RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 BARHL2Q9NY43 387 aa18.4■□□□□ 0.54
ABCA1-203ENST00000423487 PNMA3Q9UL41 463 aa18.4■□□□□ 0.54
ABCA1-203ENST00000423487 PNMA2Q9UL42 364 aa18.4■□□□□ 0.54
ABCA1-203ENST00000423487 BAZ2BQ9UIF8 2168 aaKnown RBP18.39■□□□□ 0.54
ABCA1-203ENST00000423487 TESPA1A2RU30 521 aaPredicted RBP18.39■□□□□ 0.54
ABCA1-203ENST00000423487 FAM155AB1AL88 458 aaPredicted RBP18.39■□□□□ 0.54
ABCA1-203ENST00000423487 INHBEP58166 350 aa18.39■□□□□ 0.54
ABCA1-203ENST00000423487 WWC2Q6AWC2 1192 aa18.39■□□□□ 0.54
ABCA1-203ENST00000423487 FBXO11Q86XK2 927 aa18.39■□□□□ 0.54
ABCA1-203ENST00000423487 CCDC148Q8NFR7 591 aa18.39■□□□□ 0.54
ABCA1-203ENST00000423487 FBXO18Q8NFZ0 1043 aa18.39■□□□□ 0.54
ABCA1-203ENST00000423487 GPKOWQ92917 476 aaPredicted RBP eCLIP18.39■□□□□ 0.54
ABCA1-203ENST00000423487 ATG4CQ96DT6 458 aa18.39■□□□□ 0.54
ABCA1-203ENST00000423487 ASCC2Q9H1I8 757 aaPredicted RBP18.39■□□□□ 0.54
ABCA1-203ENST00000423487 SLC38A10Q9HBR0 1119 aa18.39■□□□□ 0.54
ABCA1-203ENST00000423487 CHMP5Q9NZZ3 219 aa18.39■□□□□ 0.54
ABCA1-203ENST00000423487 VPS54Q9P1Q0 977 aa18.39■□□□□ 0.54
ABCA1-203ENST00000423487 ADAMTS5Q9UNA0 930 aa18.39■□□□□ 0.54
ABCA1-203ENST00000423487 VPS37CA5D8V6 355 aaPredicted RBP18.39■□□□□ 0.53
ABCA1-203ENST00000423487 RASSF10A6NK89 507 aa18.39■□□□□ 0.53
ABCA1-203ENST00000423487 SPDYE16A6NNV3 312 aaPredicted RBP18.39■□□□□ 0.53
ABCA1-203ENST00000423487 BTBD19C9JJ37 291 aa18.39■□□□□ 0.53
ABCA1-203ENST00000423487 VWA5AO00534 786 aa18.39■□□□□ 0.53
ABCA1-203ENST00000423487 FOSBP53539 338 aa18.39■□□□□ 0.53
ABCA1-203ENST00000423487 SNAP25P60880 206 aa18.39■□□□□ 0.53
ABCA1-203ENST00000423487 DEFB115Q30KQ5 88 aa18.39■□□□□ 0.53
ABCA1-203ENST00000423487 KRT40Q6A162 431 aa18.39■□□□□ 0.53
ABCA1-203ENST00000423487 STXBP3O00186 592 aa18.38■□□□□ 0.53
ABCA1-203ENST00000423487 NAPAP54920 295 aa18.38■□□□□ 0.53
ABCA1-203ENST00000423487 PPP1R18Q6NYC8 613 aa18.38■□□□□ 0.53
ABCA1-203ENST00000423487 CCDC174Q6PII3 467 aa18.38■□□□□ 0.53
ABCA1-203ENST00000423487 MB21D1Q8N884 522 aa18.38■□□□□ 0.53
ABCA1-203ENST00000423487 P2RX7Q99572 595 aaKnown RBP18.38■□□□□ 0.53
ABCA1-203ENST00000423487 PCDHA1Q9Y5I3 950 aa18.38■□□□□ 0.53
ABCA1-203ENST00000423487 WDR33Q9C0J8 1336 aaKnown RBP18.38■□□□□ 0.53
ABCA1-203ENST00000423487 PDHXO00330 501 aa18.37■□□□□ 0.53
ABCA1-203ENST00000423487 PPP1R11O60927 126 aaPredicted RBP18.37■□□□□ 0.53
ABCA1-203ENST00000423487 ICAM1P05362 532 aa18.37■□□□□ 0.53
ABCA1-203ENST00000423487 OAZ1P54368 228 aa18.37■□□□□ 0.53
ABCA1-203ENST00000423487 SREBF2Q12772 1141 aa18.37■□□□□ 0.53
ABCA1-203ENST00000423487 SAFBQ15424 915 aaKnown RBP eCLIP18.37■□□□□ 0.53
ABCA1-203ENST00000423487 OTUD7BQ6GQQ9 843 aa18.37■□□□□ 0.53
ABCA1-203ENST00000423487 LBX2Q6XYB7 198 aa18.37■□□□□ 0.53
ABCA1-203ENST00000423487 COA7Q96BR5 231 aa18.37■□□□□ 0.53
ABCA1-203ENST00000423487 GJB4Q9NTQ9 266 aa18.37■□□□□ 0.53
ABCA1-203ENST00000423487 MTMR6Q9Y217 621 aa18.37■□□□□ 0.53
ABCA1-203ENST00000423487 MMP1P03956 469 aa18.36■□□□□ 0.53
ABCA1-203ENST00000423487 CALML3P27482 149 aa18.36■□□□□ 0.53
ABCA1-203ENST00000423487 NLRP5P59047 1200 aa18.36■□□□□ 0.53
ABCA1-203ENST00000423487 HERVK_113P62684 666 aa18.36■□□□□ 0.53
ABCA1-203ENST00000423487 GUCY1B3Q02153 619 aa18.36■□□□□ 0.53
ABCA1-203ENST00000423487 CYP4F22Q6NT55 531 aa18.36■□□□□ 0.53
ABCA1-203ENST00000423487 FAM43AQ8N2R8 423 aa18.36■□□□□ 0.53
ABCA1-203ENST00000423487 GTF3C2Q8WUA4 911 aaPredicted RBP18.36■□□□□ 0.53
ABCA1-203ENST00000423487 PHF20Q9BVI0 1012 aa18.36■□□□□ 0.53
ABCA1-203ENST00000423487 BRMS1Q9HCU9 246 aa18.36■□□□□ 0.53
ABCA1-203ENST00000423487 ZCCHC17Q9NP64 241 aaKnown RBP18.36■□□□□ 0.53
ABCA1-203ENST00000423487 KCNJ14Q9UNX9 436 aa18.36■□□□□ 0.53
ABCA1-203ENST00000423487 ESYT2A0FGR8 921 aa18.35■□□□□ 0.53
ABCA1-203ENST00000423487 ATP2A1O14983 1001 aa18.35■□□□□ 0.53
ABCA1-203ENST00000423487 BRD1O95696 1058 aa18.35■□□□□ 0.53
ABCA1-203ENST00000423487 NOGQ13253 232 aa18.35■□□□□ 0.53
ABCA1-203ENST00000423487 GRM1Q13255 1194 aa18.35■□□□□ 0.53
ABCA1-203ENST00000423487 PKP1Q13835 747 aa18.35■□□□□ 0.53
ABCA1-203ENST00000423487 USH1GQ495M9 461 aa18.35■□□□□ 0.53
ABCA1-203ENST00000423487 GALNT17Q6IS24 598 aa18.35■□□□□ 0.53
ABCA1-203ENST00000423487 TYW1BQ6NUM6 668 aa18.35■□□□□ 0.53
ABCA1-203ENST00000423487 CPXCR1Q8N123 301 aa18.35■□□□□ 0.53
ABCA1-203ENST00000423487 REPS2Q8NFH8 660 aa18.35■□□□□ 0.53
ABCA1-203ENST00000423487 CAPNS2Q96L46 248 aa18.35■□□□□ 0.53
ABCA1-203ENST00000423487 PTPN18Q99952 460 aa18.35■□□□□ 0.53
ABCA1-203ENST00000423487 RAVER2Q9HCJ3 691 aaKnown RBP18.35■□□□□ 0.53
ABCA1-203ENST00000423487 C6orf50Q9HD87 102 aa18.35■□□□□ 0.53
ABCA1-203ENST00000423487 CCPG1Q9ULG6 757 aa18.35■□□□□ 0.53
ABCA1-203ENST00000423487 MYH6P13533 1939 aa18.35■□□□□ 0.53
ABCA1-203ENST00000423487 ZNF536O15090 1300 aa18.35■□□□□ 0.53
ABCA1-203ENST00000423487 ZSCAN22P10073 491 aaPredicted RBP18.34■□□□□ 0.53
ABCA1-203ENST00000423487 GNA11P29992 359 aa18.34■□□□□ 0.53
ABCA1-203ENST00000423487 SHISA4Q96DD7 197 aa18.34■□□□□ 0.53
ABCA1-203ENST00000423487 PARK7Q99497 189 aaKnown RBP18.34■□□□□ 0.53
ABCA1-203ENST00000423487 ZMYND12Q9H0C1 365 aa18.34■□□□□ 0.53
ABCA1-203ENST00000423487 MRPL11Q9Y3B7 192 aaKnown RBP18.34■□□□□ 0.53
ABCA1-203ENST00000423487 ABCB11O95342 1321 aa18.34■□□□□ 0.53
ABCA1-203ENST00000423487 SMCO2A6NFE2 343 aa18.33■□□□□ 0.53
ABCA1-203ENST00000423487 KIF23Q02241 960 aaPredicted RBP18.33■□□□□ 0.53
ABCA1-203ENST00000423487 TMEM132BQ14DG7 1078 aa18.33■□□□□ 0.53
ABCA1-203ENST00000423487 MCTP1Q6DN14 999 aa18.33■□□□□ 0.53
ABCA1-203ENST00000423487 SMCR8Q8TEV9 937 aaPredicted RBP18.33■□□□□ 0.53
ABCA1-203ENST00000423487 AGBL1Q96MI9 1066 aa18.33■□□□□ 0.53
ABCA1-203ENST00000423487 TEX13BQ9BXU2 312 aa18.33■□□□□ 0.53
ABCA1-203ENST00000423487 GLT8D2Q9H1C3 349 aa18.33■□□□□ 0.53
ABCA1-203ENST00000423487 PCDHA4Q9UN74 947 aa18.33■□□□□ 0.53
ABCA1-203ENST00000423487 RLFQ13129 1914 aa18.33■□□□□ 0.52
ABCA1-203ENST00000423487 CYP2C8P10632 490 aa18.33■□□□□ 0.52
ABCA1-203ENST00000423487 KRT2P35908 639 aa18.33■□□□□ 0.52
ABCA1-203ENST00000423487 STAT3P40763 770 aa18.33■□□□□ 0.52
ABCA1-203ENST00000423487 GNL2Q13823 731 aaKnown RBP18.33■□□□□ 0.52
ABCA1-203ENST00000423487 DIS3L2Q8IYB7 885 aaKnown RBP18.33■□□□□ 0.52
ABCA1-203ENST00000423487 REM2Q8IYK8 340 aaPredicted RBP18.33■□□□□ 0.52
ABCA1-203ENST00000423487 DAGLBQ8NCG7 672 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms