RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 ZNF444Q8N0Y2 327 aaPredicted RBP15.05■□□□□ 0
USP42-203ENST00000426246 TIGD1Q96MW7 591 aa15.05■□□□□ 0
USP42-203ENST00000426246 TUBE1Q9UJT0 475 aa15.05■□□□□ 0
USP42-203ENST00000426246 CDK5RAP2Q96SN8 1893 aa15.05■□□□□ -0
USP42-203ENST00000426246 SASH3O75995 380 aa15.05■□□□□ -0
USP42-203ENST00000426246 TSPY3P0CV98 308 aa15.05■□□□□ -0
USP42-203ENST00000426246 TSPY8P0CW00 308 aa15.05■□□□□ -0
USP42-203ENST00000426246 TXKP42681 527 aa15.05■□□□□ -0
USP42-203ENST00000426246 PLCD1P51178 756 aa15.05■□□□□ -0
USP42-203ENST00000426246 RBM17Q96I25 401 aaKnown RBP15.05■□□□□ -0
USP42-203ENST00000426246 FHOD1Q9Y613 1164 aa15.05■□□□□ -0
USP42-203ENST00000426246 CTAGE15A4D2H0 777 aa15.05■□□□□ -0
USP42-203ENST00000426246 CTAGE8P0CG41 777 aa15.05■□□□□ -0
USP42-203ENST00000426246 KLK7P49862 253 aa15.05■□□□□ -0
USP42-203ENST00000426246 LONRF2Q1L5Z9 754 aa15.05■□□□□ -0
USP42-203ENST00000426246 CTAGE6Q86UF2 777 aa15.05■□□□□ -0
USP42-203ENST00000426246 CTAGE4Q8IX94 777 aa15.05■□□□□ -0
USP42-203ENST00000426246 RIN2Q8WYP3 895 aaPredicted RBP15.05■□□□□ -0
USP42-203ENST00000426246 BRIP1Q9BX63 1249 aa15.05■□□□□ -0
USP42-203ENST00000426246 B4DLN1 442 aa15.04■□□□□ -0
USP42-203ENST00000426246 SRGNP10124 158 aa15.04■□□□□ -0
USP42-203ENST00000426246 DPYDQ12882 1025 aa15.04■□□□□ -0
USP42-203ENST00000426246 KRT31Q15323 416 aa15.04■□□□□ -0
USP42-203ENST00000426246 CLEC10AQ8IUN9 316 aa15.04■□□□□ -0
USP42-203ENST00000426246 SMCR8Q8TEV9 937 aaPredicted RBP15.04■□□□□ -0
USP42-203ENST00000426246 CDK5RAP3Q96JB5 506 aa15.04■□□□□ -0
USP42-203ENST00000426246 ZNF646O15015 1829 aaPredicted RBP15.04■□□□□ -0
USP42-203ENST00000426246 WDR19Q8NEZ3 1342 aa15.04■□□□□ -0
USP42-203ENST00000426246 TADA3O75528 432 aa15.04■□□□□ -0
USP42-203ENST00000426246 CACNB1Q02641 598 aaPredicted RBP15.04■□□□□ -0
USP42-203ENST00000426246 MORC3Q14149 939 aa15.04■□□□□ -0
USP42-203ENST00000426246 CCDC96Q2M329 555 aa15.04■□□□□ -0
USP42-203ENST00000426246 TDRD12Q587J7 1177 aaKnown RBP15.04■□□□□ -0
USP42-203ENST00000426246 TAF3Q5VWG9 929 aa15.04■□□□□ -0
USP42-203ENST00000426246 SRBD1Q8N5C6 995 aaKnown RBP15.04■□□□□ -0
USP42-203ENST00000426246 CRACR2AQ9BSW2 395 aa15.04■□□□□ -0
USP42-203ENST00000426246 HPSEQ9Y251 543 aa15.04■□□□□ -0
USP42-203ENST00000426246 KCNJ18B7U540 433 aa15.04■□□□□ -0
USP42-203ENST00000426246 RNF225M0QZC1 329 aaPredicted RBP15.04■□□□□ -0
USP42-203ENST00000426246 MPHOSPH10O00566 681 aaKnown RBP15.04■□□□□ -0
USP42-203ENST00000426246 BBOX1O75936 387 aa15.04■□□□□ -0
USP42-203ENST00000426246 KCNJ12Q14500 433 aa15.04■□□□□ -0
USP42-203ENST00000426246 EZH2Q15910 746 aaKnown RBP15.04■□□□□ -0
USP42-203ENST00000426246 FLAD1Q8NFF5 587 aa15.04■□□□□ -0
USP42-203ENST00000426246 SMARCAL1Q9NZC9 954 aa15.04■□□□□ -0
USP42-203ENST00000426246 POLLQ9UGP5 575 aa15.04■□□□□ -0
USP42-203ENST00000426246 SRPRBQ9Y5M8 271 aaKnown RBP15.04■□□□□ -0
USP42-203ENST00000426246 TECP42680 631 aa15.03■□□□□ -0
USP42-203ENST00000426246 LIFRP42702 1097 aa15.03■□□□□ -0
USP42-203ENST00000426246 MECOMQ03112 1051 aa15.03■□□□□ -0
USP42-203ENST00000426246 GABPB1Q06547 395 aaPredicted RBP15.03■□□□□ -0
USP42-203ENST00000426246 PAK1Q13153 545 aa15.03■□□□□ -0
USP42-203ENST00000426246 UTP14CQ5TAP6 766 aaKnown RBP15.03■□□□□ -0
USP42-203ENST00000426246 MED15Q96RN5 788 aa15.03■□□□□ -0
USP42-203ENST00000426246 FAM107BQ9H098 131 aa15.03■□□□□ -0
USP42-203ENST00000426246 SLC39A2Q9NP94 309 aa15.03■□□□□ -0
USP42-203ENST00000426246 BIN2Q9UBW5 565 aaPredicted RBP15.03■□□□□ -0
USP42-203ENST00000426246 STX10O60499 249 aa15.03■□□□□ -0
USP42-203ENST00000426246 CCNT1O60563 726 aaKnown RBP15.03■□□□□ -0
USP42-203ENST00000426246 NAPAP54920 295 aa15.03■□□□□ -0
USP42-203ENST00000426246 LRRC41Q15345 812 aa15.03■□□□□ -0
USP42-203ENST00000426246 ABCB6Q9NP58 842 aa15.03■□□□□ -0
USP42-203ENST00000426246 UTRNP46939 3433 aa15.03■□□□□ -0
USP42-203ENST00000426246 EFCAB8A8MWE9 144 aa15.03■□□□□ -0
USP42-203ENST00000426246 MMP10P09238 476 aa15.03■□□□□ -0
USP42-203ENST00000426246 IKQ13123 557 aaPredicted RBP15.03■□□□□ -0
USP42-203ENST00000426246 SPATA1Q5VX52 437 aa15.03■□□□□ -0
USP42-203ENST00000426246 TMTC2Q8N394 836 aa15.03■□□□□ -0
USP42-203ENST00000426246 FBXO41Q8TF61 875 aa15.03■□□□□ -0
USP42-203ENST00000426246 ZNHIT6Q9NWK9 470 aaKnown RBP15.03■□□□□ -0
USP42-203ENST00000426246 LUC7L2Q9Y383 392 aaKnown RBP15.03■□□□□ -0
USP42-203ENST00000426246 FRMPD2Q68DX3 1309 aaPredicted RBP15.02■□□□□ -0
USP42-203ENST00000426246 RIMBP2O15034 1052 aa15.02■□□□□ -0
USP42-203ENST00000426246 CLSTN1O94985 981 aa15.02■□□□□ -0
USP42-203ENST00000426246 GNAT2P19087 354 aa15.02■□□□□ -0
USP42-203ENST00000426246 TBC1D8BQ0IIM8 1120 aa15.02■□□□□ -0
USP42-203ENST00000426246 KANK3Q6NY19 840 aa15.02■□□□□ -0
USP42-203ENST00000426246 CC2D1AQ6P1N0 951 aaPredicted RBP15.02■□□□□ -0
USP42-203ENST00000426246 DTHD1Q6ZMT9 781 aa15.02■□□□□ -0
USP42-203ENST00000426246 KRT26Q7Z3Y9 468 aa15.02■□□□□ -0
USP42-203ENST00000426246 NLRC4Q9NPP4 1024 aa15.02■□□□□ -0
USP42-203ENST00000426246 FAN1Q9Y2M0 1017 aa15.02■□□□□ -0
USP42-203ENST00000426246 GRIK5Q16478 980 aa15.02□□□□□ -0.01
USP42-203ENST00000426246 LEKR1Q6ZMV7 388 aa15.02□□□□□ -0.01
USP42-203ENST00000426246 CSGALNACT2Q8N6G5 542 aa15.02□□□□□ -0.01
USP42-203ENST00000426246 NOA1Q8NC60 698 aaKnown RBP15.02□□□□□ -0.01
USP42-203ENST00000426246 ENOX1Q8TC92 643 aaKnown RBP15.02□□□□□ -0.01
USP42-203ENST00000426246 CRNKL1Q9BZJ0 848 aaKnown RBP15.02□□□□□ -0.01
USP42-203ENST00000426246 DUSP10Q9Y6W6 482 aa15.02□□□□□ -0.01
USP42-203ENST00000426246 ECM29Q5VYK3 1845 aa15.02□□□□□ -0.01
USP42-203ENST00000426246 ZNF185O15231 689 aa15.02□□□□□ -0.01
USP42-203ENST00000426246 ACTN4O43707 911 aaKnown RBP15.02□□□□□ -0.01
USP42-203ENST00000426246 PRCPP42785 496 aa15.02□□□□□ -0.01
USP42-203ENST00000426246 PDE4DQ08499 809 aa15.02□□□□□ -0.01
USP42-203ENST00000426246 SPTY2D1Q68D10 685 aaPredicted RBP15.02□□□□□ -0.01
USP42-203ENST00000426246 FOXP1Q9H334 677 aaPredicted RBP15.02□□□□□ -0.01
USP42-203ENST00000426246 ADGRG1Q9Y653 693 aa15.02□□□□□ -0.01
USP42-203ENST00000426246 MYH15Q9Y2K3 1946 aa15.01□□□□□ -0.01
USP42-203ENST00000426246 DDX60LQ5H9U9 1706 aaKnown RBP15.01□□□□□ -0.01
USP42-203ENST00000426246 SLURP2P0DP57 97 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms