RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 NKX3-2P78367 333 aa17.44■□□□□ 0.38
PDE6D-203ENST00000428104 SNRNP48Q6IEG0 339 aaKnown RBP17.44■□□□□ 0.38
PDE6D-203ENST00000428104 ZNF467Q7Z7K2 595 aaPredicted RBP17.44■□□□□ 0.38
PDE6D-203ENST00000428104 GDPD5Q8WTR4 605 aa17.44■□□□□ 0.38
PDE6D-203ENST00000428104 DYNLL2Q96FJ2 89 aa17.44■□□□□ 0.38
PDE6D-203ENST00000428104 ZNF512BQ96KM6 892 aaPredicted RBP17.44■□□□□ 0.38
PDE6D-203ENST00000428104 FGD4Q96M96 766 aa17.44■□□□□ 0.38
PDE6D-203ENST00000428104 COL11A1P12107 1806 aaPredicted RBP17.44■□□□□ 0.38
PDE6D-203ENST00000428104 CABYRO75952 493 aa17.43■□□□□ 0.38
PDE6D-203ENST00000428104 PFKMP08237 780 aa17.43■□□□□ 0.38
PDE6D-203ENST00000428104 GNAI3P08754 354 aa17.43■□□□□ 0.38
PDE6D-203ENST00000428104 IL9P15248 144 aa17.43■□□□□ 0.38
PDE6D-203ENST00000428104 KCNA5P22460 613 aa17.43■□□□□ 0.38
PDE6D-203ENST00000428104 SLC4A3P48751 1232 aa17.43■□□□□ 0.38
PDE6D-203ENST00000428104 FAM83BQ5T0W9 1011 aa17.43■□□□□ 0.38
PDE6D-203ENST00000428104 NOL8Q76FK4 1167 aaKnown RBP17.43■□□□□ 0.38
PDE6D-203ENST00000428104 ARMCX2Q7L311 632 aa17.43■□□□□ 0.38
PDE6D-203ENST00000428104 HERC6Q8IVU3 1022 aa17.43■□□□□ 0.38
PDE6D-203ENST00000428104 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.43■□□□□ 0.38
PDE6D-203ENST00000428104 SLC9A7Q96T83 725 aa17.43■□□□□ 0.38
PDE6D-203ENST00000428104 TEX13BQ9BXU2 312 aa17.43■□□□□ 0.38
PDE6D-203ENST00000428104 KATNBL1Q9H079 304 aa17.43■□□□□ 0.38
PDE6D-203ENST00000428104 PARP14Q460N5 1801 aa17.42■□□□□ 0.38
PDE6D-203ENST00000428104 DCXO43602 365 aa17.42■□□□□ 0.38
PDE6D-203ENST00000428104 RAD21O60216 631 aa17.42■□□□□ 0.38
PDE6D-203ENST00000428104 CYP2C9P11712 490 aa17.42■□□□□ 0.38
PDE6D-203ENST00000428104 FSCN1Q16658 493 aaKnown RBP17.42■□□□□ 0.38
PDE6D-203ENST00000428104 LEXMQ3ZCV2 418 aa17.42■□□□□ 0.38
PDE6D-203ENST00000428104 ANTXR1Q9H6X2 564 aa17.42■□□□□ 0.38
PDE6D-203ENST00000428104 GPR108Q9NPR9 543 aa17.42■□□□□ 0.38
PDE6D-203ENST00000428104 TLR7Q9NYK1 1049 aaKnown RBP17.42■□□□□ 0.38
PDE6D-203ENST00000428104 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.41■□□□□ 0.38
PDE6D-203ENST00000428104 EEF2P13639 858 aaKnown RBP17.41■□□□□ 0.38
PDE6D-203ENST00000428104 TNFAIP2Q03169 654 aa17.41■□□□□ 0.38
PDE6D-203ENST00000428104 CCDC144CPQ8IYA2 1237 aa17.41■□□□□ 0.38
PDE6D-203ENST00000428104 PHOSPHO2Q8TCD6 241 aa17.41■□□□□ 0.38
PDE6D-203ENST00000428104 API5Q9BZZ5 524 aaKnown RBP17.41■□□□□ 0.38
PDE6D-203ENST00000428104 ALDH8A1Q9H2A2 487 aaPredicted RBP17.41■□□□□ 0.38
PDE6D-203ENST00000428104 LCHNA4D1U4 455 aa17.4■□□□□ 0.38
PDE6D-203ENST00000428104 KIF28PB7ZC32 967 aa17.4■□□□□ 0.38
PDE6D-203ENST00000428104 ACTN1P12814 892 aa17.4■□□□□ 0.38
PDE6D-203ENST00000428104 PTCRAQ6ISU1 281 aaPredicted RBP17.4■□□□□ 0.38
PDE6D-203ENST00000428104 HFE2Q6ZVN8 426 aa17.4■□□□□ 0.38
PDE6D-203ENST00000428104 TLK2Q86UE8 772 aa17.4■□□□□ 0.38
PDE6D-203ENST00000428104 SDR42E1Q8WUS8 393 aa17.4■□□□□ 0.38
PDE6D-203ENST00000428104 NUP88Q99567 741 aaPredicted RBP17.4■□□□□ 0.38
PDE6D-203ENST00000428104 CRNKL1Q9BZJ0 848 aaKnown RBP17.4■□□□□ 0.38
PDE6D-203ENST00000428104 TRMT13Q9NUP7 481 aaKnown RBP17.4■□□□□ 0.38
PDE6D-203ENST00000428104 DBNLQ9UJU6 430 aaKnown RBP17.4■□□□□ 0.38
PDE6D-203ENST00000428104 COL4A4P53420 1690 aaPredicted RBP17.39■□□□□ 0.37
PDE6D-203ENST00000428104 MAGEB6P1A0A0J9YX57 407 aa17.39■□□□□ 0.37
PDE6D-203ENST00000428104 POTEB3A0JP26 581 aa17.39■□□□□ 0.37
PDE6D-203ENST00000428104 POTEBQ6S5H4 581 aa17.39■□□□□ 0.37
PDE6D-203ENST00000428104 ANKRD35Q8N283 1001 aa17.39■□□□□ 0.37
PDE6D-203ENST00000428104 LMCD1Q9NZU5 365 aa17.39■□□□□ 0.37
PDE6D-203ENST00000428104 SWAP70Q9UH65 585 aa17.39■□□□□ 0.37
PDE6D-203ENST00000428104 MTUS1Q9ULD2 1270 aa17.39■□□□□ 0.37
PDE6D-203ENST00000428104 GNEQ9Y223 722 aaKnown RBP17.39■□□□□ 0.37
PDE6D-203ENST00000428104 ZNF536O15090 1300 aa17.39■□□□□ 0.37
PDE6D-203ENST00000428104 C5orf42Q9H799 3197 aa17.38■□□□□ 0.37
PDE6D-203ENST00000428104 E9PSI1 815 aa17.38■□□□□ 0.37
PDE6D-203ENST00000428104 DYNC1LI2O43237 492 aaPredicted RBP17.38■□□□□ 0.37
PDE6D-203ENST00000428104 FAM9BQ8IZU0 186 aa17.38■□□□□ 0.37
PDE6D-203ENST00000428104 CPXCR1Q8N123 301 aa17.38■□□□□ 0.37
PDE6D-203ENST00000428104 SLF1Q9BQI6 1058 aa17.38■□□□□ 0.37
PDE6D-203ENST00000428104 SEZ6LQ9BYH1 1024 aa17.38■□□□□ 0.37
PDE6D-203ENST00000428104 AP5M1Q9H0R1 490 aa17.38■□□□□ 0.37
PDE6D-203ENST00000428104 GOPCQ9HD26 462 aa17.38■□□□□ 0.37
PDE6D-203ENST00000428104 DCP1AQ9NPI6 582 aaPredicted RBP17.38■□□□□ 0.37
PDE6D-203ENST00000428104 NAV1Q8NEY1 1877 aa17.37■□□□□ 0.37
PDE6D-203ENST00000428104 GRXCR2A6NFK2 248 aa17.37■□□□□ 0.37
PDE6D-203ENST00000428104 ST18O60284 1047 aa17.37■□□□□ 0.37
PDE6D-203ENST00000428104 CNTN2Q02246 1040 aa17.37■□□□□ 0.37
PDE6D-203ENST00000428104 OS9Q13438 667 aaPredicted RBP17.37■□□□□ 0.37
PDE6D-203ENST00000428104 TMCO2Q7Z6W1 182 aaPredicted RBP17.37■□□□□ 0.37
PDE6D-203ENST00000428104 FTOQ9C0B1 505 aaKnown RBP eCLIP17.37■□□□□ 0.37
PDE6D-203ENST00000428104 CCDC8Q9H0W5 538 aaPredicted RBP17.37■□□□□ 0.37
PDE6D-203ENST00000428104 DDX49Q9Y6V7 483 aaKnown RBP17.37■□□□□ 0.37
PDE6D-203ENST00000428104 ZNF318Q5VUA4 2279 aa17.36■□□□□ 0.37
PDE6D-203ENST00000428104 ZEB2O60315 1214 aa17.36■□□□□ 0.37
PDE6D-203ENST00000428104 GNAI2P04899 355 aa17.36■□□□□ 0.37
PDE6D-203ENST00000428104 SMPD1P17405 629 aa17.36■□□□□ 0.37
PDE6D-203ENST00000428104 TMEM63BQ5T3F8 832 aa17.36■□□□□ 0.37
PDE6D-203ENST00000428104 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.36■□□□□ 0.37
PDE6D-203ENST00000428104 SUGCTQ9HAC7 445 aa17.36■□□□□ 0.37
PDE6D-203ENST00000428104 RAVER2Q9HCJ3 691 aaKnown RBP17.36■□□□□ 0.37
PDE6D-203ENST00000428104 TNKSO95271 1327 aa17.36■□□□□ 0.37
PDE6D-203ENST00000428104 CYP2D7A0A087X1C5 515 aa17.35■□□□□ 0.37
PDE6D-203ENST00000428104 SUPT20HL2P0C7V6 817 aa17.35■□□□□ 0.37
PDE6D-203ENST00000428104 CDK8P49336 464 aa17.35■□□□□ 0.37
PDE6D-203ENST00000428104 LCORLQ8N3X6 602 aa17.35■□□□□ 0.37
PDE6D-203ENST00000428104 PRSS33Q8NF86 280 aa17.35■□□□□ 0.37
PDE6D-203ENST00000428104 CCDC17Q96LX7 622 aa17.35■□□□□ 0.37
PDE6D-203ENST00000428104 KANSL2Q9H9L4 492 aa17.35■□□□□ 0.37
PDE6D-203ENST00000428104 ZDBF2Q9HCK1 2354 aa17.35■□□□□ 0.37
PDE6D-203ENST00000428104 H3BQ06 376 aaPredicted RBP17.34■□□□□ 0.37
PDE6D-203ENST00000428104 ATP2A1O14983 1001 aa17.34■□□□□ 0.37
PDE6D-203ENST00000428104 MCM3APO60318 1980 aa17.34■□□□□ 0.37
PDE6D-203ENST00000428104 RFC2P35250 354 aa17.34■□□□□ 0.37
PDE6D-203ENST00000428104 SLFN5Q08AF3 891 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms