RNA–Protein interactions for RNA: ENST00000426909.1

SYNC-204, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-204ENST00000426909 GCLCP48506 637 aaPredicted RBP12.66□□□□□ -0.38
SYNC-204ENST00000426909 GUCY1B3Q02153 619 aa12.66□□□□□ -0.38
SYNC-204ENST00000426909 ICA1Q05084 483 aa12.66□□□□□ -0.38
SYNC-204ENST00000426909 SAFBQ15424 915 aaKnown RBP eCLIP12.66□□□□□ -0.38
SYNC-204ENST00000426909 ZYXQ15942 572 aaKnown RBP12.66□□□□□ -0.38
SYNC-204ENST00000426909 MYSM1Q5VVJ2 828 aa12.66□□□□□ -0.38
SYNC-204ENST00000426909 RBM43Q6ZSC3 357 aaKnown RBP12.66□□□□□ -0.38
SYNC-204ENST00000426909 OTOP1Q7RTM1 612 aa12.66□□□□□ -0.38
SYNC-204ENST00000426909 ZNF444Q8N0Y2 327 aaPredicted RBP12.66□□□□□ -0.38
SYNC-204ENST00000426909 ENAHQ8N8S7 591 aaPredicted RBP12.66□□□□□ -0.38
SYNC-204ENST00000426909 PGBD1Q96JS3 809 aa12.66□□□□□ -0.38
SYNC-204ENST00000426909 C12orf42Q96LP6 360 aa12.66□□□□□ -0.38
SYNC-204ENST00000426909 USP28Q96RU2 1077 aa12.66□□□□□ -0.38
SYNC-204ENST00000426909 MAP3K14Q99558 947 aa12.66□□□□□ -0.38
SYNC-204ENST00000426909 RNF26Q9BY78 433 aaPredicted RBP12.66□□□□□ -0.38
SYNC-204ENST00000426909 ASCC2Q9H1I8 757 aaPredicted RBP12.66□□□□□ -0.38
SYNC-204ENST00000426909 CLSTN2Q9H4D0 955 aa12.66□□□□□ -0.38
SYNC-204ENST00000426909 KANSL2Q9H9L4 492 aa12.66□□□□□ -0.38
SYNC-204ENST00000426909 EMILIN3Q9NT22 766 aa12.66□□□□□ -0.38
SYNC-204ENST00000426909 MYH8P13535 1937 aa12.65□□□□□ -0.38
SYNC-204ENST00000426909 BCRP11274 1271 aa12.65□□□□□ -0.38
SYNC-204ENST00000426909 RASA1P20936 1047 aa12.65□□□□□ -0.38
SYNC-204ENST00000426909 U2AF2P26368 475 aaKnown RBP eCLIP12.65□□□□□ -0.38
SYNC-204ENST00000426909 KRT40Q6A162 431 aa12.65□□□□□ -0.38
SYNC-204ENST00000426909 ADALQ6DHV7 355 aa12.65□□□□□ -0.38
SYNC-204ENST00000426909 FBXO46Q6PJ61 603 aaPredicted RBP12.65□□□□□ -0.38
SYNC-204ENST00000426909 CCDC73Q6ZRK6 1079 aa12.65□□□□□ -0.38
SYNC-204ENST00000426909 DGKHQ86XP1 1220 aa12.65□□□□□ -0.38
SYNC-204ENST00000426909 RAB11FIP4Q86YS3 637 aa12.65□□□□□ -0.38
SYNC-204ENST00000426909 STK11IPQ8N1F8 1099 aa12.65□□□□□ -0.38
SYNC-204ENST00000426909 ACER1Q8TDN7 264 aa12.65□□□□□ -0.38
SYNC-204ENST00000426909 ANKS1AQ92625 1134 aa12.65□□□□□ -0.38
SYNC-204ENST00000426909 ZKSCAN3Q9BRR0 538 aa12.65□□□□□ -0.38
SYNC-204ENST00000426909 FUCA2Q9BTY2 467 aa12.65□□□□□ -0.38
SYNC-204ENST00000426909 SLC26A6Q9BXS9 759 aa12.65□□□□□ -0.38
SYNC-204ENST00000426909 TNMDQ9H2S6 317 aa12.65□□□□□ -0.38
SYNC-204ENST00000426909 USP17L15C9J2P7 530 aa12.64□□□□□ -0.39
SYNC-204ENST00000426909 USP17L13C9JLJ4 530 aa12.64□□□□□ -0.39
SYNC-204ENST00000426909 USP17L11C9JVI0 530 aa12.64□□□□□ -0.39
SYNC-204ENST00000426909 USP17L18D6R9N7 530 aa12.64□□□□□ -0.39
SYNC-204ENST00000426909 USP17L22D6RA61 530 aa12.64□□□□□ -0.39
SYNC-204ENST00000426909 USP17L17D6RBQ6 530 aa12.64□□□□□ -0.39
SYNC-204ENST00000426909 USP17L19D6RCP7 530 aa12.64□□□□□ -0.39
SYNC-204ENST00000426909 USP17L20D6RJB6 530 aa12.64□□□□□ -0.39
SYNC-204ENST00000426909 LIG1P18858 919 aa12.64□□□□□ -0.39
SYNC-204ENST00000426909 RXRAP19793 462 aa12.64□□□□□ -0.39
SYNC-204ENST00000426909 FOSBP53539 338 aa12.64□□□□□ -0.39
SYNC-204ENST00000426909 AKAP17AQ02040 695 aaKnown RBP12.64□□□□□ -0.39
SYNC-204ENST00000426909 USP17L24Q0WX57 530 aa12.64□□□□□ -0.39
SYNC-204ENST00000426909 GNL2Q13823 731 aaKnown RBP12.64□□□□□ -0.39
SYNC-204ENST00000426909 STK38Q15208 465 aa12.64□□□□□ -0.39
SYNC-204ENST00000426909 SF3A1Q15459 793 aaKnown RBP12.64□□□□□ -0.39
SYNC-204ENST00000426909 HS1BP3Q53T59 392 aa12.64□□□□□ -0.39
SYNC-204ENST00000426909 ANO1Q5XXA6 986 aa12.64□□□□□ -0.39
SYNC-204ENST00000426909 NBPF11Q86T75 865 aa12.64□□□□□ -0.39
SYNC-204ENST00000426909 LINC00301Q8NCQ3 95 aa12.64□□□□□ -0.39
SYNC-204ENST00000426909 GTF3C2Q8WUA4 911 aaPredicted RBP12.64□□□□□ -0.39
SYNC-204ENST00000426909 LPAR1Q92633 364 aa12.64□□□□□ -0.39
SYNC-204ENST00000426909 PHKBQ93100 1093 aa12.64□□□□□ -0.39
SYNC-204ENST00000426909 TRIM44Q96DX7 344 aaPredicted RBP12.64□□□□□ -0.39
SYNC-204ENST00000426909 FOXP1Q9H334 677 aaPredicted RBP12.64□□□□□ -0.39
SYNC-204ENST00000426909 TCP11L1Q9NUJ3 509 aa12.64□□□□□ -0.39
SYNC-204ENST00000426909 DACT1Q9NYF0 836 aa12.64□□□□□ -0.39
SYNC-204ENST00000426909 A0A1W2PRG0 241 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 TSPY2A6NKD2 308 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 PRPF3O43395 683 aaKnown RBP12.63□□□□□ -0.39
SYNC-204ENST00000426909 PRDM1O75626 825 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 CAPN15O75808 1086 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 VCAM1P19320 739 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 HOXD10P28358 340 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 KIF5BP33176 963 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 PSMC4P43686 418 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 ME1P48163 572 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 PRMT2P55345 433 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 FCGRTP55899 365 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 ATP2B2Q01814 1243 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 FAM160A1Q05DH4 1040 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 TROAPQ12815 778 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 FAM110CQ1W6H9 321 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 CCAR1Q8IX12 1150 aaKnown RBP12.63□□□□□ -0.39
SYNC-204ENST00000426909 CCDC144CPQ8IYA2 1237 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 ANKRD13CQ8N6S4 541 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 CTCFLQ8NI51 663 aaPredicted RBP12.63□□□□□ -0.39
SYNC-204ENST00000426909 NUP133Q8WUM0 1156 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 MRPS27Q92552 414 aaKnown RBP12.63□□□□□ -0.39
SYNC-204ENST00000426909 PDLIM2Q96JY6 352 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 MYL10Q9BUA6 226 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 GOPCQ9HD26 462 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 PTPN22Q9Y2R2 807 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 TMX2Q9Y320 296 aa12.63□□□□□ -0.39
SYNC-204ENST00000426909 CCDC85CA6NKD9 419 aa12.62□□□□□ -0.39
SYNC-204ENST00000426909 SPTLC2O15270 562 aa12.62□□□□□ -0.39
SYNC-204ENST00000426909 PPP6R2O75170 966 aa12.62□□□□□ -0.39
SYNC-204ENST00000426909 MMP1P03956 469 aa12.62□□□□□ -0.39
SYNC-204ENST00000426909 TSPY3P0CV98 308 aa12.62□□□□□ -0.39
SYNC-204ENST00000426909 TSPY8P0CW00 308 aa12.62□□□□□ -0.39
SYNC-204ENST00000426909 EEF2P13639 858 aaKnown RBP12.62□□□□□ -0.39
SYNC-204ENST00000426909 GNAQP50148 359 aa12.62□□□□□ -0.39
SYNC-204ENST00000426909 HERVK_113P62684 666 aa12.62□□□□□ -0.39
SYNC-204ENST00000426909 SLC39A14Q15043 492 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms