RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 ELP1O95163 1332 aa20.66■□□□□ 0.9
DDR1-235ENST00000428153 MROH7Q68CQ1 1323 aa20.65■□□□□ 0.9
DDR1-235ENST00000428153 TMEM232C9JQI7 657 aa20.65■□□□□ 0.9
DDR1-235ENST00000428153 SLC1A4P43007 532 aa20.65■□□□□ 0.9
DDR1-235ENST00000428153 NOVP48745 357 aa20.65■□□□□ 0.9
DDR1-235ENST00000428153 NKX3-2P78367 333 aa20.65■□□□□ 0.9
DDR1-235ENST00000428153 SMAD3P84022 425 aaKnown RBP20.65■□□□□ 0.9
DDR1-235ENST00000428153 ZNF697Q5TEC3 545 aa20.65■□□□□ 0.9
DDR1-235ENST00000428153 EVI5LQ96CN4 794 aa20.65■□□□□ 0.9
DDR1-235ENST00000428153 FGD4Q96M96 766 aa20.65■□□□□ 0.9
DDR1-235ENST00000428153 ACAD9Q9H845 621 aa20.65■□□□□ 0.9
DDR1-235ENST00000428153 STARD7Q9NQZ5 370 aa20.65■□□□□ 0.9
DDR1-235ENST00000428153 ZHX1Q9UKY1 873 aaPredicted RBP20.65■□□□□ 0.9
DDR1-235ENST00000428153 TSPY2A6NKD2 308 aa20.64■□□□□ 0.89
DDR1-235ENST00000428153 FOXP2O15409 715 aa20.64■□□□□ 0.89
DDR1-235ENST00000428153 RRP1P56182 461 aaKnown RBP20.64■□□□□ 0.89
DDR1-235ENST00000428153 ALX1Q15699 326 aa20.64■□□□□ 0.89
DDR1-235ENST00000428153 C9orf50Q5SZB4 431 aa20.64■□□□□ 0.89
DDR1-235ENST00000428153 ARMCX2Q7L311 632 aa20.64■□□□□ 0.89
DDR1-235ENST00000428153 UPF3AQ9H1J1 476 aaKnown RBP20.64■□□□□ 0.89
DDR1-235ENST00000428153 CDH23Q9H251 3354 aa20.63■□□□□ 0.89
DDR1-235ENST00000428153 DCDC2CA8MYV0 355 aa20.63■□□□□ 0.89
DDR1-235ENST00000428153 DLL1O00548 723 aa20.63■□□□□ 0.89
DDR1-235ENST00000428153 FGRP09769 529 aa20.63■□□□□ 0.89
DDR1-235ENST00000428153 RAG1P15918 1043 aa20.63■□□□□ 0.89
DDR1-235ENST00000428153 GJA9P57773 515 aa20.63■□□□□ 0.89
DDR1-235ENST00000428153 KCNA10Q16322 511 aa20.63■□□□□ 0.89
DDR1-235ENST00000428153 FAM133AQ8N9E0 248 aa20.63■□□□□ 0.89
DDR1-235ENST00000428153 LENG1Q96BZ8 264 aaPredicted RBP20.63■□□□□ 0.89
DDR1-235ENST00000428153 GLT1D1Q96MS3 346 aa20.63■□□□□ 0.89
DDR1-235ENST00000428153 HELLSQ9NRZ9 838 aa20.63■□□□□ 0.89
DDR1-235ENST00000428153 STX8Q9UNK0 236 aa20.63■□□□□ 0.89
DDR1-235ENST00000428153 ZNF536O15090 1300 aa20.62■□□□□ 0.89
DDR1-235ENST00000428153 TMEM265A0A087WTH1 108 aa20.62■□□□□ 0.89
DDR1-235ENST00000428153 ORC4O43929 436 aa20.62■□□□□ 0.89
DDR1-235ENST00000428153 PQBP1O60828 265 aaKnown RBP20.62■□□□□ 0.89
DDR1-235ENST00000428153 SLC4A3P48751 1232 aa20.62■□□□□ 0.89
DDR1-235ENST00000428153 FAAP100Q0VG06 881 aa20.62■□□□□ 0.89
DDR1-235ENST00000428153 HDAC1Q13547 482 aaPredicted RBP20.62■□□□□ 0.89
DDR1-235ENST00000428153 CCDC144BQ3MJ40 725 aa20.62■□□□□ 0.89
DDR1-235ENST00000428153 RCSD1Q6JBY9 416 aa20.62■□□□□ 0.89
DDR1-235ENST00000428153 GUCD1Q96NT3 240 aa20.62■□□□□ 0.89
DDR1-235ENST00000428153 KATNBL1Q9H079 304 aa20.62■□□□□ 0.89
DDR1-235ENST00000428153 TMEM39AQ9NV64 488 aa20.62■□□□□ 0.89
DDR1-235ENST00000428153 MCM3APO60318 1980 aa20.61■□□□□ 0.89
DDR1-235ENST00000428153 ASB14A6NK59 587 aa20.61■□□□□ 0.89
DDR1-235ENST00000428153 ITGB8P26012 769 aa20.61■□□□□ 0.89
DDR1-235ENST00000428153 CDK7P50613 346 aa20.61■□□□□ 0.89
DDR1-235ENST00000428153 AAMPQ13685 434 aa20.61■□□□□ 0.89
DDR1-235ENST00000428153 ANKRD45Q5TZF3 282 aa20.61■□□□□ 0.89
DDR1-235ENST00000428153 CCDC144CPQ8IYA2 1237 aa20.61■□□□□ 0.89
DDR1-235ENST00000428153 A1CFQ9NQ94 594 aaKnown RBP20.61■□□□□ 0.89
DDR1-235ENST00000428153 IL17RBQ9NRM6 502 aa20.61■□□□□ 0.89
DDR1-235ENST00000428153 RNF146Q9NTX7 359 aa20.61■□□□□ 0.89
DDR1-235ENST00000428153 ZMYM6O95789 1325 aa20.6■□□□□ 0.89
DDR1-235ENST00000428153 C6orf222P0C671 652 aaPredicted RBP20.6■□□□□ 0.89
DDR1-235ENST00000428153 MCCP23508 829 aa20.6■□□□□ 0.89
DDR1-235ENST00000428153 FPGSQ05932 587 aa20.6■□□□□ 0.89
DDR1-235ENST00000428153 IKQ13123 557 aaPredicted RBP20.6■□□□□ 0.89
DDR1-235ENST00000428153 EYSQ5T1H1 3165 aa20.59■□□□□ 0.89
DDR1-235ENST00000428153 ASGR1P07306 291 aa20.59■□□□□ 0.89
DDR1-235ENST00000428153 PDE1AP54750 535 aa20.59■□□□□ 0.89
DDR1-235ENST00000428153 CCDC129Q6ZRS4 1044 aa20.59■□□□□ 0.89
DDR1-235ENST00000428153 DCAF4Q8WV16 495 aa20.59■□□□□ 0.89
DDR1-235ENST00000428153 AGBL1Q96MI9 1066 aa20.59■□□□□ 0.89
DDR1-235ENST00000428153 TRERF1Q96PN7 1200 aa20.59■□□□□ 0.89
DDR1-235ENST00000428153 SEZ6LQ9BYH1 1024 aa20.59■□□□□ 0.89
DDR1-235ENST00000428153 HOMER2Q9NSB8 354 aa20.59■□□□□ 0.89
DDR1-235ENST00000428153 TBX21Q9UL17 535 aa20.59■□□□□ 0.89
DDR1-235ENST00000428153 ISY1Q9ULR0 285 aaKnown RBP20.59■□□□□ 0.89
DDR1-235ENST00000428153 LOC102724159A0A0B4J2E5 919 aa20.58■□□□□ 0.89
DDR1-235ENST00000428153 A0A0U1RQG5 324 aaPredicted RBP20.58■□□□□ 0.89
DDR1-235ENST00000428153 ADCY6O43306 1168 aa20.58■□□□□ 0.89
DDR1-235ENST00000428153 TIMP1P01033 207 aa20.58■□□□□ 0.89
DDR1-235ENST00000428153 CNTN2Q02246 1040 aa20.58■□□□□ 0.89
DDR1-235ENST00000428153 CTDSPL2Q05D32 466 aa20.58■□□□□ 0.89
DDR1-235ENST00000428153 PWP2Q15269 919 aaKnown RBP20.58■□□□□ 0.89
DDR1-235ENST00000428153 GNASQ5JWF2 1037 aa20.58■□□□□ 0.89
DDR1-235ENST00000428153 RNPC3Q96LT9 517 aaKnown RBP20.58■□□□□ 0.89
DDR1-235ENST00000428153 SEMA6BQ9H3T3 888 aa20.58■□□□□ 0.89
DDR1-235ENST00000428153 TCP11L1Q9NUJ3 509 aa20.58■□□□□ 0.89
DDR1-235ENST00000428153 PNMA2Q9UL42 364 aa20.58■□□□□ 0.89
DDR1-235ENST00000428153 PRR12Q9ULL5 1215 aa20.58■□□□□ 0.89
DDR1-235ENST00000428153 MYADML2A6NDP7 307 aa20.57■□□□□ 0.88
DDR1-235ENST00000428153 ARVCFO00192 962 aa20.57■□□□□ 0.88
DDR1-235ENST00000428153 RANBP6O60518 1105 aaKnown RBP20.57■□□□□ 0.88
DDR1-235ENST00000428153 CABYRO75952 493 aa20.57■□□□□ 0.88
DDR1-235ENST00000428153 PCP11498 1178 aaKnown RBP20.57■□□□□ 0.88
DDR1-235ENST00000428153 NT5C2P49902 561 aa20.57■□□□□ 0.88
DDR1-235ENST00000428153 MCMDC2Q4G0Z9 681 aa20.57■□□□□ 0.88
DDR1-235ENST00000428153 VPS53Q5VIR6 699 aa20.57■□□□□ 0.88
DDR1-235ENST00000428153 MFSD5Q6N075 450 aa20.57■□□□□ 0.88
DDR1-235ENST00000428153 CCDC174Q6PII3 467 aa20.57■□□□□ 0.88
DDR1-235ENST00000428153 BTNL9Q6UXG8 535 aa20.57■□□□□ 0.88
DDR1-235ENST00000428153 KCTD1Q719H9 257 aa20.57■□□□□ 0.88
DDR1-235ENST00000428153 Q9Y3F1 56 aa20.57■□□□□ 0.88
DDR1-235ENST00000428153 SOWAHBA6NEL2 793 aa20.56■□□□□ 0.88
DDR1-235ENST00000428153 CTAGE5O15320 804 aa20.56■□□□□ 0.88
DDR1-235ENST00000428153 FGAP02671 866 aa20.56■□□□□ 0.88
DDR1-235ENST00000428153 ICAM1P05362 532 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms