RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 RRP36Q96EU6 259 aaKnown RBP10.33□□□□□ -0.76
HPS4-204ENST00000422379 AS3MTQ9HBK9 375 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 KCNH4Q9UQ05 1017 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 SMCHD1A6NHR9 2005 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 ZNF536O15090 1300 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 A0A0G2JLL6 359 aaPredicted RBP10.32□□□□□ -0.76
HPS4-204ENST00000422379 PNMA6FA0A0J9YX94 578 aa10.32□□□□□ -0.76
HPS4-204ENST00000422379 M0R2N6 131 aa10.32□□□□□ -0.76
HPS4-204ENST00000422379 AKAP17AQ02040 695 aaKnown RBP10.32□□□□□ -0.76
HPS4-204ENST00000422379 MKRN3Q13064 507 aaKnown RBP10.32□□□□□ -0.76
HPS4-204ENST00000422379 IKQ13123 557 aaPredicted RBP10.32□□□□□ -0.76
HPS4-204ENST00000422379 PPIL2Q13356 520 aa10.32□□□□□ -0.76
HPS4-204ENST00000422379 PRRT2Q7Z6L0 340 aaPredicted RBP10.32□□□□□ -0.76
HPS4-204ENST00000422379 GAS2L3Q86XJ1 694 aa10.32□□□□□ -0.76
HPS4-204ENST00000422379 DIS3L2Q8IYB7 885 aaKnown RBP10.32□□□□□ -0.76
HPS4-204ENST00000422379 RASGRP4Q8TDF6 673 aa10.32□□□□□ -0.76
HPS4-204ENST00000422379 P2RX7Q99572 595 aaKnown RBP10.32□□□□□ -0.76
HPS4-204ENST00000422379 RANBP17Q9H2T7 1088 aaKnown RBP10.32□□□□□ -0.76
HPS4-204ENST00000422379 CNPY2Q9Y2B0 182 aa10.32□□□□□ -0.76
HPS4-204ENST00000422379 LOC285556D6RIA3 1793 aa10.31□□□□□ -0.76
HPS4-204ENST00000422379 PARP14Q460N5 1801 aa10.31□□□□□ -0.76
HPS4-204ENST00000422379 PLA2G6O60733 806 aa10.31□□□□□ -0.76
HPS4-204ENST00000422379 U2AF2P26368 475 aaKnown RBP eCLIP10.31□□□□□ -0.761e-6■■□□□ 13.6
HPS4-204ENST00000422379 TMEM87AQ8NBN3 555 aa10.31□□□□□ -0.76
HPS4-204ENST00000422379 WASF1Q92558 559 aa10.31□□□□□ -0.76
HPS4-204ENST00000422379 TANGO6Q9C0B7 1094 aa10.31□□□□□ -0.76
HPS4-204ENST00000422379 RBM27Q9P2N5 1060 aaKnown RBP10.31□□□□□ -0.76
HPS4-204ENST00000422379 FEM1BQ9UK73 627 aa10.31□□□□□ -0.76
HPS4-204ENST00000422379 KIF3AQ9Y496 699 aa10.31□□□□□ -0.76
HPS4-204ENST00000422379 ATP6V1DQ9Y5K8 247 aa10.31□□□□□ -0.76
HPS4-204ENST00000422379 CENPFP49454 3210 aa10.31□□□□□ -0.76
HPS4-204ENST00000422379 C19orf81C9J6K1 198 aa10.31□□□□□ -0.76
HPS4-204ENST00000422379 FLOT1O75955 427 aa10.31□□□□□ -0.76
HPS4-204ENST00000422379 MBD3O95983 291 aa10.31□□□□□ -0.76
HPS4-204ENST00000422379 PDIA4P13667 645 aaKnown RBP10.31□□□□□ -0.76
HPS4-204ENST00000422379 YY1P25490 414 aa10.31□□□□□ -0.76
HPS4-204ENST00000422379 TOB1P50616 345 aaPredicted RBP10.31□□□□□ -0.76
HPS4-204ENST00000422379 USP14P54578 494 aa10.31□□□□□ -0.76
HPS4-204ENST00000422379 GPAT2Q6NUI2 795 aa10.31□□□□□ -0.76
HPS4-204ENST00000422379 CCDC174Q6PII3 467 aa10.31□□□□□ -0.76
HPS4-204ENST00000422379 ZNF784Q8NCA9 323 aaPredicted RBP10.31□□□□□ -0.76
HPS4-204ENST00000422379 REPS2Q8NFH8 660 aa10.31□□□□□ -0.76
HPS4-204ENST00000422379 ATG4CQ96DT6 458 aa10.31□□□□□ -0.76
HPS4-204ENST00000422379 MS4A4AQ96JQ5 239 aa10.31□□□□□ -0.76
HPS4-204ENST00000422379 SLF1Q9BQI6 1058 aa10.31□□□□□ -0.76
HPS4-204ENST00000422379 PPP1R9AQ9ULJ8 1098 aa10.31□□□□□ -0.76
HPS4-204ENST00000422379 EDIL3O43854 480 aa10.3□□□□□ -0.76
HPS4-204ENST00000422379 GADD45BO75293 160 aaPredicted RBP10.3□□□□□ -0.76
HPS4-204ENST00000422379 XRCC6P12956 609 aaKnown RBP eCLIP10.3□□□□□ -0.766e-6■■■■■ 31.4
HPS4-204ENST00000422379 NAPAP54920 295 aa10.3□□□□□ -0.76
HPS4-204ENST00000422379 FKBP1BP68106 108 aa10.3□□□□□ -0.76
HPS4-204ENST00000422379 ZSCAN23Q3MJ62 389 aa10.3□□□□□ -0.76
HPS4-204ENST00000422379 USH1GQ495M9 461 aa10.3□□□□□ -0.76
HPS4-204ENST00000422379 CATSPERGQ6ZRH7 1159 aa10.3□□□□□ -0.76
HPS4-204ENST00000422379 SAPCD2Q86UD0 394 aa10.3□□□□□ -0.76
HPS4-204ENST00000422379 SLC10A4Q96EP9 437 aa10.3□□□□□ -0.76
HPS4-204ENST00000422379 AGBL1Q96MI9 1066 aa10.3□□□□□ -0.76
HPS4-204ENST00000422379 ZMYND12Q9H0C1 365 aa10.3□□□□□ -0.76
HPS4-204ENST00000422379 R3HDMLQ9H3Y0 253 aa10.3□□□□□ -0.76
HPS4-204ENST00000422379 TMEM260Q9NX78 707 aa10.3□□□□□ -0.76
HPS4-204ENST00000422379 TMEM63CQ9P1W3 806 aa10.3□□□□□ -0.76
HPS4-204ENST00000422379 TFIP11Q9UBB9 837 aaKnown RBP10.3□□□□□ -0.76
HPS4-204ENST00000422379 SEC63Q9UGP8 760 aaKnown RBP10.3□□□□□ -0.76
HPS4-204ENST00000422379 CXCL11O14625 94 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 FIBPO43427 364 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 HUNKP57058 714 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 NLRP5P59047 1200 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 ZNF445P59923 1031 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 TRIM29Q14134 588 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 UBE2SQ16763 222 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 FAM160B2Q86V87 743 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 NOSTRINQ8IVI9 506 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 C2orf69Q8N8R5 385 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 PRPF38AQ8NAV1 312 aaKnown RBP10.29□□□□□ -0.76
HPS4-204ENST00000422379 RGS22Q8NE09 1264 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 RBM46Q8TBY0 533 aaKnown RBP10.29□□□□□ -0.76
HPS4-204ENST00000422379 CHURC1Q8WUH1 139 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 TBC1D5Q92609 795 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 USP28Q96RU2 1077 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 GRPEL1Q9HAV7 217 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 SLC38A10Q9HBR0 1119 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 SH3GLB2Q9NR46 395 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 PCDHA4Q9UN74 947 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 ADAMTS5Q9UNA0 930 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 TRPM7Q96QT4 1865 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 MYH15Q9Y2K3 1946 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 SMCO2A6NFE2 343 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 SPDYE16A6NNV3 312 aaPredicted RBP10.29□□□□□ -0.76
HPS4-204ENST00000422379 VWA5AO00534 786 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 MRE11P49959 708 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 MYSM1Q5VVJ2 828 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 SPRYD7Q5W111 196 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 GADL1Q6ZQY3 521 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 FBXO11Q86XK2 927 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 DAGLBQ8NCG7 672 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 BRI3BPQ8WY22 251 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 PGBD1Q96JS3 809 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 PTPN18Q99952 460 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 FOXP1Q9H334 677 aaPredicted RBP10.29□□□□□ -0.76
HPS4-204ENST00000422379 RAVER2Q9HCJ3 691 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms