RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 ZNF652Q9Y2D9 606 aa15.32■□□□□ 0.04
SGMS1-203ENST00000429490 XRN1Q8IZH2 1706 aaKnown RBP15.32■□□□□ 0.04
SGMS1-203ENST00000429490 WDR19Q8NEZ3 1342 aa15.31■□□□□ 0.04
SGMS1-203ENST00000429490 STK36Q9NRP7 1315 aa15.31■□□□□ 0.04
SGMS1-203ENST00000429490 RASSF7Q02833 373 aa15.31■□□□□ 0.04
SGMS1-203ENST00000429490 LRRC41Q15345 812 aa15.31■□□□□ 0.04
SGMS1-203ENST00000429490 SELENOOQ9BVL4 669 aa15.31■□□□□ 0.04
SGMS1-203ENST00000429490 L1RE1Q9UN81 338 aa15.31■□□□□ 0.04
SGMS1-203ENST00000429490 CACNA1FO60840 1977 aa15.31■□□□□ 0.04
SGMS1-203ENST00000429490 USP8P40818 1118 aa15.31■□□□□ 0.04
SGMS1-203ENST00000429490 KLK7P49862 253 aa15.31■□□□□ 0.04
SGMS1-203ENST00000429490 TBX2Q13207 712 aaPredicted RBP15.31■□□□□ 0.04
SGMS1-203ENST00000429490 CAPS2Q9BXY5 557 aa15.31■□□□□ 0.04
SGMS1-203ENST00000429490 TRIM31Q9BZY9 425 aa15.31■□□□□ 0.04
SGMS1-203ENST00000429490 MLXIPQ9HAP2 919 aa15.31■□□□□ 0.04
SGMS1-203ENST00000429490 ESYT3A0FGR9 886 aa15.31■□□□□ 0.04
SGMS1-203ENST00000429490 CEP89Q96ST8 783 aa15.31■□□□□ 0.04
SGMS1-203ENST00000429490 BIN2Q9UBW5 565 aaPredicted RBP15.31■□□□□ 0.04
SGMS1-203ENST00000429490 MEGF6O75095 1541 aa15.31■□□□□ 0.04
SGMS1-203ENST00000429490 PPP1R3GB7ZBB8 358 aa15.3■□□□□ 0.04
SGMS1-203ENST00000429490 DPYDQ12882 1025 aa15.3■□□□□ 0.04
SGMS1-203ENST00000429490 GOLGA6L7A0A1B0GV03 622 aa15.3■□□□□ 0.04
SGMS1-203ENST00000429490 PRPF3O43395 683 aaKnown RBP15.3■□□□□ 0.04
SGMS1-203ENST00000429490 FGFR1OPO95684 399 aaKnown RBP15.3■□□□□ 0.04
SGMS1-203ENST00000429490 DYNLL2Q96FJ2 89 aa15.3■□□□□ 0.04
SGMS1-203ENST00000429490 FAM208AQ9UK61 1670 aaKnown RBP15.3■□□□□ 0.04
SGMS1-203ENST00000429490 NCK2O43639 380 aa15.3■□□□□ 0.04
SGMS1-203ENST00000429490 PPP2R5BQ15173 497 aa15.3■□□□□ 0.04
SGMS1-203ENST00000429490 SV2BQ7L1I2 683 aa15.3■□□□□ 0.04
SGMS1-203ENST00000429490 CEP57Q86XR8 500 aa15.3■□□□□ 0.04
SGMS1-203ENST00000429490 PPANQ9NQ55 473 aaKnown RBP15.3■□□□□ 0.04
SGMS1-203ENST00000429490 KCND1Q9NSA2 647 aa15.3■□□□□ 0.04
SGMS1-203ENST00000429490 MYO1AQ9UBC5 1043 aa15.3■□□□□ 0.04
SGMS1-203ENST00000429490 TMEM94Q12767 1356 aa15.3■□□□□ 0.04
SGMS1-203ENST00000429490 WDR17Q8IZU2 1322 aa15.29■□□□□ 0.04
SGMS1-203ENST00000429490 F8W031 263 aaPredicted RBP15.29■□□□□ 0.04
SGMS1-203ENST00000429490 GUCY2DQ02846 1103 aa15.29■□□□□ 0.04
SGMS1-203ENST00000429490 LRP10Q7Z4F1 713 aa15.29■□□□□ 0.04
SGMS1-203ENST00000429490 MAPKAPK5Q8IW41 473 aa15.29■□□□□ 0.04
SGMS1-203ENST00000429490 JCADQ9P266 1359 aa15.29■□□□□ 0.04
SGMS1-203ENST00000429490 SLIT1O75093 1534 aa15.29■□□□□ 0.04
SGMS1-203ENST00000429490 TLDC2A0PJX2 215 aa15.29■□□□□ 0.04
SGMS1-203ENST00000429490 USP17L8P0C7I0 530 aa15.29■□□□□ 0.04
SGMS1-203ENST00000429490 PDCLQ13371 301 aa15.29■□□□□ 0.04
SGMS1-203ENST00000429490 SRBD1Q8N5C6 995 aaKnown RBP15.29■□□□□ 0.04
SGMS1-203ENST00000429490 RAB34Q9BZG1 259 aa15.29■□□□□ 0.04
SGMS1-203ENST00000429490 KANSL2Q9H9L4 492 aa15.29■□□□□ 0.04
SGMS1-203ENST00000429490 JRKLQ9Y4A0 524 aa15.29■□□□□ 0.04
SGMS1-203ENST00000429490 CAPN7Q9Y6W3 813 aa15.29■□□□□ 0.04
SGMS1-203ENST00000429490 CSF1RP07333 972 aa15.29■□□□□ 0.04
SGMS1-203ENST00000429490 MDM2Q00987 491 aaPredicted RBP15.29■□□□□ 0.04
SGMS1-203ENST00000429490 EHD2Q9NZN4 543 aa15.29■□□□□ 0.04
SGMS1-203ENST00000429490 PLCG1P19174 1290 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 USP14P54578 494 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 PICALMQ13492 652 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 TMTC3Q6ZXV5 915 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 TRIM58Q8NG06 486 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 NUP58Q9BVL2 599 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 DISC1Q9NRI5 854 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 USP17L3A6NCW0 530 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 USP17L4A6NCW7 530 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 RNF225M0QZC1 329 aaPredicted RBP15.28■□□□□ 0.04
SGMS1-203ENST00000429490 WNT7AO00755 349 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 FTCDO95954 541 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 EIF4A3P38919 411 aaKnown RBP15.28■□□□□ 0.04
SGMS1-203ENST00000429490 GNAQP50148 359 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 KRT79Q5XKE5 535 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 NFRKBQ6P4R8 1299 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 USP17L1Q7RTZ2 530 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 NBPF5PQ86XG9 351 aaPredicted RBP15.28■□□□□ 0.04
SGMS1-203ENST00000429490 TGFBRAP1Q8WUH2 860 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 C6orf50Q9HD87 102 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 AKAP12Q02952 1782 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 HIBADHP31937 336 aaKnown RBP15.28■□□□□ 0.04
SGMS1-203ENST00000429490 EHHADHQ08426 723 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 PPFIA1Q13136 1202 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 SMIM5Q71RC9 77 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 NOX5Q96PH1 765 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 LACRTQ9GZZ8 138 aa15.28■□□□□ 0.04
SGMS1-203ENST00000429490 XDHP47989 1333 aa15.27■□□□□ 0.04
SGMS1-203ENST00000429490 RGPD8O14715 1765 aaPredicted RBP15.27■□□□□ 0.04
SGMS1-203ENST00000429490 LGALS16A8MUM7 142 aa15.27■□□□□ 0.04
SGMS1-203ENST00000429490 PPFIA4O75335 1185 aa15.27■□□□□ 0.04
SGMS1-203ENST00000429490 ALX1Q15699 326 aa15.27■□□□□ 0.04
SGMS1-203ENST00000429490 UBLCP1Q8WVY7 318 aaPredicted RBP15.27■□□□□ 0.04
SGMS1-203ENST00000429490 CCDC43Q96MW1 224 aaKnown RBP15.27■□□□□ 0.04
SGMS1-203ENST00000429490 NRXN3Q9Y4C0 1643 aa15.27■□□□□ 0.03
SGMS1-203ENST00000429490 SMCO2A6NFE2 343 aa15.27■□□□□ 0.03
SGMS1-203ENST00000429490 FCER1AP12319 257 aa15.27■□□□□ 0.03
SGMS1-203ENST00000429490 LONP1P36776 959 aaKnown RBP15.27■□□□□ 0.03
SGMS1-203ENST00000429490 CACNB1Q02641 598 aaPredicted RBP15.27■□□□□ 0.03
SGMS1-203ENST00000429490 CNNM4Q6P4Q7 775 aa15.27■□□□□ 0.03
SGMS1-203ENST00000429490 SNX29Q8TEQ0 813 aa15.27■□□□□ 0.03
SGMS1-203ENST00000429490 P2RX5Q93086 422 aa15.27■□□□□ 0.03
SGMS1-203ENST00000429490 TSGA10Q9BZW7 698 aa15.27■□□□□ 0.03
SGMS1-203ENST00000429490 GPCPD1Q9NPB8 672 aa15.27■□□□□ 0.03
SGMS1-203ENST00000429490 PIK3C2AO00443 1686 aa15.27■□□□□ 0.03
SGMS1-203ENST00000429490 WTIPA6NIX2 430 aaPredicted RBP15.26■□□□□ 0.03
SGMS1-203ENST00000429490 VEGFAP15692 232 aaPredicted RBP15.26■□□□□ 0.03
SGMS1-203ENST00000429490 SARSP49591 514 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms