RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 CFAP65Q6ZU64 1925 aaKnown RBP10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 TTLL1O95922 423 aa10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 IVLP07476 585 aa10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 UBXN2AP68543 259 aa10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 EN1Q05925 392 aaPredicted RBP10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 GIGYF1O75420 1035 aaPredicted RBP10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 HEXIM1O94992 359 aaKnown RBP10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 NFX1Q12986 1120 aaKnown RBP10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 POMGNT1Q8WZA1 660 aa10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 GREM2Q9H772 168 aa10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 IPO11Q9UI26 975 aaKnown RBP10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 NOL3O60936 208 aaKnown RBP10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 GNA14O95837 355 aa10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 STAT2P52630 851 aa10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 SETDB1Q15047 1291 aa10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 BLIDQ8IZY5 108 aa10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 ZNF577Q9BSK1 485 aa10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 IFNKQ9P0W0 207 aa10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 ANAPC5Q9UJX4 755 aa10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 PTPRTO14522 1441 aa10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 AKR1B15C9JRZ8 316 aaPredicted RBP10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 CHL1O00533 1208 aa10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 HNRNPDLO14979 420 aaKnown RBP10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 PDE6AP16499 860 aa10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 PIK3CAP42336 1068 aa10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 PALM2Q8IXS6 379 aa10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 CERKQ8TCT0 537 aa10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 RSAD2Q8WXG1 361 aa10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 SRP68Q9UHB9 627 aaKnown RBP10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 RIPOR2Q9Y4F9 1068 aa10.94□□□□□ -0.66
CLTCL1-202ENST00000427926 SEC24BO95487 1268 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 XRCC5P13010 732 aaKnown RBP10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 CPA1P15085 419 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 RNASE9P60153 205 aaKnown RBP10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 KLHL30Q0D2K2 578 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 LRCH2Q5VUJ6 765 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 KRT40Q6A162 431 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 NEK8Q86SG6 692 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 NUP58Q9BVL2 599 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 TPCN1Q9ULQ1 816 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 PAXBP1Q9Y5B6 917 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 BMP3P12645 472 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 FAM160A1Q05DH4 1040 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 TYRO3Q06418 890 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 CACTINQ8WUQ7 758 aaKnown RBP10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 RAB20Q9NX57 234 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 PI4KBQ9UBF8 816 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 MLH3Q9UHC1 1453 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 TECP42680 631 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 BEND3Q5T5X7 828 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 SPDYE1Q8NFV5 336 aaPredicted RBP10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 PPP1R16BQ96T49 567 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 FAM49AQ9H0Q0 323 aaPredicted RBP10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 PALLDQ8WX93 1383 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 CLASP1Q7Z460 1538 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 NFKBIAP25963 317 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 KRT33BQ14525 404 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 PLEKHM2Q8IWE5 1019 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 SLC17A8Q8NDX2 589 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 CCDC127Q96BQ5 260 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 NUCKS1Q9H1E3 243 aaKnown RBP10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.93□□□□□ -0.662e-6■■■□□ 16.5
CLTCL1-202ENST00000427926 COL4A3BPQ9Y5P4 624 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 MYO3BQ8WXR4 1341 aa10.93□□□□□ -0.66
CLTCL1-202ENST00000427926 A6NJR5 290 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 ZNF233A6NK53 670 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 WDR64B1ANS9 1081 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 GRAPQ13588 217 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 ASPRV1Q53RT3 343 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 RNF219Q5W0B1 726 aaPredicted RBP10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 APOBEC3FQ8IUX4 373 aaKnown RBP10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 IGSF22Q8N9C0 903 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 GRAPLQ8TC17 118 aaPredicted RBP10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 MAIP1Q8WWC4 291 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 NCAPGQ9BPX3 1015 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 SERPINB13Q9UIV8 391 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 UTP11Q9Y3A2 253 aaKnown RBP10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 BNIP3LO60238 219 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 S100BP04271 92 aaPredicted RBP10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 R3HDM1Q15032 1099 aaKnown RBP10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 RC3H1Q5TC82 1133 aaKnown RBP10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 CCDC186Q7Z3E2 898 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 RPUSD2Q8IZ73 545 aaKnown RBP10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 DSCC1Q9BVC3 393 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 TNKSO95271 1327 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 DENND3A2RUS2 1198 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 PDE6CP51160 858 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 KCTD1Q719H9 257 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 ATP2A3Q93084 1043 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 FAM149B1Q96BN6 582 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 ZNF341Q9BYN7 854 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 COA1Q9GZY4 146 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 TRIM35Q9UPQ4 493 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 PRPSAP1Q14558 356 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 AOC3Q16853 763 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 FYB2Q5VWT5 728 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 DSTYKQ6XUX3 929 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 SYCE1Q8N0S2 351 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 GPATCH11Q8N954 259 aa10.92□□□□□ -0.66
CLTCL1-202ENST00000427926 RABGAP1Q9Y3P9 1069 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms