RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 ELNP15502 786 aa9.55□□□□□ -0.88
SMARCAL1-206ENST00000427645 KLRC3Q07444 240 aa9.55□□□□□ -0.88
SMARCAL1-206ENST00000427645 RRP1BQ14684 758 aaKnown RBP9.55□□□□□ -0.88
SMARCAL1-206ENST00000427645 SLFN13Q68D06 897 aa9.55□□□□□ -0.88
SMARCAL1-206ENST00000427645 GADL1Q6ZQY3 521 aa9.55□□□□□ -0.88
SMARCAL1-206ENST00000427645 TMTC3Q6ZXV5 915 aa9.55□□□□□ -0.88
SMARCAL1-206ENST00000427645 RAB11FIP4Q86YS3 637 aa9.55□□□□□ -0.88
SMARCAL1-206ENST00000427645 SIAH1Q8IUQ4 282 aa9.55□□□□□ -0.88
SMARCAL1-206ENST00000427645 SCYL3Q8IZE3 742 aa9.55□□□□□ -0.88
SMARCAL1-206ENST00000427645 DDX11Q96FC9 970 aa9.55□□□□□ -0.88
SMARCAL1-206ENST00000427645 RNF208Q9H0X6 261 aa9.55□□□□□ -0.88
SMARCAL1-206ENST00000427645 UNC93B1Q9H1C4 597 aa9.55□□□□□ -0.88
SMARCAL1-206ENST00000427645 PICK1Q9NRD5 415 aa9.55□□□□□ -0.88
SMARCAL1-206ENST00000427645 MAD2L2Q9UI95 211 aa9.55□□□□□ -0.88
SMARCAL1-206ENST00000427645 ATP6V1DQ9Y5K8 247 aa9.55□□□□□ -0.88
SMARCAL1-206ENST00000427645 RBBP6Q7Z6E9 1792 aaKnown RBP9.55□□□□□ -0.88
SMARCAL1-206ENST00000427645 TRIM75PA6NK02 468 aa9.54□□□□□ -0.88
SMARCAL1-206ENST00000427645 KLRF2D3W0D1 207 aa9.54□□□□□ -0.88
SMARCAL1-206ENST00000427645 JAK2O60674 1132 aa9.54□□□□□ -0.88
SMARCAL1-206ENST00000427645 BCRP11274 1271 aa9.54□□□□□ -0.88
SMARCAL1-206ENST00000427645 FDPSP14324 419 aaKnown RBP9.54□□□□□ -0.88
SMARCAL1-206ENST00000427645 PTPRAP18433 802 aa9.54□□□□□ -0.88
SMARCAL1-206ENST00000427645 HOXD10P28358 340 aa9.54□□□□□ -0.88
SMARCAL1-206ENST00000427645 SLC1A4P43007 532 aa9.54□□□□□ -0.88
SMARCAL1-206ENST00000427645 USP14P54578 494 aa9.54□□□□□ -0.88
SMARCAL1-206ENST00000427645 PRMT2P55345 433 aa9.54□□□□□ -0.88
SMARCAL1-206ENST00000427645 ZNF543Q08ER8 600 aa9.54□□□□□ -0.88
SMARCAL1-206ENST00000427645 TRIM29Q14134 588 aa9.54□□□□□ -0.88
SMARCAL1-206ENST00000427645 NOL9Q5SY16 702 aaKnown RBP9.54□□□□□ -0.88
SMARCAL1-206ENST00000427645 FAM177A1Q8N128 213 aaPredicted RBP9.54□□□□□ -0.88
SMARCAL1-206ENST00000427645 GMCL1Q96IK5 515 aa9.54□□□□□ -0.88
SMARCAL1-206ENST00000427645 PARK7Q99497 189 aaKnown RBP9.54□□□□□ -0.88
SMARCAL1-206ENST00000427645 WDR18Q9BV38 432 aa9.54□□□□□ -0.88
SMARCAL1-206ENST00000427645 SPZ1Q9BXG8 430 aa9.54□□□□□ -0.88
SMARCAL1-206ENST00000427645 SLC26A6Q9BXS9 759 aa9.54□□□□□ -0.88
SMARCAL1-206ENST00000427645 AFG3L2Q9Y4W6 797 aa9.54□□□□□ -0.88
SMARCAL1-206ENST00000427645 V9GY48 417 aaPredicted RBP9.54□□□□□ -0.88
SMARCAL1-206ENST00000427645 A0A0G2JLL6 359 aaPredicted RBP9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 C19orf81C9J6K1 198 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 USP17L10C9JJH3 530 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 CXCL11O14625 94 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 BRD1O95696 1058 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 GJB1P08034 283 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 ZSCAN22P10073 491 aaPredicted RBP9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 BMP3P12645 472 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 GJA8P48165 433 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 FLT3LGP49771 235 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 FCGRTP55899 365 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 JAG1P78504 1218 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 TRAF1Q13077 416 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 USP17L2Q6R6M4 530 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 PRRT2Q7Z6L0 340 aaPredicted RBP9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 LRRC47Q8N1G4 583 aaKnown RBP9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 CCDC82Q8N4S0 544 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 SRBD1Q8N5C6 995 aaKnown RBP9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 FBXO18Q8NFZ0 1043 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 U2AF1L4Q8WU68 220 aaKnown RBP9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 CHURC1Q8WUH1 139 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 LPAR1Q92633 364 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 PHKBQ93100 1093 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 C8orf76Q96K31 380 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 ALG1Q9BT22 464 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 KIAA1683Q9H0B3 1180 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 ZSCAN16Q9H4T2 348 aaPredicted RBP9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 RIOX1Q9H6W3 641 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 VCPKMTQ9H867 229 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 MTMR7Q9Y216 660 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 ATAD5Q96QE3 1844 aa9.53□□□□□ -0.88
SMARCAL1-206ENST00000427645 A0A1W2PRG0 241 aa9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 hCG_1984214I3L0E3 225 aa9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 ADCY3O60266 1144 aa9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 PLA2G6O60733 806 aa9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 FUT2Q10981 343 aa9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 SAFBQ15424 915 aaKnown RBP eCLIP9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 PFKFB3Q16875 520 aaPredicted RBP9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 CCDC96Q2M329 555 aa9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 TREML2Q5T2D2 321 aa9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 UBE2Q1Q7Z7E8 422 aa9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 CMTR1Q8N1G2 835 aaKnown RBP9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 STAG2Q8N3U4 1231 aa9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 ANKRD13CQ8N6S4 541 aa9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 ZNF713Q8N859 430 aaPredicted RBP9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 ZNF280CQ8ND82 737 aa9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 SMCR8Q8TEV9 937 aaPredicted RBP9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 CCDC12Q8WUD4 166 aaPredicted RBP9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 BBXQ8WY36 941 aaPredicted RBP9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 RRP36Q96EU6 259 aaKnown RBP9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 GBP4Q96PP9 640 aa9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 FEZ1Q99689 392 aa9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 SH3GLB2Q9NR46 395 aa9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 SEC63Q9UGP8 760 aaKnown RBP9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 MTMR6Q9Y217 621 aa9.52□□□□□ -0.89
SMARCAL1-206ENST00000427645 MYH6P13533 1939 aa9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 VPS37CA5D8V6 355 aaPredicted RBP9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 TNPO2O14787 897 aaKnown RBP9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 RAD21O60216 631 aa9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 PEX10O60683 326 aa9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 PLEKHA8P1O95397 391 aa9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 NDUFB10O96000 172 aa9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 TFRCP02786 760 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms