RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 TSGA10Q9BZW7 698 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 NOP53Q9NZM5 478 aaKnown RBP7.12□□□□□ -1.27
CCNT1-202ENST00000417344 ANAPC4Q9UJX5 808 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 GUCA1BQ9UMX6 200 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 G3BP2Q9UN86 482 aaKnown RBP7.12□□□□□ -1.27
CCNT1-202ENST00000417344 OVOS2A0A0G2JMS6 1433 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 OVOS2A0A0J9YW53 1432 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 CRB1P82279 1406 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 OVOS2Q6IE36 1432 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 PXDNLA1KZ92 1463 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 ABCC1P33527 1531 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 B4DLN1 442 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 TAF5LO75529 589 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 LUC7L3O95232 432 aaKnown RBP7.11□□□□□ -1.27
CCNT1-202ENST00000417344 KIF4AO95239 1232 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 GNAT1P11488 350 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 ATP4AP20648 1035 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 ABCD1P33897 745 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 PBX1P40424 430 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 RIPK1Q13546 671 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 FBXO31Q5XUX0 539 aaPredicted RBP7.11□□□□□ -1.27
CCNT1-202ENST00000417344 PPP4R3AQ6IN85 833 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 HIBCHQ6NVY1 386 aaPredicted RBP7.11□□□□□ -1.27
CCNT1-202ENST00000417344 MTHFD1LQ6UB35 978 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 CYP26C1Q6V0L0 522 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 TRMT44Q8IYL2 757 aaKnown RBP7.11□□□□□ -1.27
CCNT1-202ENST00000417344 CCDC170Q8IYT3 715 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 ZFAND2BQ8WV99 257 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 FSD1Q9BTV5 496 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 POLD4Q9HCU8 107 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 PPANQ9NQ55 473 aaKnown RBP7.11□□□□□ -1.27
CCNT1-202ENST00000417344 SAMSN1Q9NSI8 373 aaKnown RBP7.11□□□□□ -1.27
CCNT1-202ENST00000417344 SLC5A4Q9NY91 659 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 ZFATQ9P243 1243 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 TSPYL4Q9UJ04 414 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 ZMYM6O95789 1325 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 KDRP35968 1356 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 MROH1Q8NDA8 1641 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 FAM237AA0A1B0GTK4 181 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 GMNCA6NCL1 334 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 CFAP99D6REC4 459 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 ZSCAN9O15535 394 aaPredicted RBP7.11□□□□□ -1.27
CCNT1-202ENST00000417344 RNF8O76064 485 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 GYPCP04921 128 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 MARCKSP29966 332 aaPredicted RBP7.11□□□□□ -1.27
CCNT1-202ENST00000417344 FXR1P51114 621 aaKnown RBP eCLIP7.11□□□□□ -1.27
CCNT1-202ENST00000417344 USP4Q13107 963 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 G3BP1Q13283 466 aaKnown RBP eCLIP7.11□□□□□ -1.27
CCNT1-202ENST00000417344 SLC39A14Q15043 492 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 PPP1R7Q15435 360 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 GNPTABQ3T906 1256 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 GLE1Q53GS7 698 aaKnown RBP7.11□□□□□ -1.27
CCNT1-202ENST00000417344 CCDC102BQ68D86 513 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 SHC4Q6S5L8 630 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 APTXQ7Z2E3 356 aaKnown RBP7.11□□□□□ -1.27
CCNT1-202ENST00000417344 GALNT15Q8N3T1 639 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 MMGT1Q8N4V1 131 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 MLKLQ8NB16 471 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 TBC1D5Q92609 795 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 CNKSR1Q969H4 720 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 AIDAQ96BJ3 306 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 HVCN1Q96D96 273 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 SEC16BQ96JE7 1060 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 HINFPQ9BQA5 517 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 SLF1Q9BQI6 1058 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 MMTAG2Q9BU76 263 aaKnown RBP7.11□□□□□ -1.27
CCNT1-202ENST00000417344 HAUS4Q9H6D7 363 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 NCOA5Q9HCD5 579 aaKnown RBP7.11□□□□□ -1.27
CCNT1-202ENST00000417344 ABHD10Q9NUJ1 306 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 CABP1Q9NZU7 370 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 TRIM10Q9UDY6 481 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 LEMD3Q9Y2U8 911 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 L3MBTL1Q9Y468 752 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 KIF20BQ96Q89 1820 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 UBN2Q6ZU65 1347 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 NEXMIFQ5QGS0 1516 aa7.11□□□□□ -1.27
CCNT1-202ENST00000417344 ZNF233A6NK53 670 aa7.1□□□□□ -1.27
CCNT1-202ENST00000417344 HMGB1P1B2RPK0 211 aaPredicted RBP7.1□□□□□ -1.27
CCNT1-202ENST00000417344 PDE2AO00408 941 aaPredicted RBP7.1□□□□□ -1.27
CCNT1-202ENST00000417344 DIAPH2O60879 1101 aa7.1□□□□□ -1.27
CCNT1-202ENST00000417344 ATP2C2O75185 946 aa7.1□□□□□ -1.27
CCNT1-202ENST00000417344 SMIM24O75264 130 aa7.1□□□□□ -1.27
CCNT1-202ENST00000417344 ECEL1O95672 775 aa7.1□□□□□ -1.27
CCNT1-202ENST00000417344 HMGB1P09429 215 aaKnown RBP7.1□□□□□ -1.27
CCNT1-202ENST00000417344 FDPSP14324 419 aaKnown RBP7.1□□□□□ -1.27
CCNT1-202ENST00000417344 EIF2S2P20042 333 aaKnown RBP7.1□□□□□ -1.27
CCNT1-202ENST00000417344 CTCFP49711 727 aaPredicted RBP7.1□□□□□ -1.27
CCNT1-202ENST00000417344 ITGB3BPQ13352 177 aaPredicted RBP7.1□□□□□ -1.27
CCNT1-202ENST00000417344 LONRF3Q496Y0 759 aa7.1□□□□□ -1.27
CCNT1-202ENST00000417344 LRRC23Q53EV4 343 aaPredicted RBP7.1□□□□□ -1.27
CCNT1-202ENST00000417344 OTUD7BQ6GQQ9 843 aa7.1□□□□□ -1.27
CCNT1-202ENST00000417344 ARMC9Q7Z3E5 817 aa7.1□□□□□ -1.27
CCNT1-202ENST00000417344 SDCCAG8Q86SQ7 713 aaPredicted RBP7.1□□□□□ -1.27
CCNT1-202ENST00000417344 CACNA2D3Q8IZS8 1091 aa7.1□□□□□ -1.27
CCNT1-202ENST00000417344 C1orf131Q8NDD1 294 aaKnown RBP7.1□□□□□ -1.27
CCNT1-202ENST00000417344 HDAC7Q8WUI4 952 aa7.1□□□□□ -1.27
CCNT1-202ENST00000417344 CCT6BQ92526 530 aa7.1□□□□□ -1.27
CCNT1-202ENST00000417344 PLEKHG4BQ96PX9 1271 aa7.1□□□□□ -1.27
CCNT1-202ENST00000417344 GORASP1Q9BQQ3 440 aa7.1□□□□□ -1.27
CCNT1-202ENST00000417344 DMGDHQ9UI17 866 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms