RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 CUL5Q93034 780 aa10.38□□□□□ -0.75
NR1I3-209ENST00000428574 FERMT2Q96AC1 680 aa10.38□□□□□ -0.75
NR1I3-209ENST00000428574 UBA5Q9GZZ9 404 aa10.38□□□□□ -0.75
NR1I3-209ENST00000428574 MAP3K20Q9NYL2 800 aaKnown RBP10.38□□□□□ -0.75
NR1I3-209ENST00000428574 TFIP11Q9UBB9 837 aaKnown RBP10.38□□□□□ -0.75
NR1I3-209ENST00000428574 CSADQ9Y600 493 aa10.38□□□□□ -0.75
NR1I3-209ENST00000428574 hCG_1642624A0A1W2PR95 340 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 SMCO2A6NFE2 343 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 PIK3CDO00329 1044 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 CUTAO60888 179 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 USP2O75604 605 aaPredicted RBP10.37□□□□□ -0.75
NR1I3-209ENST00000428574 FOSP01100 380 aaPredicted RBP10.37□□□□□ -0.75
NR1I3-209ENST00000428574 VEGFAP15692 232 aaPredicted RBP10.37□□□□□ -0.75
NR1I3-209ENST00000428574 GCFC2P16383 781 aaKnown RBP10.37□□□□□ -0.75
NR1I3-209ENST00000428574 INPP5BP32019 993 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 PRPHP41219 470 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 ME1P48163 572 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 CLK2P49760 499 aaKnown RBP10.37□□□□□ -0.75
NR1I3-209ENST00000428574 OAZ1P54368 228 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 ZNF445P59923 1031 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 GHRHRQ02643 423 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 IKQ13123 557 aaPredicted RBP10.37□□□□□ -0.75
NR1I3-209ENST00000428574 NONOQ15233 471 aaKnown RBP eCLIP10.37□□□□□ -0.75
NR1I3-209ENST00000428574 SF3A1Q15459 793 aaKnown RBP10.37□□□□□ -0.75
NR1I3-209ENST00000428574 QRICH1Q2TAL8 776 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 CCDC183Q5T5S1 534 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 TTBK2Q6IQ55 1244 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 TYW1BQ6NUM6 668 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 CCDC73Q6ZRK6 1079 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 RASGRP2Q7LDG7 609 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 FBXO11Q86XK2 927 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 HOMER1Q86YM7 354 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 ANKRD13AQ8IZ07 590 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 KRI1Q8N9T8 703 aaKnown RBP10.37□□□□□ -0.75
NR1I3-209ENST00000428574 OXER1Q8TDS5 423 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 GDPD2Q9HCC8 539 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 PRR12Q9ULL5 1215 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 PCDHA6Q9UN73 950 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 MTMR7Q9Y216 660 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 PCDHA8Q9Y5H6 950 aa10.37□□□□□ -0.75
NR1I3-209ENST00000428574 ABCB11O95342 1321 aa10.36□□□□□ -0.75
NR1I3-209ENST00000428574 POTECB2RU33 542 aa10.36□□□□□ -0.75
NR1I3-209ENST00000428574 CTAGE5O15320 804 aa10.36□□□□□ -0.75
NR1I3-209ENST00000428574 PTPREP23469 700 aa10.36□□□□□ -0.75
NR1I3-209ENST00000428574 CMA1P23946 247 aa10.36□□□□□ -0.75
NR1I3-209ENST00000428574 TOB1P50616 345 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-209ENST00000428574 ATP2C1P98194 919 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-209ENST00000428574 FAM160A1Q05DH4 1040 aa10.36□□□□□ -0.75
NR1I3-209ENST00000428574 PPATQ06203 517 aa10.36□□□□□ -0.75
NR1I3-209ENST00000428574 FOXD4L6Q3SYB3 417 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-209ENST00000428574 TTC38Q5R3I4 469 aa10.36□□□□□ -0.75
NR1I3-209ENST00000428574 FAM83BQ5T0W9 1011 aa10.36□□□□□ -0.75
NR1I3-209ENST00000428574 MOXD1Q6UVY6 613 aa10.36□□□□□ -0.75
NR1I3-209ENST00000428574 FOXD4L3Q6VB84 417 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-209ENST00000428574 ARMC9Q7Z3E5 817 aa10.36□□□□□ -0.75
NR1I3-209ENST00000428574 ELOA2Q8IYF1 753 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-209ENST00000428574 PROCA1Q8NCQ7 364 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-209ENST00000428574 MRPS27Q92552 414 aaKnown RBP10.36□□□□□ -0.75
NR1I3-209ENST00000428574 CDCA5Q96FF9 252 aa10.36□□□□□ -0.75
NR1I3-209ENST00000428574 SLF1Q9BQI6 1058 aa10.36□□□□□ -0.75
NR1I3-209ENST00000428574 PYM1Q9BRP8 204 aaKnown RBP10.36□□□□□ -0.75
NR1I3-209ENST00000428574 PSTPIP2Q9H939 334 aa10.36□□□□□ -0.75
NR1I3-209ENST00000428574 AFG3L2Q9Y4W6 797 aa10.36□□□□□ -0.75
NR1I3-209ENST00000428574 PCDHA1Q9Y5I3 950 aa10.36□□□□□ -0.75
NR1I3-209ENST00000428574 SRPRBQ9Y5M8 271 aaKnown RBP10.36□□□□□ -0.75
NR1I3-209ENST00000428574 CLIC4Q9Y696 253 aa10.36□□□□□ -0.75
NR1I3-209ENST00000428574 SNCAIPQ9Y6H5 919 aa10.36□□□□□ -0.75
NR1I3-209ENST00000428574 SPDYE5A6NIY4 337 aa10.35□□□□□ -0.75
NR1I3-209ENST00000428574 CXCL11O14625 94 aa10.35□□□□□ -0.75
NR1I3-209ENST00000428574 ATP2A1O14983 1001 aa10.35□□□□□ -0.75
NR1I3-209ENST00000428574 RAD21O60216 631 aa10.35□□□□□ -0.75
NR1I3-209ENST00000428574 PPP1R11O60927 126 aaPredicted RBP10.35□□□□□ -0.75
NR1I3-209ENST00000428574 GADD45BO75293 160 aaPredicted RBP10.35□□□□□ -0.75
NR1I3-209ENST00000428574 VCAM1P19320 739 aa10.35□□□□□ -0.75
NR1I3-209ENST00000428574 SLC16A2P36021 539 aa10.35□□□□□ -0.75
NR1I3-209ENST00000428574 MTMR2Q13614 643 aa10.35□□□□□ -0.75
NR1I3-209ENST00000428574 VGLL4Q14135 290 aa10.35□□□□□ -0.75
NR1I3-209ENST00000428574 GSE1Q14687 1217 aa10.35□□□□□ -0.75
NR1I3-209ENST00000428574 AXDND1Q5T1B0 1012 aaPredicted RBP10.35□□□□□ -0.75
NR1I3-209ENST00000428574 PPP4R3AQ6IN85 833 aa10.35□□□□□ -0.75
NR1I3-209ENST00000428574 CAVIN1Q6NZI2 390 aaKnown RBP10.35□□□□□ -0.75
NR1I3-209ENST00000428574 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.35□□□□□ -0.75
NR1I3-209ENST00000428574 NEK8Q86SG6 692 aa10.35□□□□□ -0.75
NR1I3-209ENST00000428574 LDHDQ86WU2 507 aa10.35□□□□□ -0.75
NR1I3-209ENST00000428574 ERO1BQ86YB8 467 aa10.35□□□□□ -0.75
NR1I3-209ENST00000428574 CHAMP1Q96JM3 812 aa10.35□□□□□ -0.75
NR1I3-209ENST00000428574 PGBD1Q96JS3 809 aa10.35□□□□□ -0.75
NR1I3-209ENST00000428574 TIGD1Q96MW7 591 aa10.35□□□□□ -0.75
NR1I3-209ENST00000428574 VAT1LQ9HCJ6 419 aa10.35□□□□□ -0.75
NR1I3-209ENST00000428574 TMOD4Q9NZQ9 345 aa10.35□□□□□ -0.75
NR1I3-209ENST00000428574 PPP1R9AQ9ULJ8 1098 aa10.35□□□□□ -0.75
NR1I3-209ENST00000428574 PCDHA7Q9UN72 937 aa10.35□□□□□ -0.75
NR1I3-209ENST00000428574 MRPL11Q9Y3B7 192 aaKnown RBP10.35□□□□□ -0.75
NR1I3-209ENST00000428574 RABGAP1Q9Y3P9 1069 aa10.35□□□□□ -0.75
NR1I3-209ENST00000428574 ADM5C9JUS6 153 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 ICAM1P05362 532 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 USP11P51784 963 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 SPP2Q13103 211 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 PPIL2Q13356 520 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 TKFCQ3LXA3 575 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms