846 TIMP1P01033 207 aa17.58■□□□□ 0.4
MSH5-208ENST00000429846 ICAM1P05362 532 aa17.58■□□□□ 0.4
MSH5-208ENST00000429846 PCP11498 1178 aaKnown RBP17.58■□□□□ 0.4
MSH5-208ENST00000429846 TNFAIP2Q03169 654 aa17.58■□□□□ 0.4
MSH5-208ENST00000429846 CCDC96Q2M329 555 aa17.58■□□□□ 0.4
MSH5-208ENST00000429846 CCDC174Q6PII3 467 aa17.58■□□□□ 0.4
MSH5-208ENST00000429846 RANBP17Q9H2T7 1088 aaKnown RBP17.58■□□□□ 0.4
MSH5-208ENST00000429846 INCENPQ9NQS7 918 aa17.58■□□□□ 0.4
MSH5-208ENST00000429846 TOMM22Q9NS69 142 aa17.58■□□□□ 0.4
MSH5-208ENST00000429846 TCP11L1Q9NUJ3 509 aa17.58■□□□□ 0.4
MSH5-208ENST00000429846 CYP39A1Q9NYL5 469 aa17.58■□□□□ 0.4
MSH5-208ENST00000429846 CCPG1Q9ULG6 757 aa17.58■□□□□ 0.4
MSH5-208ENST00000429846 LAMA2P24043 3122 aaKnown RBP17.57■□□□□ 0.4
MSH5-208ENST00000429846 LOC102724159A0A0B4J2E5 919 aa17.57■□□□□ 0.4
MSH5-208ENST00000429846 A0A0D9SFI3 127 aa17.57■□□□□ 0.4
MSH5-208ENST00000429846 SOWAHBA6NEL2 793 aa17.57■□□□□ 0.4
MSH5-208ENST00000429846 ARVCFO00192 962 aa17.57■□□□□ 0.4
MSH5-208ENST00000429846 TLR3O15455 904 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms