RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 SAR1BQ9Y6B6 198 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 DUSP10Q9Y6W6 482 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 YTHDC2Q9H6S0 1430 aaKnown RBP7.56□□□□□ -1.2
CNOT4-205ENST00000423368 EFCAB5A4FU69 1503 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 ZNF233A6NK53 670 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 AKR1B15C9JRZ8 316 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-205ENST00000423368 GNPATO15228 680 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 HIP1RO75146 1068 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 LUC7L3O95232 432 aaKnown RBP7.56□□□□□ -1.2
CNOT4-205ENST00000423368 RPL13P26373 211 aaKnown RBP7.56□□□□□ -1.2
CNOT4-205ENST00000423368 CDC27P30260 824 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 PDE4BQ07343 736 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 XRCC4Q13426 336 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 MUM1Q2TAK8 710 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 CCDC70Q6NSX1 233 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 TMEM214Q6NUQ4 689 aaKnown RBP7.56□□□□□ -1.2
CNOT4-205ENST00000423368 WDR93Q6P2C0 686 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 SLC43A3Q8NBI5 491 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 CEP70Q8NHQ1 597 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 NMD3Q96D46 503 aaKnown RBP7.56□□□□□ -1.2
CNOT4-205ENST00000423368 AGBL1Q96MI9 1066 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 OSBPL10Q9BXB5 764 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 NDEL1Q9GZM8 345 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 DDX18Q9NVP1 670 aaKnown RBP7.56□□□□□ -1.2
CNOT4-205ENST00000423368 SRCAPQ6ZRS2 3230 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 KIF14Q15058 1648 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 NUTM2FA1L443 756 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 DCDC2CA8MYV0 355 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 F8VZ95 297 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 P4HA2O15460 535 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 TRIM37O94972 964 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 KRT16P08779 473 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 HOXD12P35452 270 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 RCN2Q14257 317 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 PLCB4Q15147 1175 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 FOXB2Q5VYV0 432 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 GRAMD4Q6IC98 578 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 TMEM53Q6P2H8 277 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 MAP7D3Q8IWC1 876 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 IQCF2Q8IXL9 164 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 SLC15A3Q8IY34 581 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 EXOC8Q8IYI6 725 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 KCNN1Q92952 543 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 SLC35B4Q969S0 331 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 ABHD8Q96I13 439 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 NUP88Q99567 741 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-205ENST00000423368 NUP85Q9BW27 656 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 HSD3B7Q9H2F3 369 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 SUGT1Q9Y2Z0 365 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 DAAM1Q9Y4D1 1078 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 CASKIN1Q8WXD9 1431 aa7.56□□□□□ -1.2
CNOT4-205ENST00000423368 TLDC2A0PJX2 215 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 CARNS1A5YM72 827 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 RCN1Q15293 331 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 SEPT7Q16181 437 aaKnown RBP7.55□□□□□ -1.2
CNOT4-205ENST00000423368 CCDC122Q5T0U0 273 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 BLOC1S2Q6QNY1 142 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 YTHDF3Q7Z739 585 aaKnown RBP7.55□□□□□ -1.2
CNOT4-205ENST00000423368 SLC7A5P1Q8MH63 180 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 WDR66Q8TBY9 1149 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 L3MBTL3Q96JM7 780 aaPredicted RBP7.55□□□□□ -1.2
CNOT4-205ENST00000423368 GPR101Q96P66 508 aaPredicted RBP7.55□□□□□ -1.2
CNOT4-205ENST00000423368 SH2B1Q9NRF2 756 aaPredicted RBP7.55□□□□□ -1.2
CNOT4-205ENST00000423368 MKS1Q9NXB0 559 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 ATXN10Q9UBB4 475 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 PHF24Q9UPV7 400 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 PRELID1Q9Y255 219 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 CLIC4Q9Y696 253 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 ADCY9O60503 1353 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 SMARCA4P51532 1647 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 TTLL13PA6NNM8 815 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 IDEP14735 1019 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 PRKAR2BP31323 418 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 KCNJ6P48051 423 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 CARSP49589 748 aaKnown RBP7.55□□□□□ -1.2
CNOT4-205ENST00000423368 HLFQ16534 295 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 DUS1LQ6P1R4 473 aaKnown RBP7.55□□□□□ -1.2
CNOT4-205ENST00000423368 C6orf89Q6UWU4 347 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 GRAMD1CQ8IYS0 662 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 STAG2Q8N3U4 1231 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 OGFOD1Q8N543 542 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 ZNF579Q8NAF0 562 aaKnown RBP7.55□□□□□ -1.2
CNOT4-205ENST00000423368 SELENOSQ9BQE4 189 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 MLXIPLQ9NP71 852 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 HYOU1Q9Y4L1 999 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 NOS1P29475 1434 aa7.55□□□□□ -1.2
CNOT4-205ENST00000423368 PALM3A6NDB9 673 aaPredicted RBP7.54□□□□□ -1.2
CNOT4-205ENST00000423368 SPDYE16A6NNV3 312 aaPredicted RBP7.54□□□□□ -1.2
CNOT4-205ENST00000423368 SLC27A2O14975 620 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 CTNND1O60716 968 aaKnown RBP7.54□□□□□ -1.2
CNOT4-205ENST00000423368 TMCC1O94876 653 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 NLRP12P59046 1061 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 ATP11AP98196 1134 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 RESTQ13127 1097 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 DYNC1I2Q13409 638 aaKnown RBP7.54□□□□□ -1.2
CNOT4-205ENST00000423368 BTG3Q14201 252 aaPredicted RBP7.54□□□□□ -1.2
CNOT4-205ENST00000423368 FAAH2Q6GMR7 532 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 APBB1IPQ7Z5R6 666 aaPredicted RBP7.54□□□□□ -1.2
CNOT4-205ENST00000423368 MGARPQ8TDB4 240 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 ZSCAN31Q96LW9 406 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms