RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 GUCY2CP25092 1073 aa16.7■□□□□ 0.26
SEMA4D-204ENST00000420101 GABPAQ06546 454 aa16.7■□□□□ 0.26
SEMA4D-204ENST00000420101 TNIP1Q15025 636 aa16.7■□□□□ 0.26
SEMA4D-204ENST00000420101 TMTC3Q6ZXV5 915 aa16.7■□□□□ 0.26
SEMA4D-204ENST00000420101 HDXQ7Z353 690 aa16.7■□□□□ 0.26
SEMA4D-204ENST00000420101 C10orf67Q8IYJ2 551 aa16.7■□□□□ 0.26
SEMA4D-204ENST00000420101 AGBL3Q8NEM8 1001 aa16.7■□□□□ 0.26
SEMA4D-204ENST00000420101 CEP95Q96GE4 821 aa16.7■□□□□ 0.26
SEMA4D-204ENST00000420101 PI4KBQ9UBF8 816 aa16.7■□□□□ 0.26
SEMA4D-204ENST00000420101 V9GY48 417 aaPredicted RBP16.7■□□□□ 0.26
SEMA4D-204ENST00000420101 CDK5RAP2Q96SN8 1893 aa16.7■□□□□ 0.26
SEMA4D-204ENST00000420101 AKR1B1P15121 316 aa16.7■□□□□ 0.26
SEMA4D-204ENST00000420101 ME1P48163 572 aa16.7■□□□□ 0.26
SEMA4D-204ENST00000420101 FANCCQ00597 558 aa16.7■□□□□ 0.26
SEMA4D-204ENST00000420101 RASSF7Q02833 373 aa16.7■□□□□ 0.26
SEMA4D-204ENST00000420101 PPP2R3AQ06190 1150 aa16.7■□□□□ 0.26
SEMA4D-204ENST00000420101 TTC31Q49AM3 519 aaPredicted RBP16.7■□□□□ 0.26
SEMA4D-204ENST00000420101 BRAPQ7Z569 592 aa16.7■□□□□ 0.26
SEMA4D-204ENST00000420101 ANKS1AQ92625 1134 aa16.7■□□□□ 0.26
SEMA4D-204ENST00000420101 DDTLA6NHG4 134 aaPredicted RBP16.69■□□□□ 0.26
SEMA4D-204ENST00000420101 SPDYE2BA6NHP3 402 aa16.69■□□□□ 0.26
SEMA4D-204ENST00000420101 STX10O60499 249 aa16.69■□□□□ 0.26
SEMA4D-204ENST00000420101 SPDYE6P0CI01 402 aa16.69■□□□□ 0.26
SEMA4D-204ENST00000420101 EIF6P56537 245 aaKnown RBP16.69■□□□□ 0.26
SEMA4D-204ENST00000420101 ATP2B2Q01814 1243 aa16.69■□□□□ 0.26
SEMA4D-204ENST00000420101 KIF23Q02241 960 aaPredicted RBP16.69■□□□□ 0.26
SEMA4D-204ENST00000420101 LRRN4CLQ8ND94 238 aa16.69■□□□□ 0.26
SEMA4D-204ENST00000420101 VEZTQ9HBM0 779 aa16.69■□□□□ 0.26
SEMA4D-204ENST00000420101 COL4A5P29400 1685 aa16.69■□□□□ 0.26
SEMA4D-204ENST00000420101 DDX60LQ5H9U9 1706 aaKnown RBP16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 FAM196BA6NMK8 535 aa16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 PRPF3O43395 683 aaKnown RBP16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 TOP1P11387 765 aaKnown RBP16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 GNAQP50148 359 aa16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 LONRF2Q1L5Z9 754 aa16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 SRBD1Q8N5C6 995 aaKnown RBP16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 CEP112Q8N8E3 955 aa16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 TRERF1Q96PN7 1200 aa16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 USP28Q96RU2 1077 aa16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 GMLQ99445 158 aa16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 EHD4Q9H223 541 aa16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 KCNJ14Q9UNX9 436 aa16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 ENTPD3O75355 529 aa16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 CPP00450 1065 aa16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 SHMT1P34896 483 aa16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 LMAN1P49257 510 aa16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 NCAPHQ15003 741 aa16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 VSTM4Q8IW00 320 aa16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 SUGP1Q8IWZ8 645 aaKnown RBP16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 MYCBPQ99417 103 aaPredicted RBP16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 PARD6BQ9BYG5 372 aa16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 POLR3EQ9NVU0 708 aa16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 ZNF70Q9UC06 446 aaPredicted RBP16.68■□□□□ 0.26
SEMA4D-204ENST00000420101 KIF28PB7ZC32 967 aa16.67■□□□□ 0.26
SEMA4D-204ENST00000420101 SEC31AO94979 1220 aaKnown RBP16.67■□□□□ 0.26
SEMA4D-204ENST00000420101 MMP14P50281 582 aa16.67■□□□□ 0.26
SEMA4D-204ENST00000420101 GRM4Q14833 912 aa16.67■□□□□ 0.26
SEMA4D-204ENST00000420101 CERKLQ49MI3 558 aaPredicted RBP16.67■□□□□ 0.26
SEMA4D-204ENST00000420101 NCAPGQ9BPX3 1015 aa16.67■□□□□ 0.26
SEMA4D-204ENST00000420101 FTOQ9C0B1 505 aaKnown RBP eCLIP16.67■□□□□ 0.26
SEMA4D-204ENST00000420101 RAB21Q9UL25 225 aa16.67■□□□□ 0.26
SEMA4D-204ENST00000420101 PPP2R2CQ9Y2T4 447 aa16.67■□□□□ 0.26
SEMA4D-204ENST00000420101 GJA3Q9Y6H8 435 aa16.67■□□□□ 0.26
SEMA4D-204ENST00000420101 FOCADQ5VW36 1801 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 NPM3O75607 178 aaKnown RBP16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 MMP1P03956 469 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 PARP1P09874 1014 aaKnown RBP16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 SLURP2P0DP57 97 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 SF3A1Q15459 793 aaKnown RBP16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 RBM26Q5T8P6 1007 aaKnown RBP16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 SH3BP5LQ7L8J4 393 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 FOXP4Q8IVH2 680 aaPredicted RBP16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 STAG2Q8N3U4 1231 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 CCDC17Q96LX7 622 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 CSRNP1Q96S65 589 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 MAP3K14Q99558 947 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 DEF6Q9H4E7 631 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 MED4Q9NPJ6 270 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 MTMR4Q9NYA4 1195 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 VPS54Q9P1Q0 977 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 JRKLQ9Y4A0 524 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 CNTNAP5Q8WYK1 1306 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 VWA3AA6NCI4 1184 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 RAD21O60216 631 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 GOLGA8HP0CJ92 632 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 UBASH3AP57075 661 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 STK38Q15208 465 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 DPCR1Q3MIW9 517 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 SWT1Q5T5J6 900 aaKnown RBP16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 MYSM1Q5VVJ2 828 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 DIS3L2Q8IYB7 885 aaKnown RBP16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 ELOA2Q8IYF1 753 aaPredicted RBP16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 LRRC47Q8N1G4 583 aaKnown RBP16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 MSANTD4Q8NCY6 345 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 FAM71BQ8TC56 605 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 ERCC4Q92889 916 aaPredicted RBP16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 MAD2L2Q9UI95 211 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 PCDHA7Q9UN72 937 aa16.66■□□□□ 0.26
SEMA4D-204ENST00000420101 TTLL1O95922 423 aa16.65■□□□□ 0.26
SEMA4D-204ENST00000420101 MYL5Q02045 173 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms