RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 DDX11L8A8MPP1 907 aa10.21□□□□□ -0.77
SMC6-204ENST00000428868 WDR46O15213 610 aaKnown RBP10.21□□□□□ -0.77
SMC6-204ENST00000428868 PDIA4P13667 645 aaKnown RBP10.21□□□□□ -0.77
SMC6-204ENST00000428868 NF2P35240 595 aa10.21□□□□□ -0.77
SMC6-204ENST00000428868 STAT2P52630 851 aa10.21□□□□□ -0.77
SMC6-204ENST00000428868 KRT85P78386 507 aa10.21□□□□□ -0.77
SMC6-204ENST00000428868 UBE2SQ16763 222 aa10.21□□□□□ -0.77
SMC6-204ENST00000428868 USH1GQ495M9 461 aa10.21□□□□□ -0.77
SMC6-204ENST00000428868 CCDC174Q6PII3 467 aa10.21□□□□□ -0.77
SMC6-204ENST00000428868 BRAPQ7Z569 592 aa10.21□□□□□ -0.77
SMC6-204ENST00000428868 BLIDQ8IZY5 108 aa10.21□□□□□ -0.77
SMC6-204ENST00000428868 TMEM87AQ8NBN3 555 aa10.21□□□□□ -0.77
SMC6-204ENST00000428868 GPT2Q8TD30 523 aa10.21□□□□□ -0.77
SMC6-204ENST00000428868 LEO1Q8WVC0 666 aaPredicted RBP10.21□□□□□ -0.77
SMC6-204ENST00000428868 OTUD5Q96G74 571 aa10.21□□□□□ -0.77
SMC6-204ENST00000428868 PGBD1Q96JS3 809 aa10.21□□□□□ -0.77
SMC6-204ENST00000428868 RANBP17Q9H2T7 1088 aaKnown RBP10.21□□□□□ -0.77
SMC6-204ENST00000428868 FOXP1Q9H334 677 aaPredicted RBP10.21□□□□□ -0.77
SMC6-204ENST00000428868 RPAP3Q9H6T3 665 aaPredicted RBP10.21□□□□□ -0.77
SMC6-204ENST00000428868 AS3MTQ9HBK9 375 aa10.21□□□□□ -0.77
SMC6-204ENST00000428868 SH3GLB2Q9NR46 395 aa10.21□□□□□ -0.77
SMC6-204ENST00000428868 TMEM260Q9NX78 707 aa10.21□□□□□ -0.77
SMC6-204ENST00000428868 PCDHA4Q9UN74 947 aa10.21□□□□□ -0.77
SMC6-204ENST00000428868 CSADQ9Y600 493 aa10.21□□□□□ -0.77
SMC6-204ENST00000428868 SMCO2A6NFE2 343 aa10.2□□□□□ -0.78
SMC6-204ENST00000428868 OPLAHO14841 1288 aa10.2□□□□□ -0.78
SMC6-204ENST00000428868 ZNF536O15090 1300 aa10.2□□□□□ -0.78
SMC6-204ENST00000428868 XBP1P17861 261 aa10.2□□□□□ -0.78
SMC6-204ENST00000428868 ATP2B1P20020 1258 aa10.2□□□□□ -0.78
SMC6-204ENST00000428868 GNL2Q13823 731 aaKnown RBP10.2□□□□□ -0.78
SMC6-204ENST00000428868 SAFBQ15424 915 aaKnown RBP eCLIP10.2□□□□□ -0.78
SMC6-204ENST00000428868 TREML2Q5T2D2 321 aa10.2□□□□□ -0.78
SMC6-204ENST00000428868 LDLRAD1Q5T700 205 aa10.2□□□□□ -0.78
SMC6-204ENST00000428868 ANKRD13AQ8IZ07 590 aa10.2□□□□□ -0.78
SMC6-204ENST00000428868 DAGLBQ8NCG7 672 aa10.2□□□□□ -0.78
SMC6-204ENST00000428868 CCDC148Q8NFR7 591 aa10.2□□□□□ -0.78
SMC6-204ENST00000428868 LPAR1Q92633 364 aa10.2□□□□□ -0.78
SMC6-204ENST00000428868 C12orf42Q96LP6 360 aa10.2□□□□□ -0.78
SMC6-204ENST00000428868 P2RX7Q99572 595 aaKnown RBP10.2□□□□□ -0.78
SMC6-204ENST00000428868 TANGO6Q9C0B7 1094 aa10.2□□□□□ -0.78
SMC6-204ENST00000428868 ZMYND12Q9H0C1 365 aa10.2□□□□□ -0.78
SMC6-204ENST00000428868 PCDHA6Q9UN73 950 aa10.2□□□□□ -0.78
SMC6-204ENST00000428868 PCDHA8Q9Y5H6 950 aa10.2□□□□□ -0.78
SMC6-204ENST00000428868 ATP6V1DQ9Y5K8 247 aa10.2□□□□□ -0.78
SMC6-204ENST00000428868 MRVI1Q9Y6F6 885 aa10.2□□□□□ -0.78
SMC6-204ENST00000428868 MGAMO43451 1857 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 ZSWIM8A7E2V4 1837 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 ESYT2A0FGR8 921 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 SPDYE5A6NIY4 337 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 IRF6O14896 467 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 PEX10O60683 326 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 PLA2G6O60733 806 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 ITGBL1O95965 494 aaPredicted RBP10.19□□□□□ -0.78
SMC6-204ENST00000428868 USP14P54578 494 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 MOGSQ13724 837 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 PTPAQ15257 358 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 SH3D19Q5HYK7 790 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 JAKMIP3Q5VZ66 844 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 POTEEQ6S8J3 1075 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 PIK3AP1Q6ZUJ8 805 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 FAM160B2Q86V87 743 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 FBXO11Q86XK2 927 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 RBM46Q8TBY0 533 aaKnown RBP10.19□□□□□ -0.78
SMC6-204ENST00000428868 OPTNQ96CV9 577 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 ATG4CQ96DT6 458 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 SPATA32Q96LK8 384 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 ZNF396Q96N95 335 aaPredicted RBP10.19□□□□□ -0.78
SMC6-204ENST00000428868 SLF1Q9BQI6 1058 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 RTEL1Q9NZ71 1219 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 BIN2Q9UBW5 565 aaPredicted RBP10.19□□□□□ -0.78
SMC6-204ENST00000428868 FEM1BQ9UK73 627 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 PCDHB6Q9Y5E3 794 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 PCDHA1Q9Y5I3 950 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 DOCK3Q8IZD9 2030 aa10.19□□□□□ -0.78
SMC6-204ENST00000428868 USP17L15C9J2P7 530 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 USP17L13C9JLJ4 530 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 USP17L11C9JVI0 530 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 USP17L18D6R9N7 530 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 USP17L22D6RA61 530 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 USP17L17D6RBQ6 530 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 USP17L19D6RCP7 530 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 USP17L20D6RJB6 530 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 hCG_1984214I3L0E3 225 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 EDIL3O43854 480 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 TRAK2O60296 914 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 FLOT1O75955 427 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 CELF2O95319 508 aaKnown RBP10.18□□□□□ -0.78
SMC6-204ENST00000428868 CALML3P27482 149 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 NASPP49321 788 aaPredicted RBP10.18□□□□□ -0.78
SMC6-204ENST00000428868 CLK2P49760 499 aaKnown RBP10.18□□□□□ -0.78
SMC6-204ENST00000428868 ADCY7P51828 1080 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 PPATQ06203 517 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 USP17L24Q0WX57 530 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 MKRN3Q13064 507 aaKnown RBP10.18□□□□□ -0.78
SMC6-204ENST00000428868 PPIL2Q13356 520 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 SF3A1Q15459 793 aaKnown RBP10.18□□□□□ -0.78
SMC6-204ENST00000428868 CST9Q5W186 159 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 ANO1Q5XXA6 986 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 CHADLQ6NUI6 762 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 PPP1R18Q6NYC8 613 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms