RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 KLHL7Q8IXQ5 586 aa14.77□□□□□ -0.05
TNFRSF8-203ENST00000417814 TXLNBQ8N3L3 684 aa14.77□□□□□ -0.05
TNFRSF8-203ENST00000417814 MS4A14Q96JA4 679 aa14.77□□□□□ -0.05
TNFRSF8-203ENST00000417814 SAR1BQ9Y6B6 198 aa14.77□□□□□ -0.05
TNFRSF8-203ENST00000417814 FMN2Q9NZ56 1722 aa14.76□□□□□ -0.05
TNFRSF8-203ENST00000417814 SMIM23A6NLE4 172 aa14.76□□□□□ -0.05
TNFRSF8-203ENST00000417814 HPDP32754 393 aaPredicted RBP14.76□□□□□ -0.05
TNFRSF8-203ENST00000417814 RASSF7Q02833 373 aa14.76□□□□□ -0.05
TNFRSF8-203ENST00000417814 GRIK5Q16478 980 aa14.76□□□□□ -0.05
TNFRSF8-203ENST00000417814 CCDC40Q4G0X9 1142 aa14.76□□□□□ -0.05
TNFRSF8-203ENST00000417814 TMTC1Q8IUR5 882 aa14.76□□□□□ -0.05
TNFRSF8-203ENST00000417814 MICALL1Q8N3F8 863 aa14.76□□□□□ -0.05
TNFRSF8-203ENST00000417814 HDAC7Q8WUI4 952 aa14.76□□□□□ -0.05
TNFRSF8-203ENST00000417814 NLRP3Q96P20 1036 aa14.76□□□□□ -0.05
TNFRSF8-203ENST00000417814 RNF26Q9BY78 433 aaPredicted RBP14.76□□□□□ -0.05
TNFRSF8-203ENST00000417814 HGSO14964 777 aaPredicted RBP14.76□□□□□ -0.05
TNFRSF8-203ENST00000417814 TAL1P17542 331 aaPredicted RBP14.76□□□□□ -0.05
TNFRSF8-203ENST00000417814 RBM5P52756 815 aaKnown RBP eCLIP14.76□□□□□ -0.05
TNFRSF8-203ENST00000417814 CABP7Q86V35 215 aa14.76□□□□□ -0.05
TNFRSF8-203ENST00000417814 SH3RF3Q8TEJ3 882 aaPredicted RBP14.76□□□□□ -0.05
TNFRSF8-203ENST00000417814 MINPP1Q9UNW1 487 aa14.76□□□□□ -0.05
TNFRSF8-203ENST00000417814 NFAT5O94916 1531 aa14.76□□□□□ -0.05
TNFRSF8-203ENST00000417814 KLRF2D3W0D1 207 aa14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 PRPF4BQ13523 1007 aaKnown RBP14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 E2F4Q16254 413 aa14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 TXNRD1Q16881 649 aa14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 GLIS3Q8NEA6 775 aa14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 SETDB2Q96T68 719 aa14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 DCP1AQ9NPI6 582 aaPredicted RBP14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 SMCO2A6NFE2 343 aa14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 RNF40O75150 1001 aa14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 ZRANB2O95218 330 aaKnown RBP eCLIP14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 FTCDO95954 541 aa14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 RPS8P62241 208 aaKnown RBP14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 TROAPQ12815 778 aa14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 UBE2SQ16763 222 aa14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 NFRKBQ6P4R8 1299 aa14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 TMTC3Q6ZXV5 915 aa14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 BMP2KQ9NSY1 1161 aaPredicted RBP14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 CWC15Q9P013 229 aaKnown RBP14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 RCCD1A6NED2 376 aa14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 H0YHG0 523 aa14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 TRAF5O00463 557 aa14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 LIG3P49916 1009 aa14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 CNOT6LQ96LI5 555 aaKnown RBP14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 SEC63Q9UGP8 760 aaKnown RBP14.75□□□□□ -0.05
TNFRSF8-203ENST00000417814 ERCC5P28715 1186 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF8-203ENST00000417814 TCP10Q12799 353 aa14.74□□□□□ -0.05
TNFRSF8-203ENST00000417814 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.74□□□□□ -0.05
TNFRSF8-203ENST00000417814 GSDMAQ96QA5 445 aa14.74□□□□□ -0.05
TNFRSF8-203ENST00000417814 FEZ2Q9UHY8 353 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF8-203ENST00000417814 RTL9Q8NET4 1388 aa14.74□□□□□ -0.05
TNFRSF8-203ENST00000417814 KIF5BP33176 963 aa14.74□□□□□ -0.05
TNFRSF8-203ENST00000417814 NAA35Q5VZE5 725 aa14.74□□□□□ -0.05
TNFRSF8-203ENST00000417814 SH2D3CQ8N5H7 860 aa14.74□□□□□ -0.05
TNFRSF8-203ENST00000417814 PIGSQ96S52 555 aa14.74□□□□□ -0.05
TNFRSF8-203ENST00000417814 MYO1CO00159 1063 aa14.74□□□□□ -0.05
TNFRSF8-203ENST00000417814 CCT5P48643 541 aa14.74□□□□□ -0.05
TNFRSF8-203ENST00000417814 CACNB3P54284 484 aa14.74□□□□□ -0.05
TNFRSF8-203ENST00000417814 MAEAQ7L5Y9 396 aa14.74□□□□□ -0.05
TNFRSF8-203ENST00000417814 PHF20Q9BVI0 1012 aa14.74□□□□□ -0.05
TNFRSF8-203ENST00000417814 TTF2Q9UNY4 1162 aaKnown RBP14.74□□□□□ -0.05
TNFRSF8-203ENST00000417814 ZSCAN5CA6NGD5 496 aaPredicted RBP14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 KRT86O43790 486 aa14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 LDHBP07195 334 aaKnown RBP14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 GGCXP38435 758 aa14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 SCNN1DP51172 638 aa14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 MAP9Q49MG5 647 aa14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 ANKRD40Q6AI12 368 aa14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 CCDC70Q6NSX1 233 aa14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 GPATCH11Q8N954 259 aa14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 UHMK1Q8TAS1 419 aaKnown RBP14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 FERMT2Q96AC1 680 aa14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 NHEJ1Q9H9Q4 299 aaPredicted RBP14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 HYOU1Q9Y4L1 999 aa14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 MYBL2P10244 700 aa14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 TBX2Q13207 712 aaPredicted RBP14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 RAPGEF1Q13905 1077 aa14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 RNF187Q5TA31 235 aaPredicted RBP14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 TBC1D9BQ66K14 1250 aa14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 MAATS1Q7Z4T9 603 aa14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 RASSF4Q9H2L5 321 aa14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 RIC1Q4ADV7 1423 aa14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 MEIS1O00470 390 aa14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 RRP36Q96EU6 259 aaKnown RBP14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 C8orf37Q96NL8 207 aa14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 IFIH1Q9BYX4 1025 aaKnown RBP14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 PKD2L1Q9P0L9 805 aa14.73□□□□□ -0.05
TNFRSF8-203ENST00000417814 CCDC151A5D8V7 595 aa14.72□□□□□ -0.05
TNFRSF8-203ENST00000417814 GTPBP6O43824 516 aaPredicted RBP14.72□□□□□ -0.05
TNFRSF8-203ENST00000417814 COG1Q8WTW3 980 aa14.72□□□□□ -0.05
TNFRSF8-203ENST00000417814 RRP15Q9Y3B9 282 aaKnown RBP14.72□□□□□ -0.05
TNFRSF8-203ENST00000417814 PRPF3O43395 683 aaKnown RBP14.72□□□□□ -0.05
TNFRSF8-203ENST00000417814 GFPT1Q06210 699 aaPredicted RBP14.72□□□□□ -0.05
TNFRSF8-203ENST00000417814 TRIM28Q13263 835 aaKnown RBP14.72□□□□□ -0.05
TNFRSF8-203ENST00000417814 ODF2Q5BJF6 829 aa14.72□□□□□ -0.05
TNFRSF8-203ENST00000417814 MB21D1Q8N884 522 aa14.72□□□□□ -0.05
TNFRSF8-203ENST00000417814 TBCKQ8TEA7 893 aa14.72□□□□□ -0.05
TNFRSF8-203ENST00000417814 MXD3Q9BW11 206 aa14.72□□□□□ -0.05
TNFRSF8-203ENST00000417814 FGFR2P21802 821 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms