RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 Q3C1V9 767 aa18.07■□□□□ 0.48
SHOX2-202ENST00000425436 CHURC1Q8WUH1 139 aa18.07■□□□□ 0.48
SHOX2-202ENST00000425436 GZF1Q9H116 711 aaPredicted RBP18.07■□□□□ 0.48
SHOX2-202ENST00000425436 BTBD7Q9P203 1132 aa18.07■□□□□ 0.48
SHOX2-202ENST00000425436 MAD2L2Q9UI95 211 aa18.07■□□□□ 0.48
SHOX2-202ENST00000425436 COL11A1P12107 1806 aaPredicted RBP18.06■□□□□ 0.48
SHOX2-202ENST00000425436 VPS37CA5D8V6 355 aaPredicted RBP18.06■□□□□ 0.48
SHOX2-202ENST00000425436 HSPA8P11142 646 aaKnown RBP18.06■□□□□ 0.48
SHOX2-202ENST00000425436 BCRP11274 1271 aa18.06■□□□□ 0.48
SHOX2-202ENST00000425436 GCLCP48506 637 aaPredicted RBP18.06■□□□□ 0.48
SHOX2-202ENST00000425436 GRM4Q14833 912 aa18.06■□□□□ 0.48
SHOX2-202ENST00000425436 SYNE3Q6ZMZ3 975 aa18.06■□□□□ 0.48
SHOX2-202ENST00000425436 SYAP1Q96A49 352 aaPredicted RBP18.06■□□□□ 0.48
SHOX2-202ENST00000425436 ZSCAN16Q9H4T2 348 aaPredicted RBP18.06■□□□□ 0.48
SHOX2-202ENST00000425436 PRR12Q9ULL5 1215 aa18.06■□□□□ 0.48
SHOX2-202ENST00000425436 PALM3A6NDB9 673 aaPredicted RBP18.05■□□□□ 0.48
SHOX2-202ENST00000425436 VWA5AO00534 786 aa18.05■□□□□ 0.48
SHOX2-202ENST00000425436 CNMDO75829 334 aa18.05■□□□□ 0.48
SHOX2-202ENST00000425436 LBX1P52954 281 aa18.05■□□□□ 0.48
SHOX2-202ENST00000425436 GPATCH4Q5T3I0 446 aaKnown RBP18.05■□□□□ 0.48
SHOX2-202ENST00000425436 APOA5Q6Q788 366 aa18.05■□□□□ 0.48
SHOX2-202ENST00000425436 FAM160B2Q86V87 743 aa18.05■□□□□ 0.48
SHOX2-202ENST00000425436 MICU3Q86XE3 530 aa18.05■□□□□ 0.48
SHOX2-202ENST00000425436 ZNF296Q8WUU4 475 aaPredicted RBP18.05■□□□□ 0.48
SHOX2-202ENST00000425436 VAT1LQ9HCJ6 419 aa18.05■□□□□ 0.48
SHOX2-202ENST00000425436 ADAMTS5Q9UNA0 930 aa18.05■□□□□ 0.48
SHOX2-202ENST00000425436 CASP8AP2Q9UKL3 1982 aa18.05■□□□□ 0.48
SHOX2-202ENST00000425436 KLRF2D3W0D1 207 aa18.04■□□□□ 0.48
SHOX2-202ENST00000425436 PLA2G6O60733 806 aa18.04■□□□□ 0.48
SHOX2-202ENST00000425436 DDAH1O94760 285 aa18.04■□□□□ 0.48
SHOX2-202ENST00000425436 SP3Q02447 781 aa18.04■□□□□ 0.48
SHOX2-202ENST00000425436 PLS1Q14651 629 aa18.04■□□□□ 0.48
SHOX2-202ENST00000425436 TMEM132BQ14DG7 1078 aa18.04■□□□□ 0.48
SHOX2-202ENST00000425436 ASPRV1Q53RT3 343 aa18.04■□□□□ 0.48
SHOX2-202ENST00000425436 SYDE2Q5VT97 1194 aa18.04■□□□□ 0.48
SHOX2-202ENST00000425436 BTNL9Q6UXG8 535 aa18.04■□□□□ 0.48
SHOX2-202ENST00000425436 LBX2Q6XYB7 198 aa18.04■□□□□ 0.48
SHOX2-202ENST00000425436 GPRC5AQ8NFJ5 357 aa18.04■□□□□ 0.48
SHOX2-202ENST00000425436 RABGAP1Q9Y3P9 1069 aa18.04■□□□□ 0.48
SHOX2-202ENST00000425436 BAZ2BQ9UIF8 2168 aaKnown RBP18.04■□□□□ 0.48
SHOX2-202ENST00000425436 MYPNQ86TC9 1320 aa18.04■□□□□ 0.48
SHOX2-202ENST00000425436 FSD2A1L4K1 749 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 H3BQV1 296 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 ZBTB43O43298 467 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 CTCFP49711 727 aaPredicted RBP18.03■□□□□ 0.48
SHOX2-202ENST00000425436 ERVK-9P63128 1117 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 ERVK-24P63145 666 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 IFFO2Q5TF58 517 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 NBPF11Q86T75 865 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 CPXCR1Q8N123 301 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 CMTR1Q8N1G2 835 aaKnown RBP18.03■□□□□ 0.48
SHOX2-202ENST00000425436 FANCBQ8NB91 859 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 NSUN7Q8NE18 718 aaKnown RBP18.03■□□□□ 0.48
SHOX2-202ENST00000425436 CTCFLQ8NI51 663 aaPredicted RBP18.03■□□□□ 0.48
SHOX2-202ENST00000425436 FKTNO75072 461 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 ZBED4O75132 1171 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 CDKL5O76039 1030 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 CALM1P0DP23 149 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 CALM2P0DP24 149 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 CALM3P0DP25 149 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 KRT85P78386 507 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 CAP1Q01518 475 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 FAM110CQ1W6H9 321 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 CCDC174Q6PII3 467 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 CPLX2Q6PUV4 134 aaKnown RBP18.03■□□□□ 0.48
SHOX2-202ENST00000425436 ADGRF4Q8IZF3 695 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 GTF3C2Q8WUA4 911 aaPredicted RBP18.03■□□□□ 0.48
SHOX2-202ENST00000425436 ARHGAP39Q9C0H5 1083 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 SLC38A10Q9HBR0 1119 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 MORF4L1Q9UBU8 362 aa18.03■□□□□ 0.48
SHOX2-202ENST00000425436 CTDP1Q9Y5B0 961 aaPredicted RBP18.03■□□□□ 0.48
SHOX2-202ENST00000425436 GOLGA8BA8MQT2 603 aa18.02■□□□□ 0.47
SHOX2-202ENST00000425436 PLEKHA8P1O95397 391 aa18.02■□□□□ 0.47
SHOX2-202ENST00000425436 MRE11P49959 708 aa18.02■□□□□ 0.47
SHOX2-202ENST00000425436 UBE2HP62256 183 aa18.02■□□□□ 0.47
SHOX2-202ENST00000425436 SLC35G1Q2M3R5 365 aa18.02■□□□□ 0.47
SHOX2-202ENST00000425436 CCDC82Q8N4S0 544 aa18.02■□□□□ 0.47
SHOX2-202ENST00000425436 REPS2Q8NFH8 660 aa18.02■□□□□ 0.47
SHOX2-202ENST00000425436 CD99L2Q8TCZ2 262 aa18.02■□□□□ 0.47
SHOX2-202ENST00000425436 MAP3K14Q99558 947 aa18.02■□□□□ 0.47
SHOX2-202ENST00000425436 SCAND2PQ9GZW5 306 aaPredicted RBP18.02■□□□□ 0.47
SHOX2-202ENST00000425436 RAVER2Q9HCJ3 691 aaKnown RBP18.02■□□□□ 0.47
SHOX2-202ENST00000425436 HPS5Q9UPZ3 1129 aa18.02■□□□□ 0.47
SHOX2-202ENST00000425436 ZSWIM8A7E2V4 1837 aa18.01■□□□□ 0.47
SHOX2-202ENST00000425436 PTPDC1A2A3K4 754 aa18.01■□□□□ 0.47
SHOX2-202ENST00000425436 GOLGA8AA7E2F4 631 aa18.01■□□□□ 0.47
SHOX2-202ENST00000425436 CPLX1O14810 134 aa18.01■□□□□ 0.47
SHOX2-202ENST00000425436 CTGFP29279 349 aa18.01■□□□□ 0.47
SHOX2-202ENST00000425436 KIF5BP33176 963 aa18.01■□□□□ 0.47
SHOX2-202ENST00000425436 ZNF445P59923 1031 aa18.01■□□□□ 0.47
SHOX2-202ENST00000425436 ATL3Q6DD88 541 aa18.01■□□□□ 0.47
SHOX2-202ENST00000425436 MB21D1Q8N884 522 aa18.01■□□□□ 0.47
SHOX2-202ENST00000425436 PIBF1Q8WXW3 757 aa18.01■□□□□ 0.47
SHOX2-202ENST00000425436 SPATC1LQ9H0A9 340 aa18.01■□□□□ 0.47
SHOX2-202ENST00000425436 PORCNQ9H237 461 aa18.01■□□□□ 0.47
SHOX2-202ENST00000425436 JMJD4Q9H9V9 463 aa18.01■□□□□ 0.47
SHOX2-202ENST00000425436 ZNF214Q9UL59 606 aaPredicted RBP18.01■□□□□ 0.47
SHOX2-202ENST00000425436 SMCHD1A6NHR9 2005 aa18.01■□□□□ 0.47
SHOX2-202ENST00000425436 A0A0G2JMZ2 1700 aa18.01■□□□□ 0.47
SHOX2-202ENST00000425436 CYTH3O43739 400 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms