RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 RRP36Q96EU6 259 aaKnown RBP18.2■□□□□ 0.5
DDX55-203ENST00000421670 DDX11Q96FC9 970 aa18.2■□□□□ 0.5
DDX55-203ENST00000421670 V9GY48 417 aaPredicted RBP18.2■□□□□ 0.5
DDX55-203ENST00000421670 MGAMO43451 1857 aa18.19■□□□□ 0.5
DDX55-203ENST00000421670 ZBTB5O15062 677 aa18.19■□□□□ 0.5
DDX55-203ENST00000421670 PPP1R11O60927 126 aaPredicted RBP18.19■□□□□ 0.5
DDX55-203ENST00000421670 ZBED4O75132 1171 aa18.19■□□□□ 0.5
DDX55-203ENST00000421670 SSRP1Q08945 709 aaKnown RBP18.19■□□□□ 0.5
DDX55-203ENST00000421670 BECN1Q14457 450 aa18.19■□□□□ 0.5
DDX55-203ENST00000421670 TMEM132BQ14DG7 1078 aa18.19■□□□□ 0.5
DDX55-203ENST00000421670 TRIM22Q8IYM9 498 aa18.19■□□□□ 0.5
DDX55-203ENST00000421670 CPXCR1Q8N123 301 aa18.19■□□□□ 0.5
DDX55-203ENST00000421670 RNF26Q9BY78 433 aaPredicted RBP18.19■□□□□ 0.5
DDX55-203ENST00000421670 RAVER2Q9HCJ3 691 aaKnown RBP18.19■□□□□ 0.5
DDX55-203ENST00000421670 TXNRD2Q9NNW7 524 aa18.19■□□□□ 0.5
DDX55-203ENST00000421670 BTBD7Q9P203 1132 aa18.19■□□□□ 0.5
DDX55-203ENST00000421670 SEC63Q9UGP8 760 aaKnown RBP18.19■□□□□ 0.5
DDX55-203ENST00000421670 CTDP1Q9Y5B0 961 aaPredicted RBP18.19■□□□□ 0.5
DDX55-203ENST00000421670 ZNF536O15090 1300 aa18.19■□□□□ 0.5
DDX55-203ENST00000421670 ADGRA2Q96PE1 1338 aa18.19■□□□□ 0.5
DDX55-203ENST00000421670 PLXNB2O15031 1838 aa18.19■□□□□ 0.5
DDX55-203ENST00000421670 CNMDO75829 334 aa18.18■□□□□ 0.5
DDX55-203ENST00000421670 ANKRD13CQ8N6S4 541 aa18.18■□□□□ 0.5
DDX55-203ENST00000421670 DNAJC5GQ8N7S2 189 aa18.18■□□□□ 0.5
DDX55-203ENST00000421670 SMARCC2Q8TAQ2 1214 aa18.18■□□□□ 0.5
DDX55-203ENST00000421670 GPKOWQ92917 476 aaPredicted RBP eCLIP18.18■□□□□ 0.5
DDX55-203ENST00000421670 RBPJLQ9UBG7 517 aa18.18■□□□□ 0.5
DDX55-203ENST00000421670 ZNF214Q9UL59 606 aaPredicted RBP18.18■□□□□ 0.5
DDX55-203ENST00000421670 STK36Q9NRP7 1315 aa18.18■□□□□ 0.5
DDX55-203ENST00000421670 PNMA6FA0A0J9YX94 578 aa18.17■□□□□ 0.5
DDX55-203ENST00000421670 PRPF3O43395 683 aaKnown RBP18.17■□□□□ 0.5
DDX55-203ENST00000421670 ALDH1A1P00352 501 aa18.17■□□□□ 0.5
DDX55-203ENST00000421670 FDPSP14324 419 aaKnown RBP18.17■□□□□ 0.5
DDX55-203ENST00000421670 SLC4A3P48751 1232 aa18.17■□□□□ 0.5
DDX55-203ENST00000421670 AKAP17AQ02040 695 aaKnown RBP18.17■□□□□ 0.5
DDX55-203ENST00000421670 PLS1Q14651 629 aa18.17■□□□□ 0.5
DDX55-203ENST00000421670 PKN1Q16512 942 aa18.17■□□□□ 0.5
DDX55-203ENST00000421670 USH1GQ495M9 461 aa18.17■□□□□ 0.5
DDX55-203ENST00000421670 MB21D1Q8N884 522 aa18.17■□□□□ 0.5
DDX55-203ENST00000421670 SPRYD3Q8NCJ5 442 aa18.17■□□□□ 0.5
DDX55-203ENST00000421670 AGBL1Q96MI9 1066 aa18.17■□□□□ 0.5
DDX55-203ENST00000421670 LLPHQ9BRT6 129 aaKnown RBP18.17■□□□□ 0.5
DDX55-203ENST00000421670 ORC3Q9UBD5 711 aaPredicted RBP18.17■□□□□ 0.5
DDX55-203ENST00000421670 CPA4Q9UI42 421 aa18.17■□□□□ 0.5
DDX55-203ENST00000421670 CA12O43570 354 aa18.17■□□□□ 0.5
DDX55-203ENST00000421670 ICAM1P05362 532 aa18.17■□□□□ 0.5
DDX55-203ENST00000421670 FDX1P10109 184 aa18.17■□□□□ 0.5
DDX55-203ENST00000421670 SNRNP48Q6IEG0 339 aaKnown RBP18.17■□□□□ 0.5
DDX55-203ENST00000421670 HEATR3Q7Z4Q2 680 aa18.17■□□□□ 0.5
DDX55-203ENST00000421670 AIFM3Q96NN9 605 aa18.17■□□□□ 0.5
DDX55-203ENST00000421670 R3HDMLQ9H3Y0 253 aa18.17■□□□□ 0.5
DDX55-203ENST00000421670 ZFYVE28Q9HCC9 887 aa18.17■□□□□ 0.5
DDX55-203ENST00000421670 CCPG1Q9ULG6 757 aa18.17■□□□□ 0.5
DDX55-203ENST00000421670 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.17■□□□□ 0.5
DDX55-203ENST00000421670 TLR2O60603 784 aa18.16■□□□□ 0.5
DDX55-203ENST00000421670 TRPA1O75762 1119 aa18.16■□□□□ 0.5
DDX55-203ENST00000421670 DEXIO95424 95 aa18.16■□□□□ 0.5
DDX55-203ENST00000421670 HSP90AA1P07900 732 aaKnown RBP18.16■□□□□ 0.5
DDX55-203ENST00000421670 SCG2P13521 617 aa18.16■□□□□ 0.5
DDX55-203ENST00000421670 GCLCP48506 637 aaPredicted RBP18.16■□□□□ 0.5
DDX55-203ENST00000421670 PFKFB3Q16875 520 aaPredicted RBP18.16■□□□□ 0.5
DDX55-203ENST00000421670 WWC2Q6AWC2 1192 aa18.16■□□□□ 0.5
DDX55-203ENST00000421670 FBXO11Q86XK2 927 aa18.16■□□□□ 0.5
DDX55-203ENST00000421670 GTF3C2Q8WUA4 911 aaPredicted RBP18.16■□□□□ 0.5
DDX55-203ENST00000421670 COA7Q96BR5 231 aa18.16■□□□□ 0.5
DDX55-203ENST00000421670 RNF186Q9NXI6 227 aa18.16■□□□□ 0.5
DDX55-203ENST00000421670 RABGAP1Q9Y3P9 1069 aa18.16■□□□□ 0.5
DDX55-203ENST00000421670 ZNFX1Q9P2E3 1918 aaKnown RBP18.15■□□□□ 0.5
DDX55-203ENST00000421670 TBC1D8O95759 1140 aa18.15■□□□□ 0.5
DDX55-203ENST00000421670 GJB2P29033 226 aa18.15■□□□□ 0.5
DDX55-203ENST00000421670 ERVK-9P63128 1117 aa18.15■□□□□ 0.5
DDX55-203ENST00000421670 ERVK-24P63145 666 aa18.15■□□□□ 0.5
DDX55-203ENST00000421670 AMNQ9BXJ7 453 aa18.15■□□□□ 0.5
DDX55-203ENST00000421670 TEX13BQ9BXU2 312 aa18.15■□□□□ 0.5
DDX55-203ENST00000421670 SPATC1LQ9H0A9 340 aa18.15■□□□□ 0.5
DDX55-203ENST00000421670 HOMER2Q9NSB8 354 aa18.15■□□□□ 0.5
DDX55-203ENST00000421670 RBM27Q9P2N5 1060 aaKnown RBP18.15■□□□□ 0.5
DDX55-203ENST00000421670 SMC3Q9UQE7 1217 aa18.15■□□□□ 0.5
DDX55-203ENST00000421670 LCTP09848 1927 aa18.14■□□□□ 0.5
DDX55-203ENST00000421670 ATP2A1O14983 1001 aa18.14■□□□□ 0.49
DDX55-203ENST00000421670 STAT3P40763 770 aa18.14■□□□□ 0.49
DDX55-203ENST00000421670 FOSBP53539 338 aa18.14■□□□□ 0.49
DDX55-203ENST00000421670 OAZ1P54368 228 aa18.14■□□□□ 0.49
DDX55-203ENST00000421670 HMGN5P82970 282 aaKnown RBP18.14■□□□□ 0.49
DDX55-203ENST00000421670 Q3C1V9 767 aa18.14■□□□□ 0.49
DDX55-203ENST00000421670 INTS4Q96HW7 963 aaKnown RBP18.14■□□□□ 0.49
DDX55-203ENST00000421670 RIPK3Q9Y572 518 aa18.14■□□□□ 0.49
DDX55-203ENST00000421670 PCDHA1Q9Y5I3 950 aa18.14■□□□□ 0.49
DDX55-203ENST00000421670 DOCK3Q8IZD9 2030 aa18.14■□□□□ 0.49
DDX55-203ENST00000421670 BCRP11274 1271 aa18.13■□□□□ 0.49
DDX55-203ENST00000421670 ALAS1P13196 640 aa18.13■□□□□ 0.49
DDX55-203ENST00000421670 FAM110CQ1W6H9 321 aa18.13■□□□□ 0.49
DDX55-203ENST00000421670 TYW1BQ6NUM6 668 aa18.13■□□□□ 0.49
DDX55-203ENST00000421670 C17orf99Q6UX52 265 aa18.13■□□□□ 0.49
DDX55-203ENST00000421670 GPRC5AQ8NFJ5 357 aa18.13■□□□□ 0.49
DDX55-203ENST00000421670 SHISA4Q96DD7 197 aa18.13■□□□□ 0.49
DDX55-203ENST00000421670 MOV10L1Q9BXT6 1211 aaKnown RBP18.13■□□□□ 0.49
DDX55-203ENST00000421670 GJB4Q9NTQ9 266 aa18.13■□□□□ 0.49
DDX55-203ENST00000421670 VPS54Q9P1Q0 977 aa18.13■□□□□ 0.49
DDX55-203ENST00000421670 MORF4L1Q9UBU8 362 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms