RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 KMT5BQ4FZB7 885 aa10.76□□□□□ -0.69
SNX13-203ENST00000428135 CYP26C1Q6V0L0 522 aa10.76□□□□□ -0.69
SNX13-203ENST00000428135 SEPT10Q9P0V9 454 aa10.76□□□□□ -0.69
SNX13-203ENST00000428135 ASIC3Q9UHC3 531 aa10.76□□□□□ -0.69
SNX13-203ENST00000428135 DIP2CQ9Y2E4 1556 aa10.76□□□□□ -0.69
SNX13-203ENST00000428135 ADCY9O60503 1353 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 SPATA31A1Q5TZJ5 1347 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 ITKQ08881 620 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 SLC9C1Q4G0N8 1177 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 CFAP157Q5JU67 520 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 ATL3Q6DD88 541 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 ZNF365Q70YC5 407 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 DAAM2Q86T65 1068 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 TSGA10Q9BZW7 698 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 MTRF1LQ9UGC7 380 aaKnown RBP10.75□□□□□ -0.69
SNX13-203ENST00000428135 KDM2BQ8NHM5 1336 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 OR52Z1P0C646 297 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 ATP2A2P16615 1042 aaKnown RBP10.75□□□□□ -0.69
SNX13-203ENST00000428135 TNNC1P63316 161 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 GDAP1L1Q96MZ0 367 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 ZNF577Q9BSK1 485 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 PARP2Q9UGN5 583 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 CRB1P82279 1406 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 CAPN9O14815 690 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 VPS41P49754 854 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 LRRC41Q15345 812 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 LRCH2Q5VUJ6 765 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 CAPN12Q6ZSI9 719 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 ARMC9Q7Z3E5 817 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 MED23Q9ULK4 1368 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 MAGEA1P43355 309 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 LLGL1Q15334 1064 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 CCDC14Q49A88 953 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 CC2D2BQ6DHV5 1058 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 ARMCX5Q6P1M9 558 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 MCF2L2Q86YR7 1114 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 POMGNT1Q8WZA1 660 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 PCIF1Q9H4Z3 704 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 ZKSCAN5Q9Y2L8 839 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 COL15A1P39059 1388 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 ADGRB3O60242 1522 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 TTLL1O95922 423 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 OSBPP22059 807 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 PDIA3P30101 505 aaKnown RBP10.75□□□□□ -0.69
SNX13-203ENST00000428135 PHLDB2Q86SQ0 1253 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 RASEFQ8IZ41 740 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 PPM1KQ8N3J5 372 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 ZNF341Q9BYN7 854 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 CPVLQ9H3G5 476 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 TDRD3Q9H7E2 651 aaKnown RBP10.75□□□□□ -0.69
SNX13-203ENST00000428135 PFDN4Q9NQP4 134 aa10.75□□□□□ -0.69
SNX13-203ENST00000428135 BBOX1O75936 387 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 BCRP11274 1271 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 VAV2P52735 878 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 PPP2R3AQ06190 1150 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 NFIXQ14938 502 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 SFMBT2Q5VUG0 894 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 SMYD4Q8IYR2 804 aaPredicted RBP10.74□□□□□ -0.69
SNX13-203ENST00000428135 HACE1Q8IYU2 909 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 SMC1BQ8NDV3 1235 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 SYMPKQ92797 1274 aaKnown RBP10.74□□□□□ -0.69
SNX13-203ENST00000428135 SLC10A4Q96EP9 437 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 SPDYE16A6NNV3 312 aaPredicted RBP10.74□□□□□ -0.69
SNX13-203ENST00000428135 INO80B-WBP1J3KQ70 363 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 BUB1O43683 1085 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 MAN1A1P33908 653 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 SPDYE2Q495Y8 402 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 ZBTB33Q86T24 672 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 DDX12PQ92771 950 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 ADPGKQ9BRR6 497 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 INO80BQ9C086 356 aaPredicted RBP10.74□□□□□ -0.69
SNX13-203ENST00000428135 PIH1D3Q9NQM4 214 aaKnown RBP10.74□□□□□ -0.69
SNX13-203ENST00000428135 CYP2D6P10635 497 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 DMP1Q13316 513 aaPredicted RBP10.74□□□□□ -0.69
SNX13-203ENST00000428135 SUPT20HL1Q3ZLR7 823 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 VWA3BQ502W6 1294 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 MYOCDQ8IZQ8 938 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 NARFQ9UHQ1 456 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 RNF17Q9BXT8 1623 aaKnown RBP10.74□□□□□ -0.69
SNX13-203ENST00000428135 MLKLQ8NB16 471 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 FTOQ9C0B1 505 aaKnown RBP eCLIP10.74□□□□□ -0.69
SNX13-203ENST00000428135 NT5C3AQ9H0P0 336 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 SERPINB13Q9UIV8 391 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 MAGED2Q9UNF1 606 aaPredicted RBP10.74□□□□□ -0.69
SNX13-203ENST00000428135 MAP7D1Q3KQU3 841 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 C6orf163Q5TEZ5 329 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 GRAMD1CQ8IYS0 662 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 GIMAP7Q8NHV1 300 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 SH3RF3Q8TEJ3 882 aaPredicted RBP10.74□□□□□ -0.69
SNX13-203ENST00000428135 OSBP2Q969R2 916 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 ARHGAP31Q2M1Z3 1444 aa10.74□□□□□ -0.69
SNX13-203ENST00000428135 DIP2BQ9P265 1576 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 XRCC5P13010 732 aaKnown RBP10.73□□□□□ -0.69
SNX13-203ENST00000428135 CELF1Q92879 486 aaKnown RBP10.73□□□□□ -0.69
SNX13-203ENST00000428135 AP5M1Q9H0R1 490 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 SEMA3EO15041 775 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 EIF2AK2P19525 551 aaKnown RBP10.73□□□□□ -0.69
SNX13-203ENST00000428135 EVCP57679 992 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 GRAPQ13588 217 aa10.73□□□□□ -0.69
SNX13-203ENST00000428135 RASGRF1Q13972 1273 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms