RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 KLHDC4Q8TBB5 520 aa13.75□□□□□ -0.21
HDLBP-214ENST00000427183 MMS19Q96T76 1030 aa13.75□□□□□ -0.21
HDLBP-214ENST00000427183 HECW2Q9P2P5 1572 aa13.75□□□□□ -0.21
HDLBP-214ENST00000427183 ZNF521Q96K83 1311 aa13.75□□□□□ -0.21
HDLBP-214ENST00000427183 JAK2O60674 1132 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 LRRC59Q96AG4 307 aaKnown RBP13.74□□□□□ -0.21
HDLBP-214ENST00000427183 FGD4Q96M96 766 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 ARHGEF10LQ9HCE6 1279 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 INTUQ9ULD6 942 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 SUFUQ9UMX1 484 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 CCDC68Q9H2F9 335 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 VPS54Q9P1Q0 977 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 ANGEL1Q9UNK9 670 aaKnown RBP13.74□□□□□ -0.21
HDLBP-214ENST00000427183 SPDYE2BA6NHP3 402 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 SYF2O95926 243 aaKnown RBP13.74□□□□□ -0.21
HDLBP-214ENST00000427183 SPDYE6P0CI01 402 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 YWHAGP61981 247 aaKnown RBP eCLIP13.74□□□□□ -0.21
HDLBP-214ENST00000427183 ZBTB41Q5SVQ8 909 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 NBPF14Q5TI25 921 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 SH2D4AQ9H788 454 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 ZC4H2Q9NQZ6 224 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 HYOU1Q9Y4L1 999 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 PARP3Q9Y6F1 533 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 PALM3A6NDB9 673 aaPredicted RBP13.74□□□□□ -0.21
HDLBP-214ENST00000427183 ATF2P15336 505 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 TMEM259Q4ZIN3 620 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 TMEM87BQ96K49 555 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 SCHIP1Q9P0W5 487 aaPredicted RBP13.74□□□□□ -0.21
HDLBP-214ENST00000427183 G3BP2Q9UN86 482 aaKnown RBP13.74□□□□□ -0.21
HDLBP-214ENST00000427183 INO80Q9ULG1 1556 aaPredicted RBP13.74□□□□□ -0.21
HDLBP-214ENST00000427183 A0A1W2PP64 1363 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 FAM102BQ5T8I3 360 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 METTL13Q8N6R0 699 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 LINS1Q8NG48 757 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 LARSQ9P2J5 1176 aaKnown RBP13.74□□□□□ -0.21
HDLBP-214ENST00000427183 SFMBT1Q9UHJ3 866 aa13.74□□□□□ -0.21
HDLBP-214ENST00000427183 KCNJ18B7U540 433 aa13.73□□□□□ -0.21
HDLBP-214ENST00000427183 TCP10Q12799 353 aa13.73□□□□□ -0.21
HDLBP-214ENST00000427183 KCNJ12Q14500 433 aa13.73□□□□□ -0.21
HDLBP-214ENST00000427183 FAM133BQ5BKY9 247 aaKnown RBP13.73□□□□□ -0.21
HDLBP-214ENST00000427183 TRIM58Q8NG06 486 aa13.73□□□□□ -0.21
HDLBP-214ENST00000427183 RNF17Q9BXT8 1623 aaKnown RBP13.73□□□□□ -0.21
HDLBP-214ENST00000427183 KRT40Q6A162 431 aa13.73□□□□□ -0.21
HDLBP-214ENST00000427183 GRK7Q8WTQ7 553 aa13.73□□□□□ -0.21
HDLBP-214ENST00000427183 ABCF3Q9NUQ8 709 aa13.73□□□□□ -0.21
HDLBP-214ENST00000427183 TFCP2L1Q9NZI6 479 aa13.73□□□□□ -0.21
HDLBP-214ENST00000427183 RAD50Q92878 1312 aa13.73□□□□□ -0.21
HDLBP-214ENST00000427183 SEC31AO94979 1220 aaKnown RBP13.73□□□□□ -0.21
HDLBP-214ENST00000427183 GUCY2DQ02846 1103 aa13.73□□□□□ -0.21
HDLBP-214ENST00000427183 HSP90AA5PQ58FG0 334 aa13.73□□□□□ -0.21
HDLBP-214ENST00000427183 CMTR1Q8N1G2 835 aaKnown RBP13.73□□□□□ -0.21
HDLBP-214ENST00000427183 NUCKS1Q9H1E3 243 aaKnown RBP13.73□□□□□ -0.21
HDLBP-214ENST00000427183 ZNF148Q9UQR1 794 aa13.73□□□□□ -0.21
HDLBP-214ENST00000427183 COBLO75128 1261 aa13.73□□□□□ -0.21
HDLBP-214ENST00000427183 RNF8O76064 485 aa13.73□□□□□ -0.21
HDLBP-214ENST00000427183 DNM2P50570 870 aa13.73□□□□□ -0.21
HDLBP-214ENST00000427183 SH3BGRP55822 239 aaPredicted RBP13.73□□□□□ -0.21
HDLBP-214ENST00000427183 ANKRD20A4Q4UJ75 823 aa13.73□□□□□ -0.21
HDLBP-214ENST00000427183 ANKRD20A8PQ5CZ79 823 aa13.73□□□□□ -0.21
HDLBP-214ENST00000427183 ANKRD20A2Q5SQ80 823 aa13.73□□□□□ -0.21
HDLBP-214ENST00000427183 ANKRD20A1Q5TYW2 823 aa13.73□□□□□ -0.21
HDLBP-214ENST00000427183 TRMT10CQ7L0Y3 403 aaKnown RBP13.73□□□□□ -0.21
HDLBP-214ENST00000427183 ZMYND10O75800 440 aa13.72□□□□□ -0.21
HDLBP-214ENST00000427183 SLC4A1P02730 911 aa13.72□□□□□ -0.21
HDLBP-214ENST00000427183 CEBPAP49715 358 aaPredicted RBP13.72□□□□□ -0.21
HDLBP-214ENST00000427183 BRDTQ58F21 947 aaPredicted RBP13.72□□□□□ -0.21
HDLBP-214ENST00000427183 CCDC84Q86UT8 332 aaPredicted RBP13.72□□□□□ -0.21
HDLBP-214ENST00000427183 ANKRD35Q8N283 1001 aa13.72□□□□□ -0.21
HDLBP-214ENST00000427183 ANKRD13CQ8N6S4 541 aa13.72□□□□□ -0.21
HDLBP-214ENST00000427183 MRFAP1L1Q96HT8 127 aa13.72□□□□□ -0.21
HDLBP-214ENST00000427183 SPATA17Q96L03 361 aa13.72□□□□□ -0.21
HDLBP-214ENST00000427183 ANKRD2Q9GZV1 360 aa13.72□□□□□ -0.21
HDLBP-214ENST00000427183 ZNF215Q9UL58 517 aaPredicted RBP13.72□□□□□ -0.21
HDLBP-214ENST00000427183 DENND2AQ9ULE3 1009 aa13.72□□□□□ -0.21
HDLBP-214ENST00000427183 UFL1O94874 794 aa13.72□□□□□ -0.21
HDLBP-214ENST00000427183 SESTD1Q86VW0 696 aa13.72□□□□□ -0.21
HDLBP-214ENST00000427183 TRMT2AQ8IZ69 625 aaKnown RBP13.72□□□□□ -0.21
HDLBP-214ENST00000427183 FAM89AQ96GI7 184 aa13.72□□□□□ -0.21
HDLBP-214ENST00000427183 ZNF594Q96JF6 807 aaPredicted RBP13.72□□□□□ -0.21
HDLBP-214ENST00000427183 SLC1A4P43007 532 aa13.72□□□□□ -0.21
HDLBP-214ENST00000427183 TRPC6Q9Y210 931 aa13.72□□□□□ -0.21
HDLBP-214ENST00000427183 GPAA1O43292 621 aa13.72□□□□□ -0.21
HDLBP-214ENST00000427183 BFSP1Q12934 665 aa13.72□□□□□ -0.21
HDLBP-214ENST00000427183 IVNS1ABPQ9Y6Y0 642 aa13.72□□□□□ -0.21
HDLBP-214ENST00000427183 EEF1DP29692 281 aaKnown RBP13.72□□□□□ -0.21
HDLBP-214ENST00000427183 HADHQ16836 314 aaKnown RBP13.72□□□□□ -0.21
HDLBP-214ENST00000427183 MTHFSDQ2M296 383 aaKnown RBP13.72□□□□□ -0.21
HDLBP-214ENST00000427183 PPP2R2CQ9Y2T4 447 aa13.72□□□□□ -0.21
HDLBP-214ENST00000427183 YTHDC2Q9H6S0 1430 aaKnown RBP13.72□□□□□ -0.21
HDLBP-214ENST00000427183 H7C0C1 242 aa13.71□□□□□ -0.21
HDLBP-214ENST00000427183 XRCC5P13010 732 aaKnown RBP13.71□□□□□ -0.21
HDLBP-214ENST00000427183 POLD1P28340 1107 aa13.71□□□□□ -0.21
HDLBP-214ENST00000427183 ATP5OP48047 213 aa13.71□□□□□ -0.21
HDLBP-214ENST00000427183 POLR2FP61218 127 aaKnown RBP13.71□□□□□ -0.21
HDLBP-214ENST00000427183 PDE1BQ01064 536 aa13.71□□□□□ -0.21
HDLBP-214ENST00000427183 LLGL1Q15334 1064 aa13.71□□□□□ -0.21
HDLBP-214ENST00000427183 NUDCD3Q8IVD9 361 aa13.71□□□□□ -0.21
HDLBP-214ENST00000427183 RTCBQ9Y3I0 505 aaKnown RBP13.71□□□□□ -0.21
HDLBP-214ENST00000427183 ANGPTL3Q9Y5C1 460 aa13.71□□□□□ -0.21
HDLBP-214ENST00000427183 SOS1Q07889 1333 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms