RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 RGPD4Q7Z3J3 1758 aa18.37■□□□□ 0.53
MBD4-203ENST00000429544 NRDCO43847 1150 aa18.36■□□□□ 0.53
MBD4-203ENST00000429544 CCNT1O60563 726 aaKnown RBP18.36■□□□□ 0.53
MBD4-203ENST00000429544 SNHG28P0DPA3 235 aa18.36■□□□□ 0.53
MBD4-203ENST00000429544 RBM5P52756 815 aaKnown RBP eCLIP18.36■□□□□ 0.53
MBD4-203ENST00000429544 SPATA1Q5VX52 437 aa18.36■□□□□ 0.53
MBD4-203ENST00000429544 JAKMIP3Q5VZ66 844 aa18.36■□□□□ 0.53
MBD4-203ENST00000429544 COA7Q96BR5 231 aa18.36■□□□□ 0.53
MBD4-203ENST00000429544 TMEM260Q9NX78 707 aa18.36■□□□□ 0.53
MBD4-203ENST00000429544 LAD1O00515 517 aa18.35■□□□□ 0.53
MBD4-203ENST00000429544 TCP10Q12799 353 aa18.35■□□□□ 0.53
MBD4-203ENST00000429544 DACT2Q5SW24 774 aa18.35■□□□□ 0.53
MBD4-203ENST00000429544 STRIP1Q5VSL9 837 aa18.35■□□□□ 0.53
MBD4-203ENST00000429544 REXO1Q8N1G1 1221 aaKnown RBP18.35■□□□□ 0.53
MBD4-203ENST00000429544 ESYT2A0FGR8 921 aa18.35■□□□□ 0.53
MBD4-203ENST00000429544 GTF2F1P35269 517 aaKnown RBP eCLIP18.35■□□□□ 0.53
MBD4-203ENST00000429544 PRPHP41219 470 aa18.35■□□□□ 0.53
MBD4-203ENST00000429544 RRAGBQ5VZM2 374 aa18.35■□□□□ 0.53
MBD4-203ENST00000429544 NEK8Q86SG6 692 aa18.35■□□□□ 0.53
MBD4-203ENST00000429544 TSC1Q92574 1164 aa18.35■□□□□ 0.53
MBD4-203ENST00000429544 PLIN2Q99541 437 aa18.35■□□□□ 0.53
MBD4-203ENST00000429544 C10orf71Q711Q0 1435 aa18.35■□□□□ 0.53
MBD4-203ENST00000429544 OR52Z1P0C646 297 aa18.34■□□□□ 0.53
MBD4-203ENST00000429544 UBA7P41226 1012 aa18.34■□□□□ 0.53
MBD4-203ENST00000429544 ZNF543Q08ER8 600 aa18.34■□□□□ 0.53
MBD4-203ENST00000429544 CEP135Q66GS9 1140 aa18.34■□□□□ 0.53
MBD4-203ENST00000429544 TBCKQ8TEA7 893 aa18.34■□□□□ 0.53
MBD4-203ENST00000429544 DNAJC18Q9H819 358 aa18.34■□□□□ 0.53
MBD4-203ENST00000429544 KCND1Q9NSA2 647 aa18.34■□□□□ 0.53
MBD4-203ENST00000429544 FAM196BA6NMK8 535 aa18.34■□□□□ 0.53
MBD4-203ENST00000429544 hCG_1984214I3L0E3 225 aa18.34■□□□□ 0.53
MBD4-203ENST00000429544 RPN1P04843 607 aaKnown RBP18.34■□□□□ 0.53
MBD4-203ENST00000429544 PTPN14Q15678 1187 aa18.34■□□□□ 0.53
MBD4-203ENST00000429544 CCDC96Q2M329 555 aa18.34■□□□□ 0.53
MBD4-203ENST00000429544 NAALADL2Q58DX5 795 aa18.34■□□□□ 0.53
MBD4-203ENST00000429544 E4F1Q66K89 784 aaPredicted RBP18.34■□□□□ 0.53
MBD4-203ENST00000429544 NYAP1Q6ZVC0 841 aa18.34■□□□□ 0.53
MBD4-203ENST00000429544 ZNF713Q8N859 430 aaPredicted RBP18.34■□□□□ 0.53
MBD4-203ENST00000429544 ZNF592Q92610 1267 aa18.34■□□□□ 0.53
MBD4-203ENST00000429544 EHD4Q9H223 541 aa18.34■□□□□ 0.53
MBD4-203ENST00000429544 COBLO75128 1261 aa18.33■□□□□ 0.53
MBD4-203ENST00000429544 ADCY7P51828 1080 aa18.33■□□□□ 0.53
MBD4-203ENST00000429544 AOC3Q16853 763 aa18.33■□□□□ 0.53
MBD4-203ENST00000429544 TTBK2Q6IQ55 1244 aa18.33■□□□□ 0.53
MBD4-203ENST00000429544 FKBP1AP62942 108 aaKnown RBP18.33■□□□□ 0.52
MBD4-203ENST00000429544 ADGRF4Q8IZF3 695 aa18.33■□□□□ 0.52
MBD4-203ENST00000429544 CCSER1Q9C0I3 900 aa18.33■□□□□ 0.52
MBD4-203ENST00000429544 JMJD4Q9H9V9 463 aa18.33■□□□□ 0.52
MBD4-203ENST00000429544 TBX2Q13207 712 aaPredicted RBP18.32■□□□□ 0.52
MBD4-203ENST00000429544 CNKSR1Q969H4 720 aa18.32■□□□□ 0.52
MBD4-203ENST00000429544 RMND1Q9NWS8 449 aa18.32■□□□□ 0.52
MBD4-203ENST00000429544 FAM198AQ9UFP1 575 aa18.32■□□□□ 0.52
MBD4-203ENST00000429544 DDTLA6NHG4 134 aaPredicted RBP18.32■□□□□ 0.52
MBD4-203ENST00000429544 SLC16A2P36021 539 aa18.32■□□□□ 0.52
MBD4-203ENST00000429544 KCNJ6P48051 423 aa18.32■□□□□ 0.52
MBD4-203ENST00000429544 SHROOM1Q2M3G4 852 aaPredicted RBP18.32■□□□□ 0.52
MBD4-203ENST00000429544 CDKAL1Q5VV42 579 aa18.32■□□□□ 0.52
MBD4-203ENST00000429544 SPECC1LQ69YQ0 1117 aa18.32■□□□□ 0.52
MBD4-203ENST00000429544 KCTD1Q719H9 257 aa18.32■□□□□ 0.52
MBD4-203ENST00000429544 CABP7Q86V35 215 aa18.32■□□□□ 0.52
MBD4-203ENST00000429544 ZSCAN29Q8IWY8 852 aaPredicted RBP18.32■□□□□ 0.52
MBD4-203ENST00000429544 CCDC112Q8NEF3 446 aa18.32■□□□□ 0.52
MBD4-203ENST00000429544 A0A1B0GTH6 734 aa18.31■□□□□ 0.52
MBD4-203ENST00000429544 SLC15A2Q16348 729 aa18.31■□□□□ 0.52
MBD4-203ENST00000429544 ZNF658Q5TYW1 1059 aaPredicted RBP18.31■□□□□ 0.52
MBD4-203ENST00000429544 APTXQ7Z2E3 356 aaKnown RBP18.31■□□□□ 0.52
MBD4-203ENST00000429544 POTEDQ86YR6 584 aa18.31■□□□□ 0.52
MBD4-203ENST00000429544 PPP1R13BQ96KQ4 1090 aa18.31■□□□□ 0.52
MBD4-203ENST00000429544 CCDC17Q96LX7 622 aa18.31■□□□□ 0.52
MBD4-203ENST00000429544 GDAQ9Y2T3 454 aa18.31■□□□□ 0.52
MBD4-203ENST00000429544 PNMA6FA0A0J9YX94 578 aa18.31■□□□□ 0.52
MBD4-203ENST00000429544 NR1I3Q14994 352 aa18.31■□□□□ 0.52
MBD4-203ENST00000429544 EZH2Q15910 746 aaKnown RBP18.31■□□□□ 0.52
MBD4-203ENST00000429544 LRRC15Q8TF66 581 aa18.31■□□□□ 0.52
MBD4-203ENST00000429544 MRIQ9BWK5 157 aa18.31■□□□□ 0.52
MBD4-203ENST00000429544 PSDA5PKW4 1024 aaPredicted RBP18.3■□□□□ 0.52
MBD4-203ENST00000429544 RAD21O60216 631 aa18.3■□□□□ 0.52
MBD4-203ENST00000429544 PPP1R11O60927 126 aaPredicted RBP18.3■□□□□ 0.52
MBD4-203ENST00000429544 PLCG1P19174 1290 aa18.3■□□□□ 0.52
MBD4-203ENST00000429544 HDLBPQ00341 1268 aaKnown RBP18.3■□□□□ 0.52
MBD4-203ENST00000429544 PAK1Q13153 545 aa18.3■□□□□ 0.52
MBD4-203ENST00000429544 SH3BP5LQ7L8J4 393 aa18.3■□□□□ 0.52
MBD4-203ENST00000429544 AK8Q96MA6 479 aa18.3■□□□□ 0.52
MBD4-203ENST00000429544 DHX36Q9H2U1 1008 aaKnown RBP18.3■□□□□ 0.52
MBD4-203ENST00000429544 TMX1Q9H3N1 280 aa18.3■□□□□ 0.52
MBD4-203ENST00000429544 PAXBP1Q9Y5B6 917 aa18.3■□□□□ 0.52
MBD4-203ENST00000429544 TEX33O43247 280 aa18.3■□□□□ 0.52
MBD4-203ENST00000429544 TECP42680 631 aa18.3■□□□□ 0.52
MBD4-203ENST00000429544 GPATCH4Q5T3I0 446 aaKnown RBP18.3■□□□□ 0.52
MBD4-203ENST00000429544 NELFBQ8WX92 580 aa18.3■□□□□ 0.52
MBD4-203ENST00000429544 IDI2Q9BXS1 227 aa18.3■□□□□ 0.52
MBD4-203ENST00000429544 RWDD2AQ9UIY3 292 aa18.3■□□□□ 0.52
MBD4-203ENST00000429544 USP17L10C9JJH3 530 aa18.29■□□□□ 0.52
MBD4-203ENST00000429544 UBE2SQ16763 222 aa18.29■□□□□ 0.52
MBD4-203ENST00000429544 CERKLQ49MI3 558 aaPredicted RBP18.29■□□□□ 0.52
MBD4-203ENST00000429544 C7orf43Q8WVR3 580 aa18.29■□□□□ 0.52
MBD4-203ENST00000429544 TRIM34Q9BYJ4 488 aa18.29■□□□□ 0.52
MBD4-203ENST00000429544 PI4KBQ9UBF8 816 aa18.29■□□□□ 0.52
MBD4-203ENST00000429544 MAPK8IP1Q9UQF2 711 aa18.29■□□□□ 0.52
MBD4-203ENST00000429544 EN1Q05925 392 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms