RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 UBAP2LQ14157 1087 aaKnown RBP8.52□□□□□ -1.05
HMGN1-205ENST00000419378 MVPQ14764 893 aaKnown RBP8.52□□□□□ -1.05
HMGN1-205ENST00000419378 CEP85Q6P2H3 762 aa8.52□□□□□ -1.05
HMGN1-205ENST00000419378 FIGNL1Q6PIW4 674 aa8.52□□□□□ -1.05
HMGN1-205ENST00000419378 TRIM22Q8IYM9 498 aa8.52□□□□□ -1.05
HMGN1-205ENST00000419378 C2orf69Q8N8R5 385 aa8.52□□□□□ -1.05
HMGN1-205ENST00000419378 WDR66Q8TBY9 1149 aa8.52□□□□□ -1.05
HMGN1-205ENST00000419378 GIPC2Q8TF65 315 aa8.52□□□□□ -1.05
HMGN1-205ENST00000419378 PRMT6Q96LA8 375 aaPredicted RBP8.52□□□□□ -1.05
HMGN1-205ENST00000419378 NIF3L1Q9GZT8 377 aa8.52□□□□□ -1.05
HMGN1-205ENST00000419378 GNL3LQ9NVN8 582 aaKnown RBP8.52□□□□□ -1.05
HMGN1-205ENST00000419378 AKAP2Q9Y2D5 859 aa8.52□□□□□ -1.05
HMGN1-205ENST00000419378 KCNMB2Q9Y691 235 aa8.52□□□□□ -1.05
HMGN1-205ENST00000419378 AOC2O75106 756 aa8.51□□□□□ -1.05
HMGN1-205ENST00000419378 SURF6O75683 361 aaKnown RBP8.51□□□□□ -1.05
HMGN1-205ENST00000419378 RPLP1P05386 114 aaKnown RBP8.51□□□□□ -1.05
HMGN1-205ENST00000419378 P4HBP07237 508 aaKnown RBP8.51□□□□□ -1.05
HMGN1-205ENST00000419378 EPB42P16452 691 aa8.51□□□□□ -1.05
HMGN1-205ENST00000419378 FKBP1BP68106 108 aa8.51□□□□□ -1.05
HMGN1-205ENST00000419378 EHHADHQ08426 723 aa8.51□□□□□ -1.05
HMGN1-205ENST00000419378 OS9Q13438 667 aaPredicted RBP8.51□□□□□ -1.05
HMGN1-205ENST00000419378 DSC3Q14574 896 aa8.51□□□□□ -1.05
HMGN1-205ENST00000419378 TRIP4Q15650 581 aaPredicted RBP8.51□□□□□ -1.05
HMGN1-205ENST00000419378 PRAMEF18Q5VWM3 479 aa8.51□□□□□ -1.05
HMGN1-205ENST00000419378 TEKT1Q969V4 418 aa8.51□□□□□ -1.05
HMGN1-205ENST00000419378 DEFB129Q9H1M3 183 aa8.51□□□□□ -1.05
HMGN1-205ENST00000419378 VEZTQ9HBM0 779 aa8.51□□□□□ -1.05
HMGN1-205ENST00000419378 DENND2AQ9ULE3 1009 aa8.51□□□□□ -1.05
HMGN1-205ENST00000419378 DDX19BQ9UMR2 479 aa8.51□□□□□ -1.05
HMGN1-205ENST00000419378 SUGT1Q9Y2Z0 365 aa8.51□□□□□ -1.05
HMGN1-205ENST00000419378 PCDHGC4Q9Y5F7 938 aa8.51□□□□□ -1.05
HMGN1-205ENST00000419378 SSC5DA1L4H1 1573 aa8.51□□□□□ -1.05
HMGN1-205ENST00000419378 MAST3O60307 1309 aa8.51□□□□□ -1.05
HMGN1-205ENST00000419378 PDS5AQ29RF7 1337 aaKnown RBP8.51□□□□□ -1.05
HMGN1-205ENST00000419378 SALL1Q9NSC2 1324 aa8.51□□□□□ -1.05
HMGN1-205ENST00000419378 DCDC2BA2VCK2 349 aa8.5□□□□□ -1.05
HMGN1-205ENST00000419378 KHNYNO15037 678 aaKnown RBP8.5□□□□□ -1.05
HMGN1-205ENST00000419378 FAM157BP0CG42 384 aa8.5□□□□□ -1.05
HMGN1-205ENST00000419378 ZNF16P17020 682 aaPredicted RBP8.5□□□□□ -1.05
HMGN1-205ENST00000419378 PRDX5P30044 214 aa8.5□□□□□ -1.05
HMGN1-205ENST00000419378 HDLBPQ00341 1268 aaKnown RBP8.5□□□□□ -1.05
HMGN1-205ENST00000419378 TAGLNQ01995 201 aaKnown RBP8.5□□□□□ -1.05
HMGN1-205ENST00000419378 SFSWAPQ12872 951 aaKnown RBP8.5□□□□□ -1.05
HMGN1-205ENST00000419378 RASGRF1Q13972 1273 aa8.5□□□□□ -1.05
HMGN1-205ENST00000419378 COL19A1Q14993 1142 aa8.5□□□□□ -1.05
HMGN1-205ENST00000419378 C20orf194Q5TEA3 1177 aa8.5□□□□□ -1.05
HMGN1-205ENST00000419378 RGMBQ6NW40 437 aa8.5□□□□□ -1.05
HMGN1-205ENST00000419378 MOB2Q70IA6 237 aa8.5□□□□□ -1.05
HMGN1-205ENST00000419378 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.5□□□□□ -1.05
HMGN1-205ENST00000419378 ALKBH8Q96BT7 664 aaKnown RBP8.5□□□□□ -1.05
HMGN1-205ENST00000419378 ZNF837Q96EG3 531 aaPredicted RBP8.5□□□□□ -1.05
HMGN1-205ENST00000419378 YTHDC1Q96MU7 727 aaKnown RBP8.5□□□□□ -1.05
HMGN1-205ENST00000419378 NEUROD6Q96NK8 337 aa8.5□□□□□ -1.05
HMGN1-205ENST00000419378 TDRD3Q9H7E2 651 aaKnown RBP8.5□□□□□ -1.05
HMGN1-205ENST00000419378 ZNF70Q9UC06 446 aaPredicted RBP8.5□□□□□ -1.05
HMGN1-205ENST00000419378 NOP58Q9Y2X3 529 aaKnown RBP8.5□□□□□ -1.05
HMGN1-205ENST00000419378 PPP2R3BQ9Y5P8 575 aa8.5□□□□□ -1.05
HMGN1-205ENST00000419378 FAM155AB1AL88 458 aaPredicted RBP8.49□□□□□ -1.05
HMGN1-205ENST00000419378 EFSO43281 561 aa8.49□□□□□ -1.05
HMGN1-205ENST00000419378 XYLBO75191 536 aa8.49□□□□□ -1.05
HMGN1-205ENST00000419378 NF2P35240 595 aa8.49□□□□□ -1.05
HMGN1-205ENST00000419378 MAP2K2P36507 400 aa8.49□□□□□ -1.05
HMGN1-205ENST00000419378 MAPK8P45983 427 aa8.49□□□□□ -1.05
HMGN1-205ENST00000419378 ZNF157P51786 506 aaPredicted RBP8.49□□□□□ -1.05
HMGN1-205ENST00000419378 MAP2K1Q02750 393 aaPredicted RBP8.49□□□□□ -1.05
HMGN1-205ENST00000419378 NOGQ13253 232 aa8.49□□□□□ -1.05
HMGN1-205ENST00000419378 TNFAIP1Q13829 316 aa8.49□□□□□ -1.05
HMGN1-205ENST00000419378 PDE3AQ14432 1141 aa8.49□□□□□ -1.05
HMGN1-205ENST00000419378 RASA3Q14644 834 aa8.49□□□□□ -1.05
HMGN1-205ENST00000419378 TNNI3KQ59H18 835 aa8.49□□□□□ -1.05
HMGN1-205ENST00000419378 HHIPL2Q6UWX4 724 aa8.49□□□□□ -1.05
HMGN1-205ENST00000419378 GTPBP3Q969Y2 492 aaKnown RBP8.49□□□□□ -1.05
HMGN1-205ENST00000419378 ZDHHC15Q96MV8 337 aa8.49□□□□□ -1.05
HMGN1-205ENST00000419378 MRIQ9BWK5 157 aa8.49□□□□□ -1.05
HMGN1-205ENST00000419378 GPR108Q9NPR9 543 aa8.49□□□□□ -1.05
HMGN1-205ENST00000419378 ZBTB40Q9NUA8 1239 aa8.49□□□□□ -1.05
HMGN1-205ENST00000419378 KCNH4Q9UQ05 1017 aa8.49□□□□□ -1.05
HMGN1-205ENST00000419378 EXOC6BQ9Y2D4 811 aa8.49□□□□□ -1.05
HMGN1-205ENST00000419378 FNDC3AQ9Y2H6 1198 aaKnown RBP8.49□□□□□ -1.05
HMGN1-205ENST00000419378 FPGT-TNNI3KV9GXZ4 949 aa8.49□□□□□ -1.05
HMGN1-205ENST00000419378 TCP10L2B9ZVM9 353 aa8.48□□□□□ -1.05
HMGN1-205ENST00000419378 UBE2Q2LH0YL09 131 aa8.48□□□□□ -1.05
HMGN1-205ENST00000419378 FOXN1O15353 648 aa8.48□□□□□ -1.05
HMGN1-205ENST00000419378 BNIP3LO60238 219 aa8.48□□□□□ -1.05
HMGN1-205ENST00000419378 PPFIA3O75145 1194 aa8.48□□□□□ -1.05
HMGN1-205ENST00000419378 LDHBP07195 334 aaKnown RBP8.48□□□□□ -1.05
HMGN1-205ENST00000419378 CACNB3P54284 484 aa8.48□□□□□ -1.05
HMGN1-205ENST00000419378 TNP2Q05952 138 aa8.48□□□□□ -1.05
HMGN1-205ENST00000419378 GORABQ5T7V8 394 aa8.48□□□□□ -1.05
HMGN1-205ENST00000419378 APOBEC3HQ6NTF7 200 aaKnown RBP8.48□□□□□ -1.05
HMGN1-205ENST00000419378 RPAP2Q8IXW5 612 aaPredicted RBP8.48□□□□□ -1.05
HMGN1-205ENST00000419378 ZGPATQ8N5A5 531 aaKnown RBP8.48□□□□□ -1.05
HMGN1-205ENST00000419378 ABHD17AQ96GS6 310 aa8.48□□□□□ -1.05
HMGN1-205ENST00000419378 DBNDD2Q9BQY9 259 aa8.48□□□□□ -1.05
HMGN1-205ENST00000419378 HMG20BQ9P0W2 317 aa8.48□□□□□ -1.05
HMGN1-205ENST00000419378 HCN2Q9UL51 889 aa8.48□□□□□ -1.05
HMGN1-205ENST00000419378 DAGLAQ9Y4D2 1042 aa8.48□□□□□ -1.05
HMGN1-205ENST00000419378 UQCRFS1P1P0C7P4 283 aa8.47□□□□□ -1.05
HMGN1-205ENST00000419378 MAPTP10636 758 aaKnown RBP8.47□□□□□ -1.05
HMGN1-205ENST00000419378 TNNI2P48788 182 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms