RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 TRAPPC3LQ5T215 181 aa15.21■□□□□ 0.03
SREBF2-202ENST00000424354 MGARPQ8TDB4 240 aa15.21■□□□□ 0.03
SREBF2-202ENST00000424354 TPCN1Q9ULQ1 816 aa15.21■□□□□ 0.03
SREBF2-202ENST00000424354 KDM3AQ9Y4C1 1321 aa15.21■□□□□ 0.02
SREBF2-202ENST00000424354 CCDC169A6NNP5 214 aa15.21■□□□□ 0.02
SREBF2-202ENST00000424354 SLC8A3P57103 927 aa15.21■□□□□ 0.02
SREBF2-202ENST00000424354 ATP2A3Q93084 1043 aa15.21■□□□□ 0.02
SREBF2-202ENST00000424354 NLRC4Q9NPP4 1024 aa15.21■□□□□ 0.02
SREBF2-202ENST00000424354 FANCLQ9NW38 375 aa15.21■□□□□ 0.02
SREBF2-202ENST00000424354 RIMBP2O15034 1052 aa15.2■□□□□ 0.02
SREBF2-202ENST00000424354 EXOC3O60645 756 aa15.2■□□□□ 0.02
SREBF2-202ENST00000424354 TRIM37O94972 964 aa15.2■□□□□ 0.02
SREBF2-202ENST00000424354 PHBP35232 272 aa15.2■□□□□ 0.02
SREBF2-202ENST00000424354 STAT1P42224 750 aa15.2■□□□□ 0.02
SREBF2-202ENST00000424354 NCAPH2Q6IBW4 605 aa15.2■□□□□ 0.02
SREBF2-202ENST00000424354 ZNF790Q6PG37 636 aa15.2■□□□□ 0.02
SREBF2-202ENST00000424354 DCUN1D2Q6PH85 259 aa15.2■□□□□ 0.02
SREBF2-202ENST00000424354 RNF168Q8IYW5 571 aaPredicted RBP15.2■□□□□ 0.02
SREBF2-202ENST00000424354 TBC1D31Q96DN5 1066 aa15.2■□□□□ 0.02
SREBF2-202ENST00000424354 VCX3AQ9NNX9 186 aa15.2■□□□□ 0.02
SREBF2-202ENST00000424354 PCDHA7Q9UN72 937 aa15.2■□□□□ 0.02
SREBF2-202ENST00000424354 ZNF521Q96K83 1311 aa15.2■□□□□ 0.02
SREBF2-202ENST00000424354 ECM2O94769 699 aaPredicted RBP15.2■□□□□ 0.02
SREBF2-202ENST00000424354 STRN3Q13033 797 aa15.2■□□□□ 0.02
SREBF2-202ENST00000424354 PARP10Q53GL7 1025 aa15.2■□□□□ 0.02
SREBF2-202ENST00000424354 LPIN2Q92539 896 aa15.2■□□□□ 0.02
SREBF2-202ENST00000424354 Q9H521 79 aa15.2■□□□□ 0.02
SREBF2-202ENST00000424354 TYW1Q9NV66 732 aaKnown RBP15.2■□□□□ 0.02
SREBF2-202ENST00000424354 LARSQ9P2J5 1176 aaKnown RBP15.2■□□□□ 0.02
SREBF2-202ENST00000424354 PKP1Q13835 747 aa15.2■□□□□ 0.02
SREBF2-202ENST00000424354 KLHDC4Q8TBB5 520 aa15.2■□□□□ 0.02
SREBF2-202ENST00000424354 SSH3Q8TE77 659 aa15.2■□□□□ 0.02
SREBF2-202ENST00000424354 EPN1Q9Y6I3 576 aaPredicted RBP15.2■□□□□ 0.02
SREBF2-202ENST00000424354 ZMYM6O95789 1325 aa15.2■□□□□ 0.02
SREBF2-202ENST00000424354 GTPBP6O43824 516 aaPredicted RBP15.19■□□□□ 0.02
SREBF2-202ENST00000424354 CCT5P48643 541 aa15.19■□□□□ 0.02
SREBF2-202ENST00000424354 CTDSPL2Q05D32 466 aa15.19■□□□□ 0.02
SREBF2-202ENST00000424354 RILPQ96NA2 401 aa15.19■□□□□ 0.02
SREBF2-202ENST00000424354 ABCC6O95255 1503 aa15.19■□□□□ 0.02
SREBF2-202ENST00000424354 PDE8AO60658 829 aa15.19■□□□□ 0.02
SREBF2-202ENST00000424354 IRX5P78411 483 aaPredicted RBP15.19■□□□□ 0.02
SREBF2-202ENST00000424354 AP1ARQ63HQ0 302 aa15.19■□□□□ 0.02
SREBF2-202ENST00000424354 CCDC89Q8N998 374 aa15.19■□□□□ 0.02
SREBF2-202ENST00000424354 ERBB3P21860 1342 aa15.19■□□□□ 0.02
SREBF2-202ENST00000424354 NELFCDQ8IXH7 590 aa15.19■□□□□ 0.02
SREBF2-202ENST00000424354 U2AF1L4Q8WU68 220 aaKnown RBP15.19■□□□□ 0.02
SREBF2-202ENST00000424354 STAG1Q8WVM7 1258 aa15.19■□□□□ 0.02
SREBF2-202ENST00000424354 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.19■□□□□ 0.02
SREBF2-202ENST00000424354 IKBKBO14920 756 aa15.19■□□□□ 0.02
SREBF2-202ENST00000424354 GCKRQ14397 625 aa15.19■□□□□ 0.02
SREBF2-202ENST00000424354 CCDC13Q8IYE1 715 aa15.19■□□□□ 0.02
SREBF2-202ENST00000424354 PALD1Q9ULE6 856 aa15.19■□□□□ 0.02
SREBF2-202ENST00000424354 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.19■□□□□ 0.02
SREBF2-202ENST00000424354 CHMP2AO43633 222 aa15.19■□□□□ 0.02
SREBF2-202ENST00000424354 GCNT3O95395 438 aa15.19■□□□□ 0.02
SREBF2-202ENST00000424354 SLC27A3Q5K4L6 730 aa15.19■□□□□ 0.02
SREBF2-202ENST00000424354 STAMQ92783 540 aa15.19■□□□□ 0.02
SREBF2-202ENST00000424354 EXOC4Q96A65 974 aa15.19■□□□□ 0.02
SREBF2-202ENST00000424354 MRPL44Q9H9J2 332 aaKnown RBP15.19■□□□□ 0.02
SREBF2-202ENST00000424354 A0A087WUV0 522 aaPredicted RBP15.18■□□□□ 0.02
SREBF2-202ENST00000424354 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.18■□□□□ 0.02
SREBF2-202ENST00000424354 PSMD6Q15008 389 aa15.18■□□□□ 0.02
SREBF2-202ENST00000424354 MYCT1Q8N699 235 aa15.18■□□□□ 0.02
SREBF2-202ENST00000424354 VPS54Q9P1Q0 977 aa15.18■□□□□ 0.02
SREBF2-202ENST00000424354 GJA3Q9Y6H8 435 aa15.18■□□□□ 0.02
SREBF2-202ENST00000424354 MYOCDQ8IZQ8 938 aa15.18■□□□□ 0.02
SREBF2-202ENST00000424354 RBM17Q96I25 401 aaKnown RBP15.18■□□□□ 0.02
SREBF2-202ENST00000424354 RUNDC3BQ96NL0 473 aa15.18■□□□□ 0.02
SREBF2-202ENST00000424354 USTQ9Y2C2 406 aa15.18■□□□□ 0.02
SREBF2-202ENST00000424354 XRCC5P13010 732 aaKnown RBP15.18■□□□□ 0.02
SREBF2-202ENST00000424354 HIBADHP31937 336 aaKnown RBP15.18■□□□□ 0.02
SREBF2-202ENST00000424354 BBOF1Q8ND07 529 aa15.18■□□□□ 0.02
SREBF2-202ENST00000424354 RTEL1Q9NZ71 1219 aa15.18■□□□□ 0.02
SREBF2-202ENST00000424354 CCNL1Q9UK58 526 aaPredicted RBP15.18■□□□□ 0.02
SREBF2-202ENST00000424354 AHDC1Q5TGY3 1603 aaPredicted RBP15.18■□□□□ 0.02
SREBF2-202ENST00000424354 GIPC1O14908 333 aa15.18■□□□□ 0.02
SREBF2-202ENST00000424354 PTH1RQ03431 593 aa15.18■□□□□ 0.02
SREBF2-202ENST00000424354 TRIM68Q6AZZ1 485 aa15.18■□□□□ 0.02
SREBF2-202ENST00000424354 FAM89AQ96GI7 184 aa15.18■□□□□ 0.02
SREBF2-202ENST00000424354 RIC8AQ9NPQ8 531 aa15.18■□□□□ 0.02
SREBF2-202ENST00000424354 SAP30BPQ9UHR5 308 aaKnown RBP15.18■□□□□ 0.02
SREBF2-202ENST00000424354 ZNF532Q9HCE3 1301 aa15.17■□□□□ 0.02
SREBF2-202ENST00000424354 EVI5O60447 810 aa15.17■□□□□ 0.02
SREBF2-202ENST00000424354 NDUFA8P51970 172 aa15.17■□□□□ 0.02
SREBF2-202ENST00000424354 EPHB4P54760 987 aa15.17■□□□□ 0.02
SREBF2-202ENST00000424354 PFDN4Q9NQP4 134 aa15.17■□□□□ 0.02
SREBF2-202ENST00000424354 SPATA31A5Q5VU36 1347 aa15.17■□□□□ 0.02
SREBF2-202ENST00000424354 SPATA31A7Q8IWB4 1347 aa15.17■□□□□ 0.02
SREBF2-202ENST00000424354 LRCH2Q5VUJ6 765 aa15.17■□□□□ 0.02
SREBF2-202ENST00000424354 REXO1Q8N1G1 1221 aaKnown RBP15.17■□□□□ 0.02
SREBF2-202ENST00000424354 BIN2Q9UBW5 565 aaPredicted RBP15.17■□□□□ 0.02
SREBF2-202ENST00000424354 SH3TC1Q8TE82 1336 aa15.17■□□□□ 0.02
SREBF2-202ENST00000424354 RPAINQ86UA6 219 aa15.17■□□□□ 0.02
SREBF2-202ENST00000424354 CCDC197Q8NCU1 140 aa15.17■□□□□ 0.02
SREBF2-202ENST00000424354 BANK1Q8NDB2 785 aa15.17■□□□□ 0.02
SREBF2-202ENST00000424354 TBC1D7Q9P0N9 293 aa15.17■□□□□ 0.02
SREBF2-202ENST00000424354 MROH5Q6ZUA9 1318 aa15.17■□□□□ 0.02
SREBF2-202ENST00000424354 LRRD1A4D1F6 860 aa15.17■□□□□ 0.02
SREBF2-202ENST00000424354 SUN1O94901 812 aa15.17■□□□□ 0.02
SREBF2-202ENST00000424354 ARMC9Q7Z3E5 817 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 648.6 ms