RNA–Protein interactions for RNA: ENST00000421710.5

SNAPC3-203, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 5

Gene SNAPC3, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-203ENST00000421710 ACAD9Q9H845 621 aa29.39■■■□□ 2.3
SNAPC3-203ENST00000421710 GPCPD1Q9NPB8 672 aa29.39■■■□□ 2.3
SNAPC3-203ENST00000421710 NRBP1Q9UHY1 535 aa29.39■■■□□ 2.3
SNAPC3-203ENST00000421710 PNMA2Q9UL42 364 aa29.39■■■□□ 2.3
SNAPC3-203ENST00000421710 FRMPD2Q68DX3 1309 aaPredicted RBP29.39■■■□□ 2.3
SNAPC3-203ENST00000421710 CYBAP13498 195 aa29.38■■■□□ 2.29
SNAPC3-203ENST00000421710 RANBP17Q9H2T7 1088 aaKnown RBP29.38■■■□□ 2.29
SNAPC3-203ENST00000421710 ZNF536O15090 1300 aa29.38■■■□□ 2.29
SNAPC3-203ENST00000421710 CNGA1P29973 690 aa29.37■■■□□ 2.29
SNAPC3-203ENST00000421710 TTBK2Q6IQ55 1244 aa29.37■■■□□ 2.29
SNAPC3-203ENST00000421710 CCDC174Q6PII3 467 aa29.37■■■□□ 2.29
SNAPC3-203ENST00000421710 NECAB2Q7Z6G3 386 aa29.37■■■□□ 2.29
SNAPC3-203ENST00000421710 SKAP1Q86WV1 359 aa29.37■■■□□ 2.29
SNAPC3-203ENST00000421710 MSL3Q8N5Y2 521 aaKnown RBP29.37■■■□□ 2.29
SNAPC3-203ENST00000421710 NCOA7Q8NI08 942 aa29.37■■■□□ 2.29
SNAPC3-203ENST00000421710 HOMER2Q9NSB8 354 aa29.37■■■□□ 2.29
SNAPC3-203ENST00000421710 DDX20Q9UHI6 824 aaKnown RBP29.37■■■□□ 2.29
SNAPC3-203ENST00000421710 RBM8AQ9Y5S9 174 aaKnown RBP29.37■■■□□ 2.29
SNAPC3-203ENST00000421710 ICAM1P05362 532 aa29.36■■■□□ 2.29
SNAPC3-203ENST00000421710 SLC16A2P36021 539 aa29.36■■■□□ 2.29
SNAPC3-203ENST00000421710 IFIT1BQ5T764 474 aaKnown RBP29.36■■■□□ 2.29
SNAPC3-203ENST00000421710 AGBL1Q96MI9 1066 aa29.36■■■□□ 2.29
SNAPC3-203ENST00000421710 TINF2Q9BSI4 451 aa29.36■■■□□ 2.29
SNAPC3-203ENST00000421710 RNF146Q9NTX7 359 aa29.36■■■□□ 2.29
SNAPC3-203ENST00000421710 DNAJC25-GNG10A0A024R161 153 aa29.35■■■□□ 2.29
SNAPC3-203ENST00000421710 E7EWF7 191 aa29.35■■■□□ 2.29
SNAPC3-203ENST00000421710 LHX8Q68G74 356 aa29.35■■■□□ 2.29
SNAPC3-203ENST00000421710 CCPG1Q9ULG6 757 aa29.35■■■□□ 2.29
SNAPC3-203ENST00000421710 FRMPD3Q5JV73 1810 aa29.34■■■□□ 2.29
SNAPC3-203ENST00000421710 ERICH2A1L162 156 aa29.34■■■□□ 2.29
SNAPC3-203ENST00000421710 ALAS1P13196 640 aa29.34■■■□□ 2.29
SNAPC3-203ENST00000421710 SART3Q15020 963 aaKnown RBP29.34■■■□□ 2.29
SNAPC3-203ENST00000421710 ASPRV1Q53RT3 343 aa29.34■■■□□ 2.29
SNAPC3-203ENST00000421710 ERICH6BQ5W0A0 696 aa29.34■■■□□ 2.29
SNAPC3-203ENST00000421710 ZNF467Q7Z7K2 595 aaPredicted RBP29.34■■■□□ 2.29
SNAPC3-203ENST00000421710 PAWRQ96IZ0 340 aaKnown RBP29.34■■■□□ 2.29
SNAPC3-203ENST00000421710 TRERF1Q96PN7 1200 aa29.34■■■□□ 2.29
SNAPC3-203ENST00000421710 LSG1Q9H089 658 aaKnown RBP29.34■■■□□ 2.29
SNAPC3-203ENST00000421710 ANO2Q9NQ90 1003 aa29.34■■■□□ 2.29
SNAPC3-203ENST00000421710 PFASO15067 1338 aa29.34■■■□□ 2.29
SNAPC3-203ENST00000421710 SEPT4O43236 478 aa29.33■■■□□ 2.29
SNAPC3-203ENST00000421710 CDC45O75419 566 aa29.33■■■□□ 2.29
SNAPC3-203ENST00000421710 TRPV1Q8NER1 839 aa29.33■■■□□ 2.29
SNAPC3-203ENST00000421710 CNPY2Q9Y2B0 182 aa29.33■■■□□ 2.29
SNAPC3-203ENST00000421710 SYNGAP1Q96PV0 1343 aa29.33■■■□□ 2.29
SNAPC3-203ENST00000421710 SNAP25P60880 206 aa29.32■■■□□ 2.28
SNAPC3-203ENST00000421710 CYB5R4Q7L1T6 521 aa29.32■■■□□ 2.28
SNAPC3-203ENST00000421710 PARP1P09874 1014 aaKnown RBP29.31■■■□□ 2.28
SNAPC3-203ENST00000421710 SEC23AQ15436 765 aa29.31■■■□□ 2.28
SNAPC3-203ENST00000421710 MAMDC4Q6UXC1 1216 aa29.31■■■□□ 2.28
SNAPC3-203ENST00000421710 DPF3Q92784 378 aa29.31■■■□□ 2.28
SNAPC3-203ENST00000421710 POTEB2H3BUK9 544 aa29.3■■■□□ 2.28
SNAPC3-203ENST00000421710 GOLGA8HP0CJ92 632 aa29.3■■■□□ 2.28
SNAPC3-203ENST00000421710 DIS3LQ8TF46 1054 aaKnown RBP29.3■■■□□ 2.28
SNAPC3-203ENST00000421710 C11orf49Q9H6J7 331 aa29.3■■■□□ 2.28
SNAPC3-203ENST00000421710 A1CFQ9NQ94 594 aaKnown RBP29.3■■■□□ 2.28
SNAPC3-203ENST00000421710 WDR19Q8NEZ3 1342 aa29.29■■■□□ 2.28
SNAPC3-203ENST00000421710 IFIT3O14879 490 aaKnown RBP29.29■■■□□ 2.28
SNAPC3-203ENST00000421710 STOX1Q6ZVD7 989 aa29.28■■■□□ 2.28
SNAPC3-203ENST00000421710 TAF6LQ9Y6J9 622 aa29.28■■■□□ 2.28
SNAPC3-203ENST00000421710 MNX1P50219 401 aaPredicted RBP29.27■■■□□ 2.28
SNAPC3-203ENST00000421710 WTAPQ15007 396 aa29.27■■■□□ 2.28
SNAPC3-203ENST00000421710 PRAMEF19Q5SWL8 479 aa29.27■■■□□ 2.28
SNAPC3-203ENST00000421710 RNF20Q5VTR2 975 aa29.27■■■□□ 2.28
SNAPC3-203ENST00000421710 FAM133AQ8N9E0 248 aa29.27■■■□□ 2.28
SNAPC3-203ENST00000421710 SLC27A2O14975 620 aa29.26■■■□□ 2.27
SNAPC3-203ENST00000421710 MUM1L1Q5H9M0 696 aa29.26■■■□□ 2.27
SNAPC3-203ENST00000421710 MB21D2Q8IYB1 491 aaPredicted RBP29.26■■■□□ 2.27
SNAPC3-203ENST00000421710 ARRDC4Q8NCT1 418 aa29.26■■■□□ 2.27
SNAPC3-203ENST00000421710 MTA3Q9BTC8 594 aa29.26■■■□□ 2.27
SNAPC3-203ENST00000421710 UBA5Q9GZZ9 404 aa29.26■■■□□ 2.27
SNAPC3-203ENST00000421710 PPP4R2Q9NY27 417 aa29.26■■■□□ 2.27
SNAPC3-203ENST00000421710 NR2E3Q9Y5X4 410 aa29.26■■■□□ 2.27
SNAPC3-203ENST00000421710 AKR1A1P14550 325 aa29.25■■■□□ 2.27
SNAPC3-203ENST00000421710 NECTIN1Q15223 517 aa29.25■■■□□ 2.27
SNAPC3-203ENST00000421710 CREB3L3Q68CJ9 461 aa29.25■■■□□ 2.27
SNAPC3-203ENST00000421710 NSMFQ6X4W1 530 aa29.25■■■□□ 2.27
SNAPC3-203ENST00000421710 CYP39A1Q9NYL5 469 aa29.25■■■□□ 2.27
SNAPC3-203ENST00000421710 ASB14A6NK59 587 aa29.24■■■□□ 2.27
SNAPC3-203ENST00000421710 DNM1LO00429 736 aa29.24■■■□□ 2.27
SNAPC3-203ENST00000421710 DHX16O60231 1041 aaKnown RBP29.24■■■□□ 2.27
SNAPC3-203ENST00000421710 RARBP10826 455 aa29.24■■■□□ 2.27
SNAPC3-203ENST00000421710 TMEM67Q5HYA8 995 aa29.24■■■□□ 2.27
SNAPC3-203ENST00000421710 ABHD16BQ9H3Z7 469 aa29.24■■■□□ 2.27
SNAPC3-203ENST00000421710 EVI5O60447 810 aa29.23■■■□□ 2.27
SNAPC3-203ENST00000421710 SNAI1O95863 264 aaPredicted RBP29.23■■■□□ 2.27
SNAPC3-203ENST00000421710 ZNF865P0CJ78 1059 aaPredicted RBP29.23■■■□□ 2.27
SNAPC3-203ENST00000421710 MCM5P33992 734 aa29.23■■■□□ 2.27
SNAPC3-203ENST00000421710 CNTN2Q02246 1040 aa29.23■■■□□ 2.27
SNAPC3-203ENST00000421710 CDC37Q16543 378 aaPredicted RBP29.23■■■□□ 2.27
SNAPC3-203ENST00000421710 ARMCX2Q7L311 632 aa29.23■■■□□ 2.27
SNAPC3-203ENST00000421710 ADGRF4Q8IZF3 695 aa29.23■■■□□ 2.27
SNAPC3-203ENST00000421710 FGD4Q96M96 766 aa29.23■■■□□ 2.27
SNAPC3-203ENST00000421710 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.23■■■□□ 2.27
SNAPC3-203ENST00000421710 ZHX1Q9UKY1 873 aaPredicted RBP29.23■■■□□ 2.27
SNAPC3-203ENST00000421710 COL6A1P12109 1028 aa29.22■■■□□ 2.27
SNAPC3-203ENST00000421710 CHST3Q7LGC8 479 aa29.22■■■□□ 2.27
SNAPC3-203ENST00000421710 CATIPQ7Z7H3 387 aa29.22■■■□□ 2.27
SNAPC3-203ENST00000421710 MAF1Q9H063 256 aa29.22■■■□□ 2.27
SNAPC3-203ENST00000421710 CPVLQ9H3G5 476 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms