RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 USP17L2Q6R6M4 530 aa16.44■□□□□ 0.22
HLA-DPA1-242ENST00000419277 DCAF4Q8WV16 495 aa16.44■□□□□ 0.22
HLA-DPA1-242ENST00000419277 VPS33BQ9H267 617 aa16.44■□□□□ 0.22
HLA-DPA1-242ENST00000419277 DDX4Q9NQI0 724 aaKnown RBP16.44■□□□□ 0.22
HLA-DPA1-242ENST00000419277 NYAP2Q9P242 653 aa16.44■□□□□ 0.22
HLA-DPA1-242ENST00000419277 RWDD2AQ9UIY3 292 aa16.44■□□□□ 0.22
HLA-DPA1-242ENST00000419277 A0A1B0GTH6 734 aa16.43■□□□□ 0.22
HLA-DPA1-242ENST00000419277 ENTPD3O75355 529 aa16.43■□□□□ 0.22
HLA-DPA1-242ENST00000419277 AKR1B1P15121 316 aa16.43■□□□□ 0.22
HLA-DPA1-242ENST00000419277 SYCP1Q15431 976 aa16.43■□□□□ 0.22
HLA-DPA1-242ENST00000419277 INF2Q27J81 1249 aa16.43■□□□□ 0.22
HLA-DPA1-242ENST00000419277 CDKAL1Q5VV42 579 aa16.43■□□□□ 0.22
HLA-DPA1-242ENST00000419277 RRAGBQ5VZM2 374 aa16.43■□□□□ 0.22
HLA-DPA1-242ENST00000419277 ISM2Q6H9L7 571 aa16.43■□□□□ 0.22
HLA-DPA1-242ENST00000419277 NYAP1Q6ZVC0 841 aa16.43■□□□□ 0.22
HLA-DPA1-242ENST00000419277 CCAR2Q8N163 923 aaKnown RBP16.43■□□□□ 0.22
HLA-DPA1-242ENST00000419277 KANSL2Q9H9L4 492 aa16.43■□□□□ 0.22
HLA-DPA1-242ENST00000419277 STK32BQ9NY57 414 aa16.43■□□□□ 0.22
HLA-DPA1-242ENST00000419277 ARHGAP6O43182 974 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 ECE2O60344 883 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 TNNT1P13805 278 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 VEGFAP15692 232 aaPredicted RBP16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 AFMP43652 599 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 TRAF1Q13077 416 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 PTPN14Q15678 1187 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 SLC15A2Q16348 729 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 TMEM266Q2M3C6 531 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 RASSF8Q8NHQ8 419 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 MTMR8Q96EF0 704 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 TRIM34Q9BYJ4 488 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 LRRC27Q9C0I9 530 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 RIC8AQ9NPQ8 531 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 KBTBD4Q9NVX7 518 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 ITIH6Q6UXX5 1313 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 USP17L5A8MUK1 530 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 RRP9O43818 475 aaKnown RBP16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 GOLGA8HP0CJ92 632 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 MRPL12P52815 198 aaKnown RBP16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 FMR1Q06787 632 aaKnown RBP eCLIP16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 PAK1Q13153 545 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 DOK7Q18PE1 504 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 NOM1Q5C9Z4 860 aaKnown RBP16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 PPP4R3AQ6IN85 833 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 ARMCX5Q6P1M9 558 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 TMEM179Q6ZVK1 233 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 HOMER1Q86YM7 354 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 CUL5Q93034 780 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 PIGSQ96S52 555 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 NAA15Q9BXJ9 866 aaKnown RBP16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 TMX1Q9H3N1 280 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 STK17AQ9UEE5 414 aa16.42■□□□□ 0.22
HLA-DPA1-242ENST00000419277 F8W031 263 aaPredicted RBP16.41■□□□□ 0.22
HLA-DPA1-242ENST00000419277 ZBTB5O15062 677 aa16.41■□□□□ 0.22
HLA-DPA1-242ENST00000419277 STX10O60499 249 aa16.41■□□□□ 0.22
HLA-DPA1-242ENST00000419277 RPN1P04843 607 aaKnown RBP16.41■□□□□ 0.22
HLA-DPA1-242ENST00000419277 FXR2P51116 673 aaKnown RBP eCLIP16.41■□□□□ 0.22
HLA-DPA1-242ENST00000419277 TRIM14Q14142 442 aa16.41■□□□□ 0.22
HLA-DPA1-242ENST00000419277 IL17AQ16552 155 aa16.41■□□□□ 0.22
HLA-DPA1-242ENST00000419277 COBLL1Q53SF7 1204 aa16.41■□□□□ 0.22
HLA-DPA1-242ENST00000419277 C17orf53Q8N3J3 647 aaPredicted RBP16.41■□□□□ 0.22
HLA-DPA1-242ENST00000419277 IGSF22Q8N9C0 903 aa16.41■□□□□ 0.22
HLA-DPA1-242ENST00000419277 NOC3LQ8WTT2 800 aaKnown RBP16.41■□□□□ 0.22
HLA-DPA1-242ENST00000419277 C16orf45Q96MC5 204 aaPredicted RBP16.41■□□□□ 0.22
HLA-DPA1-242ENST00000419277 PPP1R3GB7ZBB8 358 aa16.4■□□□□ 0.22
HLA-DPA1-242ENST00000419277 ZSCAN12O43309 604 aa16.4■□□□□ 0.22
HLA-DPA1-242ENST00000419277 CCNT1O60563 726 aaKnown RBP16.4■□□□□ 0.22
HLA-DPA1-242ENST00000419277 RHOBTB3O94955 611 aa16.4■□□□□ 0.22
HLA-DPA1-242ENST00000419277 MMP14P50281 582 aa16.4■□□□□ 0.22
HLA-DPA1-242ENST00000419277 TBX2Q13207 712 aaPredicted RBP16.4■□□□□ 0.22
HLA-DPA1-242ENST00000419277 PDIA5Q14554 519 aa16.4■□□□□ 0.22
HLA-DPA1-242ENST00000419277 TATDN1Q6P1N9 297 aa16.4■□□□□ 0.22
HLA-DPA1-242ENST00000419277 GRAMD1CQ8IYS0 662 aa16.4■□□□□ 0.22
HLA-DPA1-242ENST00000419277 C7orf43Q8WVR3 580 aa16.4■□□□□ 0.22
HLA-DPA1-242ENST00000419277 CCDC51Q96ER9 411 aa16.4■□□□□ 0.22
HLA-DPA1-242ENST00000419277 CALML4Q96GE6 196 aa16.4■□□□□ 0.22
HLA-DPA1-242ENST00000419277 KIF13BQ9NQT8 1826 aa16.4■□□□□ 0.22
HLA-DPA1-242ENST00000419277 LRRC10BA6NIK2 292 aa16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 TPM1P09493 284 aa16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 NR1I3Q14994 352 aa16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 LETM2Q2VYF4 491 aa16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 MOXD1Q6UVY6 613 aa16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 RTKN2Q8IZC4 609 aa16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 GMCL1P1Q8NEA9 526 aa16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 RASGRP4Q8TDF6 673 aa16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 TBCKQ8TEA7 893 aa16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 DBNDD1Q9H9R9 158 aa16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 HERC5Q9UII4 1024 aaKnown RBP16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 H7C1D1 291 aa16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 PSMA7O14818 248 aa16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 SCNN1DP51172 638 aa16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 AP3B2Q13367 1082 aa16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 CERKLQ49MI3 558 aaPredicted RBP16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 CEP135Q66GS9 1140 aa16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 FOXR2Q6PJQ5 311 aa16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 CABP7Q86V35 215 aa16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 LRRC47Q8N1G4 583 aaKnown RBP16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 KIF18AQ8NI77 898 aa16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 PSMD1Q99460 953 aa16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 TMOD2Q9NZR1 351 aa16.39■□□□□ 0.21
HLA-DPA1-242ENST00000419277 BICDL2A1A5D9 508 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms